Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004369

Physical Location & Seq

Genomic Coordinates Reverse (-)

55185530 .. 55189459

Gene Structure 3930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0381400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGATGAGTTGGTTGGGAGAGCCATTAACCAACTTCTTAAGCTTCTTGAGTGTGTTGCTTCTCTTAGCTCTGATCAAGGCCTTTCACAAACTATGGTGGACTCCGATTCGAATTCAGAACCTGATGGCTCTGCAGGGAATTCAAGGTCCTTCTTACAGACTTATCTATGGGAACACCAAGGAAATCTCCAACATGAAAAAGGAAGCGATGAGCAGGTCCACAAATCTATCACATGATATATTTCCTCGAGTTCAACCTCATATTTACACATGGACCAAGAGCTATGGGAAGACTTTTCTTCAATGGTATGGTCTTCGACCTATTTTGGTGGTTACAGAACCTGAATTGTGCAAAGAGATCCTCAATAACAAAGATGGAGTTTATCCAAAACAGAAGGCTGGTGACTTTATGAAGAAGCTAGTAGGAGATAGCATTGTCATCACAGAAGGTGAAAAGTGGGCAAAGTTGAGAAAGGTGTCCAACCATGCCTTTCATGGAGAGAGCTTAACAAATATGTTCCCAGACATGATAACTAGTGCCATCGCGATGGTAGAAAGGTGGAAAAATCATGAAGGGAAAGAGATTGATGTGTATAAAGAATTTAGATTGTTCACTTCGGAAGTGATATCCAAGACAGCATTTGGCAGCAACTACTTAGAAGGACAGAACATTTTTGAAATGATGATGAAGTTTTACCCTTTATTGTCCAAAAGCTTTCTTAAAGTCAGGTTTCCTGGCATGAGCAAGGTTTTTAGAACCAGTGATGAGATTGAATCAGACAAGCTTGAGAAAGGAATACGGGACTCCATAATGGAGATGGTTAAGAAAAGAGAACAAAAGGCAGTGAATATGAGTGGGGAGGAAGAAAGCTTGGGGAGTGATTTTCTAGGATTGCTTTTGAAGGCTCATCATGGTGCCGATAAGAAGAACCGGATTTCGATGAACGAATTAGTTGAAGAGTGCAGGACATTTTACTTTGCAGGGCAAGAGACCACTAATACTCTACTTGCCTGGACTGTTGTGCTTCTAGGACAACATCAAGATTGGCAAGAGGAAGCGAGAAAAGAAGTCCTACAATTATTTGGGAAACAAAATCCAAATCCTGATGACATTTCAAAACTCAAAACAATGAGCATGATCATCAATGAGACTCTAAGGCTATATCCTCCTGCTAATCCGCTGACAAGGAGAGTTGCAAGGGAAGTTAGACTGGGAAAACTCCTACTTCCTGCAAATGTTGAATTGCTTGTCCCACCTTTAGCACTTCATCATGATCCTCAATTATGGGGACAGGATGCTGCACTTTTTAAACCAGAGCGATTCTCTGAAGGGGTTGCTAAAGCTACCAAGGATAATATGGCCTCATTCATGCCGTTTGGATTGGGACCTAGAATGTGTGTGGGTATCAACTTTGCTGCCATTGAAGCAAAGATTGCTCTGTCAATGATTCTACAACGTTACTCATTTACCCTTTCCCCAGGTTATATCCACTCGCCTTCTCAACTTCTTGCTGTTCGTCCACAACATGGAGTTCGAGGTTTTCTCCCCAGCAGCGTTTTGGTAGCGCCGTCAAAGGCACGCAGCGGTGCCTGGACACCGAGACCAACGTCGAGCAAGAGCGCGGGCGGCAAGGAAGCCAAGGCTGATCATCCAGTGGTGGGTCGTCGTAGTGAGCGGCTATTTGCTTCTGCTGGCGCTGCGACCTCTGATGGCGGCGAAGCGTCTAACAGCGGCGACGTCTTTGATGGCGGCACGTTTCTGATGACGGCTATTTGGTCGGCGTCGGAGATGATGATGGCGCGTTTGGGTGTCCAGATCAGAAAACTGGGTGATATGGCTGGGCTGCCTCTGGGTCTATTGTGGAGTCCATTTGGGCTTGAGTTCTCCAAGGATTTGGGACCCATAAGTTTTGATTGGTCTATCGATCTCTTGTATACCCGGATTGCAGATTTTGATGGTTTCGTCTCCAAATCTCAAGGTCGTGGCAATGGTCTCATTGTTGGTAATTATCTTGAGGAGGCTGGGAATTTACCCTCAGTTACGTTAACTGCTGACGTGGACGTAAGCTTGGGGCTAAATTACACTTGTAACCCCAAGCTTAAAAATCAACTCCATCTTCTTCTTCGATCTCCGGCCACCAAAATCACCATCCCCACCAATGATGATGACCTCGATGAAGATCATGATCCCGTGGGCTTTGATCCTCCTCCACCAGCTGCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010087 GO:0010088 GO:0010089 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

741

Amino Acids

82.68

Weight (kDa)

8.64

Isoelectric Point (pI)

38.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	92 - 494	3.3e-80	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01060 AT2G01060
fragaria_vesca	FvH4_3g00070 FvH4_3g00070 FvH4_3g00070
malus_domestica	MD05G1364400.v1.1 MD10G1342100.v1.1
prunus_persica	Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1 Prupe.4G000700_v2.0.a1
pyrus_communis	pycom10g29150
rosa_chinensis	RchiOBHm_Chr5g0000071 RchiOBHm_Chr5g0000091
rosa_laevigata	RLG00000030841
rosa_multiflora	Rmu_ssc0000243.1_g000024
rosa_roxburghii	Rroxscaffold_1G00076000
rosa_rugosa	Rorug04G0381300 Rorug04G0381300 Rorug04G0381300 Rorug04G0381300 Rorug04G0381400
rosa_samantha	Rh5AG000600 Rh5CG000700 Rh5DG000600
rosa_wichuraiana	Rw5G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1740
Acc36I	ACCTGC	1 cut(s)	204
AccB1I	GGYRCC	2 cut(s)	914, 1586
AccB7I	CCANNNNNTGG	1 cut(s)	1526
AccBSI	CCGCTC	1 cut(s)	1675
AccI	GTMKAC	1 cut(s)	1934
AccII	CGCG	3 cut(s)	545, 1622, 1801
AciI	CCGC	8 cut(s)	1178, 1584, 1622, 1626, 1675, 1713, 1731, 1749
AclI	AACGTT	1 cut(s)	1456
AclWI	GGATC	4 cut(s)	352, 1268, 2180, 2195
AcoI	YGGCCR	1 cut(s)	2133
AcsI	RAATTY	4 cut(s)	111, 138, 599, 2026
AcuI	CTGAAG	1 cut(s)	1347
AcyI	GRCGYC	2 cut(s)	1737, 1781
AfiI	CCNNNNNNNGG	2 cut(s)	1526, 1658
AflII	CTTAAG	1 cut(s)	37
AhlI	ACTAGT	1 cut(s)	533
AjiI	CACGTC	1 cut(s)	2056
AjnI	CCWGG	4 cut(s)	733, 1010, 1477, 1589
Alw26I	GTCTC	5 cut(s)	983, 1142, 1594, 1969, 1997
AlwI	GGATC	4 cut(s)	352, 1268, 2180, 2195
AlwNI	CAGNNNCTG	2 cut(s)	121, 341
Ama87I	CYCGRG	1 cut(s)	246
AoxI	GGCC	3 cut(s)	78, 1359, 2133
ApeKI	GCWGC	8 cut(s)	645, 1298, 1415, 1551, 1581, 1697, 1843, 2216
ApoI	RAATTY	4 cut(s)	111, 138, 599, 2026
AspLEI	GCGC	4 cut(s)	1567, 1622, 1697, 1801
AspS9I	GGNCC	5 cut(s)	146, 216, 273, 1385, 1898
AsuC2I	CCSGG	1 cut(s)	1939
AsuHPI	GGTGA	4 cut(s)	413, 461, 1841, 2137
AsuII	TTCGAA	1 cut(s)	109
AvaI	CYCGRG	1 cut(s)	246
AvaII	GGWCC	5 cut(s)	146, 216, 273, 1385, 1898
BanI	GGYRCC	2 cut(s)	914, 1586
BbsI	GAAGAC	2 cut(s)	296, 305
BbvI	GCAGC	8 cut(s)	657, 1285, 1402, 1563, 1593, 1684, 1830, 2203
BceAI	ACGGC	3 cut(s)	1357, 1552, 1782
BciT130I	CCWGG	4 cut(s)	735, 1012, 1479, 1591
BclI	TGATCA	3 cut(s)	72, 1137, 1645
BcnI	CCSGG	1 cut(s)	1939
BcoDI	GTCTC	5 cut(s)	983, 1142, 1594, 1969, 1997
BcuI	ACTAGT	1 cut(s)	533
BfaI	CTAG	5 cut(s)	419, 534, 887, 1028, 1389
BfmI	CTRYAG	1 cut(s)	131
BfoI	RGCGCY	2 cut(s)	1568, 1698
BfrI	CTTAAG	1 cut(s)	37
BfuAI	ACCTGC	1 cut(s)	204
Bme1390I	CCNGG	5 cut(s)	735, 1012, 1479, 1591, 1939
Bme18I	GGWCC	5 cut(s)	146, 216, 273, 1385, 1898
BmeT110I	CYCGRG	1 cut(s)	246
BmgBI	CACGTC	1 cut(s)	2056
BmgT120I	GGNCC	5 cut(s)	146, 216, 273, 1385, 1898
BmiI	GGNNCC	5 cut(s)	916, 1386, 1588, 1899, 1900
BmrFI	CCNGG	5 cut(s)	735, 1012, 1479, 1591, 1939
BmrI	ACTGGG	2 cut(s)	1220, 1835
BmsI	GCATC	1 cut(s)	1285
BmuI	ACTGGG	2 cut(s)	1220, 1835
BoxI	GACNNNNGTC	1 cut(s)	1606
BpiI	GAAGAC	2 cut(s)	296, 305
BplI	GAGNNNNNCTC	4 cut(s)	1307, 1339, 1527, 1559
Bpu14I	TTCGAA	1 cut(s)	109
BpuEI	CTTGAG	5 cut(s)	67, 806, 1898, 1959, 2033
BpuMI	CCSGG	1 cut(s)	1939
Bsa29I	ATCGAT	1 cut(s)	1923
BsaBI	GATNNNNATC	2 cut(s)	2178, 2184
BsaHI	GRCGYC	2 cut(s)	1737, 1781
BsaI	GGTCTC	3 cut(s)	983, 1594, 1997
BsaJI	CCNNGG	6 cut(s)	177, 1347, 1477, 1638, 1887, 2190
BsaWI	WCCGGW	1 cut(s)	930
Bsc4I	CCNNNNNNNGG	2 cut(s)	1526, 1658
Bse1I	ACTGG	4 cut(s)	759, 1215, 1652, 1830
Bse3DI	GCAATG	1 cut(s)	1993
Bse8I	GATNNNNATC	2 cut(s)	2178, 2184
BseBI	CCWGG	4 cut(s)	735, 1012, 1479, 1591
BseCI	ATCGAT	1 cut(s)	1923
BseDI	CCNNGG	6 cut(s)	177, 1347, 1477, 1638, 1887, 2190
BseGI	GGATG	3 cut(s)	1300, 1648, 2148
BseJI	GATNNNNATC	2 cut(s)	2178, 2184
BseLI	CCNNNNNNNGG	2 cut(s)	1526, 1658
BseMI	GCAATG	1 cut(s)	1993
BseMII	CTCAG	1 cut(s)	2049
BseNI	ACTGG	4 cut(s)	759, 1215, 1652, 1830
BseRI	GAGGAG	2 cut(s)	2030, 2196
BseXI	GCAGC	8 cut(s)	657, 1285, 1402, 1563, 1593, 1684, 1830, 2203
BseYI	CCCAGC	3 cut(s)	1547, 1838, 2021
BsgI	GTGCAG	2 cut(s)	982, 1284
Bsh1236I	CGCG	3 cut(s)	545, 1622, 1801
BshFI	GGCC	3 cut(s)	80, 1361, 2135
BshNI	GGYRCC	2 cut(s)	914, 1586
BshVI	ATCGAT	1 cut(s)	1923
BsiHKCI	CYCGRG	1 cut(s)	246
BsiSI	CCGG	3 cut(s)	931, 1939, 2132
BslFI	GGGAC	5 cut(s)	815, 1235, 1302, 1398, 1911
BslI	CCNNNNNNNGG	2 cut(s)	1526, 1658
BsmAI	GTCTC	5 cut(s)	983, 1142, 1594, 1969, 1997
BsmBI	CGTCTC	1 cut(s)	1969
BsmFI	GGGAC	5 cut(s)	815, 1235, 1302, 1398, 1911
BsnI	GGCC	3 cut(s)	80, 1361, 2135
Bso31I	GGTCTC	3 cut(s)	983, 1594, 1997
BsoBI	CYCGRG	1 cut(s)	246
Bsp119I	TTCGAA	1 cut(s)	109
Bsp68I	TCGCGA	1 cut(s)	545
BspACI	CCGC	8 cut(s)	1178, 1584, 1622, 1626, 1675, 1713, 1731, 1749
BspANI	GGCC	3 cut(s)	80, 1361, 2135
BspCNI	CTCAG	1 cut(s)	2048
BspDI	ATCGAT	1 cut(s)	1923
BspFNI	CGCG	3 cut(s)	545, 1622, 1801
BspHI	TCATGA	3 cut(s)	568, 1270, 2182
BspLI	GGNNCC	5 cut(s)	916, 1386, 1588, 1899, 1900
BspMAI	CTGCAG	1 cut(s)	135
BspMI	ACCTGC	1 cut(s)	204
BspPI	GGATC	4 cut(s)	352, 1268, 2180, 2195
BspT104I	TTCGAA	1 cut(s)	109
BspT107I	GGYRCC	2 cut(s)	914, 1586
BspTI	CTTAAG	1 cut(s)	37
BspTNI	GGTCTC	3 cut(s)	983, 1594, 1997
BsrBI	CCGCTC	1 cut(s)	1675
BsrDI	GCAATG	1 cut(s)	1993
BsrI	ACTGG	4 cut(s)	759, 1215, 1652, 1830
BssECI	CCNNGG	6 cut(s)	177, 1347, 1477, 1638, 1887, 2190
BssNAI	GTATAC	1 cut(s)	1935
BssNI	GRCGYC	2 cut(s)	1737, 1781
BssT1I	CCWWGG	4 cut(s)	177, 1347, 1638, 1887
Bst1107I	GTATAC	1 cut(s)	1935
Bst2UI	CCWGG	4 cut(s)	735, 1012, 1479, 1591
Bst4CI	ACNGT	1 cut(s)	1018
Bst6I	CTCTTC	1 cut(s)	951
BstACI	GRCGYC	2 cut(s)	1737, 1781
BstAFI	CTTAAG	1 cut(s)	37
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstBI	TTCGAA	1 cut(s)	109
BstC8I	GCNNGC	3 cut(s)	1579, 1624, 1693
BstDEI	CTNAG	4 cut(s)	64, 655, 1154, 2035
BstDSI	CCRYGG	1 cut(s)	2190
BstF5I	GGATG	3 cut(s)	1300, 1648, 2148
BstFNI	CGCG	3 cut(s)	545, 1622, 1801
BstH2I	RGCGCY	2 cut(s)	1568, 1698
BstHHI	GCGC	4 cut(s)	1567, 1622, 1697, 1801
BstMAI	GTCTC	5 cut(s)	983, 1142, 1594, 1969, 1997
BstMWI	GCNNNNNNNGC	4 cut(s)	1424, 1433, 1626, 1697
BstNI	CCWGG	4 cut(s)	735, 1012, 1479, 1591
BstPAI	GACNNNNGTC	1 cut(s)	1606
BstSCI	CCNGG	5 cut(s)	733, 1010, 1477, 1589, 1937
BstSFI	CTRYAG	1 cut(s)	131
BstUI	CGCG	3 cut(s)	545, 1622, 1801
BstV1I	GCAGC	8 cut(s)	657, 1285, 1402, 1563, 1593, 1684, 1830, 2203
BstV2I	GAAGAC	2 cut(s)	296, 305
BstX2I	RGATCY	1 cut(s)	357
BstXI	CCANNNNNNTGG	2 cut(s)	547, 1894
BstYI	RGATCY	1 cut(s)	357
BstZ17I	GTATAC	1 cut(s)	1935
Bsu15I	ATCGAT	1 cut(s)	1923
BsuRI	GGCC	3 cut(s)	80, 1361, 2135
BsuTUI	ATCGAT	1 cut(s)	1923
BtgI	CCRYGG	1 cut(s)	2190
BtgZI	GCGATG	3 cut(s)	221, 526, 560
BtrI	CACGTC	1 cut(s)	2056
BtsCI	GGATG	3 cut(s)	1300, 1648, 2148
BtsI	GCAGTG	1 cut(s)	849
BtsIMutI	CAGTG	3 cut(s)	766, 849, 1659
BtuMI	TCGCGA	1 cut(s)	545
BveI	ACCTGC	1 cut(s)	204
Cac8I	GCNNGC	3 cut(s)	1579, 1624, 1693
CaiI	CAGNNNCTG	2 cut(s)	121, 341
CciI	TCATGA	3 cut(s)	568, 1270, 2182
CfoI	GCGC	4 cut(s)	1567, 1622, 1697, 1801
Cfr13I	GGNCC	5 cut(s)	146, 216, 273, 1385, 1898
ClaI	ATCGAT	1 cut(s)	1923
CseI	GACGC	2 cut(s)	1710, 1770
DdeI	CTNAG	4 cut(s)	64, 655, 1154, 2035
DraI	TTTAAA	1 cut(s)	1309
EaeI	YGGCCR	1 cut(s)	2133
Eam1104I	CTCTTC	1 cut(s)	951
EarI	CTCTTC	1 cut(s)	951
Eco130I	CCWWGG	4 cut(s)	177, 1347, 1638, 1887
Eco147I	AGGCCT	1 cut(s)	80
Eco31I	GGTCTC	3 cut(s)	983, 1594, 1997
Eco32I	GATATC	1 cut(s)	627
Eco47I	GGWCC	5 cut(s)	146, 216, 273, 1385, 1898
Eco57I	CTGAAG	1 cut(s)	1347
Eco88I	CYCGRG	1 cut(s)	246
EcoO109I	RGGNCCY	3 cut(s)	146, 1385, 1898
EcoRI	GAATTC	2 cut(s)	111, 138
EcoRII	CCWGG	4 cut(s)	733, 1010, 1477, 1589
EcoRV	GATATC	1 cut(s)	627
EcoT14I	CCWWGG	4 cut(s)	177, 1347, 1638, 1887
ErhI	CCWWGG	4 cut(s)	177, 1347, 1638, 1887
Esp3I	CGTCTC	1 cut(s)	1969
FaqI	GGGAC	5 cut(s)	815, 1235, 1302, 1398, 1911
FauI	CCCGC	1 cut(s)	1615
FbaI	TGATCA	3 cut(s)	72, 1137, 1645
FblI	GTMKAC	1 cut(s)	1934
FokI	GGATG	3 cut(s)	1307, 1635, 2135
FspBI	CTAG	5 cut(s)	419, 534, 887, 1028, 1389
GlaI	GCGC	4 cut(s)	1566, 1621, 1696, 1800
GsaI	CCCAGC	3 cut(s)	1551, 1842, 2025
HaeII	RGCGCY	2 cut(s)	1568, 1698
HaeIII	GGCC	3 cut(s)	80, 1361, 2135
HapII	CCGG	3 cut(s)	931, 1939, 2132
HgaI	GACGC	2 cut(s)	1710, 1770
HhaI	GCGC	4 cut(s)	1567, 1622, 1697, 1801
Hin1I	GRCGYC	2 cut(s)	1737, 1781
Hin6I	GCGC	4 cut(s)	1565, 1620, 1695, 1799
HinP1I	GCGC	4 cut(s)	1565, 1620, 1695, 1799
HincII	GTYRAC	1 cut(s)	2046
HindII	GTYRAC	1 cut(s)	2046
HindIII	AAGCTT	6 cut(s)	40, 712, 782, 868, 2065, 2096
HinfI	GANTC	8 cut(s)	100, 106, 773, 803, 1150, 1320, 1447, 1864
HpaI	GTTAAC	1 cut(s)	2046
HpaII	CCGG	3 cut(s)	931, 1939, 2132
HphI	GGTGA	4 cut(s)	413, 461, 1841, 2137
Hpy166II	GTNNAC	7 cut(s)	99, 219, 612, 1520, 1935, 2046, 2059
Hpy188III	TCNNGA	9 cut(s)	46, 544, 569, 1040, 1103, 1271, 1813, 2012, 2183
Hpy8I	GTNNAC	7 cut(s)	99, 219, 612, 1520, 1935, 2046, 2059
Hpy99I	CGWCG	4 cut(s)	1612, 1668, 1739, 1786
HpyAV	CCTTC	8 cut(s)	159, 388, 440, 566, 653, 895, 1322, 1506
HpyCH4III	ACNGT	1 cut(s)	1018
HpyCH4IV	ACGT	7 cut(s)	1456, 1607, 1737, 1754, 2042, 2055, 2061
HpyCH4V	TGCA	9 cut(s)	133, 351, 963, 980, 1196, 1232, 1301, 1946, 2219
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1424, 1433, 1626, 1697
HpyF3I	CTNAG	4 cut(s)	64, 655, 1154, 2035
HpySE526I	ACGT	7 cut(s)	1456, 1607, 1737, 1754, 2042, 2055, 2061
Hsp92I	GRCGYC	2 cut(s)	1737, 1781
HspAI	GCGC	4 cut(s)	1565, 1620, 1695, 1799
KflI	GGGWCCC	1 cut(s)	1898
Ksp22I	TGATCA	3 cut(s)	72, 1137, 1645
KspAI	GTTAAC	1 cut(s)	2046
Lsp1109I	GCAGC	8 cut(s)	657, 1285, 1402, 1563, 1593, 1684, 1830, 2203
LweI	GCATC	1 cut(s)	1285
MaeI	CTAG	5 cut(s)	419, 534, 887, 1028, 1389
MaeII	ACGT	7 cut(s)	1456, 1607, 1737, 1754, 2042, 2055, 2061
MaeIII	GTNAC	5 cut(s)	331, 401, 1457, 2038, 2087
MbiI	CCGCTC	1 cut(s)	1675
MflI	RGATCY	1 cut(s)	357
MlyI	GAGTC	4 cut(s)	94, 797, 1144, 1873
MmeI	TCCRAC	3 cut(s)	213, 504, 1764
MseI	TTAA	9 cut(s)	26, 38, 506, 720, 822, 1308, 2045, 2100, 2224
MslI	CAYNNNNRTG	2 cut(s)	545, 912
MspA1I	CMGCKG	4 cut(s)	1180, 1584, 1731, 2216
MspCI	CTTAAG	1 cut(s)	37
MspI	CCGG	3 cut(s)	931, 1939, 2132
MspR9I	CCNGG	5 cut(s)	735, 1012, 1479, 1591, 1939
MvaI	CCWGG	4 cut(s)	735, 1012, 1479, 1591
MvnI	CGCG	3 cut(s)	545, 1622, 1801
MwoI	GCNNNNNNNGC	4 cut(s)	1424, 1433, 1626, 1697
NciI	CCSGG	1 cut(s)	1939
NlaIV	GGNNCC	5 cut(s)	916, 1386, 1588, 1899, 1900
NmuCI	GTSAC	1 cut(s)	401
NruI	TCGCGA	1 cut(s)	545
NspV	TTCGAA	1 cut(s)	109
PaeR7I	CTCGAG	1 cut(s)	246
PagI	TCATGA	3 cut(s)	568, 1270, 2182
PceI	AGGCCT	1 cut(s)	80
PfeI	GAWTC	4 cut(s)	106, 773, 1320, 1447
PflMI	CCANNNNNTGG	1 cut(s)	1526
PleI	GAGTC	4 cut(s)	94, 797, 1144, 1872
PpsI	GAGTC	4 cut(s)	94, 797, 1144, 1872
PpuMI	RGGWCCY	3 cut(s)	146, 1385, 1898
PshAI	GACNNNNGTC	1 cut(s)	1606
Psp1406I	AACGTT	1 cut(s)	1456
Psp5II	RGGWCCY	3 cut(s)	146, 1385, 1898
Psp6I	CCWGG	4 cut(s)	733, 1010, 1477, 1589
PspFI	CCCAGC	3 cut(s)	1547, 1838, 2021
PspGI	CCWGG	4 cut(s)	733, 1010, 1477, 1589
PspN4I	GGNNCC	5 cut(s)	916, 1386, 1588, 1899, 1900
PspPI	GGNCC	5 cut(s)	146, 216, 273, 1385, 1898
PspPPI	RGGWCCY	3 cut(s)	146, 1385, 1898
PspXI	VCTCGAGB	1 cut(s)	246
PstI	CTGCAG	1 cut(s)	135
PstNI	CAGNNNCTG	2 cut(s)	121, 341
PsuI	RGATCY	1 cut(s)	357
PvuII	CAGCTG	1 cut(s)	2216
RruI	TCGCGA	1 cut(s)	545
RseI	CAYNNNNRTG	2 cut(s)	545, 912
SaqAI	TTAA	9 cut(s)	26, 38, 506, 720, 822, 1308, 2045, 2100, 2224
Sau96I	GGNCC	5 cut(s)	146, 216, 273, 1385, 1898
SchI	GAGTC	4 cut(s)	94, 797, 1144, 1873
ScrFI	CCNGG	5 cut(s)	735, 1012, 1479, 1591, 1939
SfaNI	GCATC	1 cut(s)	1285
SfcI	CTRYAG	1 cut(s)	131
Sfr274I	CTCGAG	1 cut(s)	246
SfuI	TTCGAA	1 cut(s)	109
SinI	GGWCC	5 cut(s)	146, 216, 273, 1385, 1898
SlaI	CTCGAG	1 cut(s)	246
SmiMI	CAYNNNNRTG	2 cut(s)	545, 912
SmlI	CTYRAG	7 cut(s)	37, 46, 246, 785, 1877, 1974, 2012
SmoI	CTYRAG	7 cut(s)	37, 46, 246, 785, 1877, 1974, 2012
SpeI	ACTAGT	1 cut(s)	533
SseBI	AGGCCT	1 cut(s)	80
SsiI	CCGC	8 cut(s)	1178, 1584, 1622, 1626, 1675, 1713, 1731, 1749
SspMI	CTAG	5 cut(s)	419, 534, 887, 1028, 1389
StuI	AGGCCT	1 cut(s)	80
StyD4I	CCNGG	5 cut(s)	733, 1010, 1477, 1589, 1937
StyI	CCWWGG	4 cut(s)	177, 1347, 1638, 1887
TaaI	ACNGT	1 cut(s)	1018
TaiI	ACGT	7 cut(s)	1459, 1610, 1740, 1757, 2045, 2058, 2064
TaqI	TCGA	9 cut(s)	109, 247, 316, 938, 1534, 1610, 1923, 2125, 2172
TauI	GCSGC	5 cut(s)	1629, 1678, 1716, 1734, 1752
TfiI	GAWTC	4 cut(s)	106, 773, 1320, 1447
Tru1I	TTAA	9 cut(s)	26, 38, 506, 720, 822, 1308, 2045, 2100, 2224
Tru9I	TTAA	9 cut(s)	26, 38, 506, 720, 822, 1308, 2045, 2100, 2224
TscAI	CASTG	3 cut(s)	766, 849, 1659
TseFI	GTSAC	1 cut(s)	401
TseI	GCWGC	8 cut(s)	645, 1298, 1415, 1551, 1581, 1697, 1843, 2216
Tsp45I	GTSAC	1 cut(s)	401
TspDTI	ATGAA	9 cut(s)	209, 425, 482, 585, 701, 956, 1256, 1357, 2190
TspRI	CASTG	3 cut(s)	766, 849, 1659
Van91I	CCANNNNNTGG	1 cut(s)	1526
Vha464I	CTTAAG	1 cut(s)	37
VpaK11BI	GGWCC	5 cut(s)	146, 216, 273, 1385, 1898
XapI	RAATTY	4 cut(s)	111, 138, 599, 2026
XcmI	CCANNNNNNNNNTGG	4 cut(s)	491, 814, 1354, 1555
XhoI	CTCGAG	1 cut(s)	246
XmiI	GTMKAC	1 cut(s)	1934
XspI	CTAG	5 cut(s)	419, 534, 887, 1028, 1389
ZraI	GACGTC	1 cut(s)	1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.