Rorug04G0362800

Short-chain dehydrogenase reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0015203
Physical Location & Seq
Reverse (-)
53532303 .. 53535229
2927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0362800.1

Sequence Viewer

Length: 1497 bp
ATGCCTCCAATCTTGCCGGACTTCTCCAACTCCGTCAAGCTCAAGTATGTCAAACTCGGGTACCAATACCTCGTGAACCATTTCCTCACCCTCGCTCTAGTTCCTATAATGGCCGGGATTTTTCTCGAGGTTCTACGCATCGGCCCGGAGGAGGTTCTAAACTTGTGGACCTCCCTCCACTTGGATCTCGTCCAAATCCTCTGCTCCTCTTTCCTCATCATATTCATCGCCACCGTCTACTTCATGTCTAAGCCACGAACCATCTACCTCGTCGACTACGCTTGCTACAAGCCACCTGTTACCTGCCGCGTCCCCTTCTCCACATTTATGGAACACTCCCGCCTCATCCTCAGCAACAACCCTAAGAGCGTCGAGTTCCAGATGAGGATCCTCGAGCGCTCTGGTCTTGGGGAAGAAACTTGCCTTCCCCCAGCCATTCACTACATCCCTCCCCAACCCACCATGGAGGCTGCGAGGGGCGAGGCGGAGCTCGTCATATTCTCCGCAATGGACTCTCTATTTGAGAAGACCGGCCTTAAACCTAAAGACATAGATATTCTGATCGTCAATTGCAGCCTGTTCTCGCCGACTCCTTCTTTGTCGGCGATGGTGATCAACAAGTACAAGCTCCGAAGTAACATCCGGAGCTTCAACTTGTCCGGCATGGGGTGCAGCGCCGGTCTCATATCCATCGACTTGGCACGTGACCTTCTTCAGGTTCATCCTAACTCAAATGCGGTGGTGGTCAGTACGGAGATCATAACTCCGAATTATTACCAAGGAAAAGAGAGGGCTATGCTTTTGCCCAACTGCCTCTTCCGTATGGGTGGGGCCGCCATACTCTTGTCCAACCGTAGATCCGAGAGCCGACGTGCCAAGTACAGGTTGGTCCACGTGGTCCGAACCCACAAGGGAGCCGACGACAAGGCCTACCGCTGCGTGTTCGAGGAGGAAGACAGGGAGGGCAAGGTCGGAATTTCACTCCAAAAAGATCTGATGGCCATCGCCGGCGAGGCCCTGAAATCCAACATCACCACTATCGGTCCTCTAGTACTTCCGGCGTCGGAGCAGCTCCTCTTCCTGCTAACCCTCATCGGAAGAAAGATAGTGAACCCCAAGTGGAAGCCTTACATTCCAGACTTCAAGCAGGCGTTCGAGCACTTCTGCATCCACGCTGGAGGTCGAGCCGTTATCGACGAGCTTCAGAAGAATCTACAGTTGTCGGCGGAGCACTGCGAGGCGTCGAGGATGACGCTGCACAGGTTCGGCAATACGTCGTCGTCTTCGCTTTGGTACGAGTTGGGGTACATTGAGGCCAAGGGGAGGATGAGGAAGGGAGATAGGGTTTGGCAGATTGCGTTTGGGAGTGGGTTTAAGTGCAACAGCGCCGTGTGGAAGTGTAACCGGACCATCAAGACGGCGGCTAATGATGATGGGCCCTGGGCCGATTGCATTGAAAGGTACCCGGTTCATATTCCTGAAGTCGTCAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

498

Amino Acids

56.05

Weight (kDa)

8.96

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 80 - 368 9.1e-139 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 386 - 466 7.1e-12 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 388 - 459 9.9e-09 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015203)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G42960
fragaria_vesca FvH4_4g35960
malus_domestica MD13G1013400.v1.1 MD16G1010300.v1.1
prunus_persica Prupe.1G340300_v2.0.a1
pyrus_communis pycom16g01010
rosa_laevigata RLG00000005727
rosa_multiflora Rmu_ssc0000107.1_g000001 Rmu_ssc0000253.1_g000009
rosa_roxburghii Rroxscaffold_5G00386070
rosa_rugosa Rorug04G0362800
rosa_samantha Rh4AG424200 Rh4BG436300 Rh4CG450900 Rh4DG432800
rosa_wichuraiana Rw4G036370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 311
Acc65I GGTACC 2 cut(s) 60, 1461
AccB1I GGYRCC 2 cut(s) 60, 1461
AccI GTMKAC 2 cut(s) 237, 273
AccII CGCG 1 cut(s) 309
AccIII TCCGGA 1 cut(s) 642
AciI CCGC 9 cut(s) 307, 340, 485, 504, 737, 834, 934, 1226, 1421
AclWI GGATC 4 cut(s) 192, 382, 395, 852
AcoI YGGCCR 2 cut(s) 111, 999
AcsI RAATTY 1 cut(s) 975
AcuI CTGAAG 2 cut(s) 698, 1187
AcvI CACGTG 2 cut(s) 704, 895
AcyI GRCGYC 2 cut(s) 1061, 1241
AfaI GTAC 8 cut(s) 62, 623, 751, 881, 1053, 1295, 1307, 1463
AfeI AGCGCT 1 cut(s) 398
AfiI CCNNNNNNNGG 6 cut(s) 151, 181, 666, 715, 882, 1323
AgsI TTSAA 3 cut(s) 652, 1144, 1457
AjiI CACGTC 1 cut(s) 872
AjnI CCWGG 1 cut(s) 1439
AjuI GAANNNNNNNTTGG 2 cut(s) 800, 832
AluBI AGCT 6 cut(s) 40, 490, 628, 648, 1072, 1201
AluI AGCT 6 cut(s) 40, 490, 628, 648, 1072, 1201
Alw21I GWGCWC 3 cut(s) 492, 1161, 1233
Alw26I GTCTC 1 cut(s) 686
AlwI GGATC 4 cut(s) 192, 382, 395, 852
Ama87I CYCGRG 3 cut(s) 56, 125, 392
Aor13HI TCCGGA 1 cut(s) 642
Aor51HI AGCGCT 1 cut(s) 398
ApaI GGGCCC 1 cut(s) 1440
ApeKI GCWGC 6 cut(s) 470, 573, 672, 936, 1069, 1255
ApoI RAATTY 1 cut(s) 975
ArsI GACNNNNNNTTYG 4 cut(s) 503, 535, 580, 612
Asp700I GAANNNNTTC 1 cut(s) 80
Asp718I GGTACC 2 cut(s) 60, 1461
AspLEI GCGC 3 cut(s) 399, 677, 1388
AsuC2I CCSGG 3 cut(s) 115, 146, 1466
AsuHPI GGTGA 3 cut(s) 79, 622, 1024
AvaI CYCGRG 3 cut(s) 56, 125, 392
AvaII GGWCC 5 cut(s) 168, 889, 898, 1043, 1407
BaeGI GKGCMC 1 cut(s) 1440
BaeI ACNNNNGTAYC 2 cut(s) 44, 77
BalI TGGCCA 1 cut(s) 1001
BamHI GGATCC 1 cut(s) 387
BanI GGYRCC 2 cut(s) 60, 1461
BanII GRGCYC 2 cut(s) 492, 1440
BauI CACGAG 1 cut(s) 71
BbrPI CACGTG 2 cut(s) 704, 895
BbsI GAAGAC 3 cut(s) 533, 960, 1275
Bbv12I GWGCWC 3 cut(s) 492, 1161, 1233
BbvCI CCTCAGC 1 cut(s) 350
BbvI GCAGC 6 cut(s) 457, 585, 684, 923, 1081, 1242
BccI CCATC 7 cut(s) 269, 601, 698, 991, 1010, 1418, 1427
BceAI ACGGC 3 cut(s) 1172, 1373, 1434
BciT130I CCWGG 1 cut(s) 1441
BclI TGATCA 1 cut(s) 612
BcnI CCSGG 3 cut(s) 115, 146, 1466
BcoDI GTCTC 1 cut(s) 686
BfaI CTAG 3 cut(s) 98, 1049, 1495
BfmI CTRYAG 1 cut(s) 1214
BfoI RGCGCY 3 cut(s) 400, 678, 1389
BfuAI ACCTGC 1 cut(s) 311
BglI GCCNNNNNGGC 1 cut(s) 1013
BglII AGATCT 1 cut(s) 991
BisI GCNGC 9 cut(s) 307, 471, 574, 673, 834, 937, 1070, 1256, 1422
BlsI GCNGC 9 cut(s) 308, 472, 575, 674, 835, 938, 1071, 1257, 1423
BmcAI AGTACT 1 cut(s) 1053
Bme1390I CCNGG 4 cut(s) 115, 146, 1441, 1466
Bme18I GGWCC 5 cut(s) 168, 889, 898, 1043, 1407
BmeT110I CYCGRG 3 cut(s) 56, 125, 392
BmgBI CACGTC 1 cut(s) 872
BmiI GGNNCC 6 cut(s) 62, 389, 832, 916, 1438, 1463
BmrFI CCNGG 4 cut(s) 115, 146, 1441, 1466
BmsI GCATC 2 cut(s) 147, 1176
BpiI GAAGAC 3 cut(s) 533, 960, 1275
BpmI CTGGAG 1 cut(s) 1197
Bpu10I CCTNAGC 1 cut(s) 350
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 3 cut(s) 115, 146, 1466
BsaAI YACGTR 2 cut(s) 704, 895
BsaBI GATNNNNATC 3 cut(s) 386, 611, 1001
BsaHI GRCGYC 2 cut(s) 1061, 1241
BsaI GGTCTC 1 cut(s) 686
BsaJI CCNNGG 5 cut(s) 462, 778, 1317, 1439, 1440
BsaWI WCCGGW 2 cut(s) 642, 1404
BsaXI ACNNNNNCTCC 2 cut(s) 1329, 1359
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 181, 666, 715, 882, 1323
Bse118I RCCGGY 3 cut(s) 530, 677, 1007
Bse3DI GCAATG 1 cut(s) 513
Bse8I GATNNNNATC 3 cut(s) 386, 611, 1001
BseAI TCCGGA 1 cut(s) 642
BseBI CCWGG 1 cut(s) 1441
BseDI CCNNGG 5 cut(s) 462, 778, 1317, 1439, 1440
BseGI GGATG 7 cut(s) 345, 444, 639, 721, 1167, 1254, 1332
BseJI GATNNNNATC 3 cut(s) 386, 611, 1001
BseLI CCNNNNNNNGG 6 cut(s) 151, 181, 666, 715, 882, 1323
BseMI GCAATG 1 cut(s) 513
BseMII CTCAG 1 cut(s) 364
BseRI GAGGAG 4 cut(s) 164, 196, 962, 1064
BseSI GKGCMC 1 cut(s) 1440
BseXI GCAGC 6 cut(s) 457, 585, 684, 923, 1081, 1242
BseYI CCCAGC 1 cut(s) 430
BsgI GTGCAG 2 cut(s) 691, 1241
Bsh1236I CGCG 1 cut(s) 309
BshNI GGYRCC 2 cut(s) 60, 1461
BsiHKAI GWGCWC 3 cut(s) 492, 1161, 1233
BsiHKCI CYCGRG 3 cut(s) 56, 125, 392
BslFI GGGAC 1 cut(s) 296
BslI CCNNNNNNNGG 6 cut(s) 151, 181, 666, 715, 882, 1323
BsmAI GTCTC 1 cut(s) 686
BsmFI GGGAC 1 cut(s) 296
Bso31I GGTCTC 1 cut(s) 686
BsoBI CYCGRG 3 cut(s) 56, 125, 392
Bsp120I GGGCCC 1 cut(s) 1436
Bsp1286I GDGCHC 4 cut(s) 492, 1161, 1233, 1440
Bsp13I TCCGGA 1 cut(s) 642
Bsp143I GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
Bsp19I CCATGG 1 cut(s) 462
BspACI CCGC 9 cut(s) 307, 340, 485, 504, 737, 834, 934, 1226, 1421
BspCNI CTCAG 1 cut(s) 363
BspEI TCCGGA 1 cut(s) 642
BspFNI CGCG 1 cut(s) 309
BspLI GGNNCC 6 cut(s) 62, 389, 832, 916, 1438, 1463
BspMI ACCTGC 1 cut(s) 311
BspPI GGATC 4 cut(s) 192, 382, 395, 852
BspT107I GGYRCC 2 cut(s) 60, 1461
BspTNI GGTCTC 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 513
BsrFI RCCGGY 3 cut(s) 530, 677, 1007
BssAI RCCGGY 3 cut(s) 530, 677, 1007
BssECI CCNNGG 5 cut(s) 462, 778, 1317, 1439, 1440
BssMI GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
BssNI GRCGYC 2 cut(s) 1061, 1241
BssSI CACGAG 1 cut(s) 71
BssT1I CCWWGG 3 cut(s) 462, 778, 1317
Bst2BI CACGAG 1 cut(s) 71
Bst2UI CCWGG 1 cut(s) 1441
Bst4CI ACNGT 3 cut(s) 235, 854, 1218
Bst6I CTCTTC 2 cut(s) 821, 1082
BstACI GRCGYC 2 cut(s) 1061, 1241
BstAPI GCANNNNNTGC 1 cut(s) 669
BstBAI YACGTR 2 cut(s) 704, 895
BstC8I GCNNGC 3 cut(s) 283, 1009, 1149
BstDEI CTNAG 3 cut(s) 249, 350, 363
BstDSI CCRYGG 1 cut(s) 462
BstENI CCTNNNNNAGG 1 cut(s) 713
BstF5I GGATG 7 cut(s) 345, 444, 639, 721, 1167, 1254, 1332
BstFNI CGCG 1 cut(s) 309
BstH2I RGCGCY 3 cut(s) 400, 678, 1389
BstHHI GCGC 3 cut(s) 399, 677, 1388
BstKTI GATC 7 cut(s) 187, 390, 564, 615, 759, 860, 994
BstMAI GTCTC 1 cut(s) 686
BstMBI GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
BstMWI GCNNNNNNNGC 2 cut(s) 669, 1013
BstNI CCWGG 1 cut(s) 1441
BstSCI CCNGG 4 cut(s) 113, 144, 1439, 1464
BstSFI CTRYAG 1 cut(s) 1214
BstSLI GKGCMC 1 cut(s) 1440
BstUI CGCG 1 cut(s) 309
BstV1I GCAGC 6 cut(s) 457, 585, 684, 923, 1081, 1242
BstV2I GAAGAC 3 cut(s) 533, 960, 1275
BstX2I RGATCY 4 cut(s) 184, 387, 857, 991
BstXI CCANNNNNNTGG 2 cut(s) 328, 697
BstYI RGATCY 4 cut(s) 184, 387, 857, 991
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 3 cut(s) 211, 620, 988
BtrI CACGTC 1 cut(s) 872
BtsCI GGATG 7 cut(s) 345, 444, 639, 721, 1167, 1254, 1332
BtsI GCAGTG 1 cut(s) 1231
BtsIMutI CAGTG 1 cut(s) 1231
BveI ACCTGC 1 cut(s) 311
Cac8I GCNNGC 3 cut(s) 283, 1009, 1149
CfoI GCGC 3 cut(s) 399, 677, 1388
Cfr10I RCCGGY 3 cut(s) 530, 677, 1007
CseI GACGC 5 cut(s) 298, 358, 1050, 1230, 1261
Csp6I GTAC 8 cut(s) 61, 622, 750, 880, 1052, 1294, 1306, 1462
CspCI CAANNNNNGTGG 2 cut(s) 720, 755
CviAII CATG 3 cut(s) 244, 463, 664
CviQI GTAC 8 cut(s) 61, 622, 750, 880, 1052, 1294, 1306, 1462
DdeI CTNAG 3 cut(s) 249, 350, 363
DpnI GATC 7 cut(s) 186, 389, 563, 614, 758, 859, 993
DpnII GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
EaeI YGGCCR 2 cut(s) 111, 999
Eam1104I CTCTTC 2 cut(s) 821, 1082
EarI CTCTTC 2 cut(s) 821, 1082
EciI GGCGGA 2 cut(s) 500, 1241
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 3 cut(s) 462, 778, 1317
Eco147I AGGCCT 1 cut(s) 929
Eco24I GRGCYC 2 cut(s) 492, 1440
Eco31I GGTCTC 1 cut(s) 686
Eco47I GGWCC 5 cut(s) 168, 889, 898, 1043, 1407
Eco47III AGCGCT 1 cut(s) 398
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 2 cut(s) 698, 1187
Eco72I CACGTG 2 cut(s) 704, 895
Eco88I CYCGRG 3 cut(s) 56, 125, 392
EcoICRI GAGCTC 1 cut(s) 490
EcoNI CCTNNNNNAGG 1 cut(s) 713
EcoO109I RGGNCCY 2 cut(s) 1015, 1437
EcoRII CCWGG 1 cut(s) 1439
EcoT14I CCWWGG 3 cut(s) 462, 778, 1317
EcoT38I GRGCYC 2 cut(s) 492, 1440
ErhI CCWWGG 3 cut(s) 462, 778, 1317
FaeI CATG 3 cut(s) 247, 466, 667
FaqI GGGAC 1 cut(s) 296
FatI CATG 3 cut(s) 243, 462, 663
FauI CCCGC 1 cut(s) 347
FbaI TGATCA 1 cut(s) 612
FblI GTMKAC 2 cut(s) 237, 273
Fnu4HI GCNGC 9 cut(s) 307, 471, 574, 673, 834, 937, 1070, 1256, 1422
FokI GGATG 7 cut(s) 332, 431, 626, 708, 1154, 1261, 1339
FriOI GRGCYC 2 cut(s) 492, 1440
Fsp4HI GCNGC 9 cut(s) 307, 471, 574, 673, 834, 937, 1070, 1256, 1422
FspBI CTAG 3 cut(s) 98, 1049, 1495
GlaI GCGC 3 cut(s) 398, 676, 1387
GluI GCNGC 9 cut(s) 307, 471, 574, 673, 834, 937, 1070, 1256, 1422
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 1 cut(s) 1197
HaeII RGCGCY 3 cut(s) 400, 678, 1389
HgaI GACGC 5 cut(s) 298, 358, 1050, 1230, 1261
HhaI GCGC 3 cut(s) 399, 677, 1388
Hin1I GRCGYC 2 cut(s) 1061, 1241
Hin1II CATG 3 cut(s) 247, 466, 667
Hin6I GCGC 3 cut(s) 397, 675, 1386
HinP1I GCGC 3 cut(s) 397, 675, 1386
HincII GTYRAC 1 cut(s) 274
HindII GTYRAC 1 cut(s) 274
HinfI GANTC 3 cut(s) 512, 589, 1210
HphI GGTGA 3 cut(s) 79, 622, 1024
Hpy166II GTNNAC 6 cut(s) 76, 168, 238, 274, 892, 1111
Hpy188III TCNNGA 7 cut(s) 73, 125, 379, 643, 1136, 1414, 1478
Hpy8I GTNNAC 6 cut(s) 76, 168, 238, 274, 892, 1111
Hpy99I CGWCG 9 cut(s) 275, 374, 873, 923, 1066, 1199, 1246, 1279, 1282
HpyAV CCTTC 5 cut(s) 325, 434, 603, 719, 1327
HpyCH4III ACNGT 3 cut(s) 235, 854, 1218
HpyCH4IV ACGT 4 cut(s) 703, 871, 894, 1274
HpyCH4V TGCA 6 cut(s) 573, 672, 1167, 1258, 1380, 1452
HpyF10VI GCNNNNNNNGC 2 cut(s) 669, 1013
HpyF3I CTNAG 3 cut(s) 249, 350, 363
HpySE526I ACGT 4 cut(s) 703, 871, 894, 1274
Hsp92I GRCGYC 2 cut(s) 1061, 1241
Hsp92II CATG 3 cut(s) 247, 466, 667
HspAI GCGC 3 cut(s) 397, 675, 1386
Kpn2I TCCGGA 1 cut(s) 642
KpnI GGTACC 2 cut(s) 64, 1465
KroI GCCGGC 1 cut(s) 1007
KroNI GCCGGC 1 cut(s) 1009
Ksp22I TGATCA 1 cut(s) 612
Kzo9I GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
LmnI GCTCC 8 cut(s) 209, 487, 633, 645, 914, 1066, 1077, 1228
Lsp1109I GCAGC 6 cut(s) 457, 585, 684, 923, 1081, 1242
LweI GCATC 2 cut(s) 147, 1176
MaeI CTAG 3 cut(s) 98, 1049, 1495
MaeII ACGT 4 cut(s) 703, 871, 894, 1274
MaeIII GTNAC 4 cut(s) 298, 635, 704, 1400
MalI GATC 7 cut(s) 186, 389, 563, 614, 758, 859, 993
MboI GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
MboII GAAGA 9 cut(s) 425, 538, 704, 808, 965, 1069, 1110, 1219, 1275
MfeI CAATTG 1 cut(s) 568
MflI RGATCY 4 cut(s) 184, 387, 857, 991
MhlI GDGCHC 4 cut(s) 492, 1161, 1233, 1440
MlsI TGGCCA 1 cut(s) 1001
MluCI AATT 3 cut(s) 568, 769, 975
MluNI TGGCCA 1 cut(s) 1001
MlyI GAGTC 2 cut(s) 506, 583
MmeI TCCRAC 5 cut(s) 51, 873, 952, 1044, 1050
Mox20I TGGCCA 1 cut(s) 1001
MreI CGCCGGCG 1 cut(s) 1007
MroI TCCGGA 1 cut(s) 642
MroNI GCCGGC 1 cut(s) 1007
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 1 cut(s) 1001
MseI TTAA 2 cut(s) 537, 1374
MslI CAYNNNNRTG 1 cut(s) 326
Msp20I TGGCCA 1 cut(s) 1001
MspA1I CMGCKG 1 cut(s) 936
MspR9I CCNGG 4 cut(s) 115, 146, 1441, 1466
MunI CAATTG 1 cut(s) 568
MvaI CCWGG 1 cut(s) 1441
MvnI CGCG 1 cut(s) 309
MwoI GCNNNNNNNGC 2 cut(s) 669, 1013
NaeI GCCGGC 1 cut(s) 1009
NciI CCSGG 3 cut(s) 115, 146, 1466
NcoI CCATGG 1 cut(s) 462
NdeII GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
NgoMIV GCCGGC 1 cut(s) 1007
NlaIII CATG 3 cut(s) 247, 466, 667
NlaIV GGNNCC 6 cut(s) 62, 389, 832, 916, 1438, 1463
NmuCI GTSAC 1 cut(s) 704
PaeR7I CTCGAG 2 cut(s) 125, 392
PasI CCCWGGG 1 cut(s) 1440
PceI AGGCCT 1 cut(s) 929
PdiI GCCGGC 1 cut(s) 1009
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 1 cut(s) 1210
PkrI GCNGC 9 cut(s) 308, 472, 575, 674, 835, 938, 1071, 1257, 1423
PleI GAGTC 2 cut(s) 506, 583
PmaCI CACGTG 2 cut(s) 704, 895
PmlI CACGTG 2 cut(s) 704, 895
PpsI GAGTC 2 cut(s) 506, 583
Ppu21I YACGTR 2 cut(s) 704, 895
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 1 cut(s) 1439
PspCI CACGTG 2 cut(s) 704, 895
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 1 cut(s) 1439
PspN4I GGNNCC 6 cut(s) 62, 389, 832, 916, 1438, 1463
PspOMI GGGCCC 1 cut(s) 1436
PspXI VCTCGAGB 1 cut(s) 392
PsuI RGATCY 4 cut(s) 184, 387, 857, 991
RsaI GTAC 8 cut(s) 62, 623, 751, 881, 1053, 1295, 1307, 1463
RsaNI GTAC 8 cut(s) 61, 622, 750, 880, 1052, 1294, 1306, 1462
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 1 cut(s) 492
SalI GTCGAC 1 cut(s) 272
SaqAI TTAA 2 cut(s) 537, 1374
SatI GCNGC 9 cut(s) 307, 471, 574, 673, 834, 937, 1070, 1256, 1422
Sau3AI GATC 7 cut(s) 184, 387, 561, 612, 756, 857, 991
ScaI AGTACT 1 cut(s) 1053
SchI GAGTC 2 cut(s) 506, 583
ScrFI CCNGG 4 cut(s) 115, 146, 1441, 1466
SduI GDGCHC 4 cut(s) 492, 1161, 1233, 1440
SfaNI GCATC 2 cut(s) 147, 1176
SfcI CTRYAG 1 cut(s) 1214
Sfr274I CTCGAG 2 cut(s) 125, 392
SgrAI CRCCGGYG 1 cut(s) 1007
SinI GGWCC 5 cut(s) 168, 889, 898, 1043, 1407
SlaI CTCGAG 2 cut(s) 125, 392
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 3 cut(s) 41, 125, 392
SmoI CTYRAG 3 cut(s) 41, 125, 392
Sse9I AATT 3 cut(s) 568, 769, 975
SseBI AGGCCT 1 cut(s) 929
SsiI CCGC 9 cut(s) 307, 340, 485, 504, 737, 834, 934, 1226, 1421
SspMI CTAG 3 cut(s) 98, 1049, 1495
SstI GAGCTC 1 cut(s) 492
StuI AGGCCT 1 cut(s) 929
StyD4I CCNGG 4 cut(s) 113, 144, 1439, 1464
StyI CCWWGG 3 cut(s) 462, 778, 1317
TaaI ACNGT 3 cut(s) 235, 854, 1218
TaiI ACGT 4 cut(s) 706, 874, 897, 1277
TaqII GACCGA 1 cut(s) 1031
TasI AATT 3 cut(s) 568, 769, 975
TatI WGTACW 3 cut(s) 621, 879, 1051
TauI GCSGC 3 cut(s) 309, 836, 1424
TfiI GAWTC 1 cut(s) 1210
Tru1I TTAA 2 cut(s) 537, 1374
Tru9I TTAA 2 cut(s) 537, 1374
TscAI CASTG 1 cut(s) 1238
TseFI GTSAC 1 cut(s) 704
TseI GCWGC 6 cut(s) 470, 573, 672, 936, 1069, 1255
Tsp45I GTSAC 1 cut(s) 704
TspDTI ATGAA 4 cut(s) 214, 232, 710, 1460
TspGWI ACGGA 3 cut(s) 22, 767, 809
TspRI CASTG 1 cut(s) 1238
VpaK11BI GGWCC 5 cut(s) 168, 889, 898, 1043, 1407
XagI CCTNNNNNAGG 1 cut(s) 713
XapI RAATTY 1 cut(s) 975
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XhoI CTCGAG 2 cut(s) 125, 392
XmiI GTMKAC 2 cut(s) 237, 273
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 3 cut(s) 98, 1049, 1495
ZrmI AGTACT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.