Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015234

Physical Location & Seq

Genomic Coordinates Reverse (-)

59848993 .. 59852677

Gene Structure 3685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0442000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGACTCGAAGACACCGATACATATTTCACATTCGTCGAGTTTAGGAAATTCTTTGGAGTTTGAACAACATCTACCACTTAAGGATAGGCTGAAGTCCTTCAAATCCACTCATTTCGAACCAGATGAATTTGTCACCGCCAAATGCCACGCCATGACTGAGAAGGAAGTAAAGAACCTGTGCTCCTACCTTCTTGAACTAAAGAGGGCATCTGCCGAGGAAATGCGTAAAAGTGTGTATGCTAATTATTCGGCTTTTATCCGTACATCTAAGGAGATCACTGACCTTGAGGGACAGCTCCTTTCCATGAGAAATCTCTTATCTACTCAAGCAGCTTTAGTTCATGGTTTATCTGAAGGAGTTCTAGTTGATTCAATGTCTGCTTCTCAGGATGATTATGACGACGAGGACACATCTGATGAAAACAGACCCCTTTCCGAGACAGAAAAATGGTTTGCAGAATTTTTGGACACTCTGGAAGTCCTATTGGCCGAAAGAAGGGTGAATGAAGCTATGGCTGCCTTGGATGAAGGAGAGCGTACAGTTTATAAAGCTGTTGACAAGCGAACTATAACCCGAGCTGCATTCTTGTCATTCCAGACTACCATCAATGGACAGAGACAAAGATTAGTAGATCAGATTGCAGAGACTATGTTGCAGCCTTCAATTGGTGCTGATGAACTTCGATCAGCTGTTGTAGCTCTCAAAAAGCTCGGGGATGGTTCCCGTGCGCATACGTTGCTGCTCAGGTCTCACTGTCAGAAGTTGCAGTCTAATATGAAAAACCTTAATTCCTCAACCACTTCATATGGAGGAGCATACATCACTACATTATCGCAAATACTGTTTCGTTTCATTGCACAAGCAGCAAGTGACTCCTTGGCGGTTTTCAGTGAGGACCATGCTTATACATCTGAGCTTGTGACATGGGCAGTCAAACAGACCGAGGCTTATGCTCTTCTACTAAAGAGGCATGTTCTAGCATCAGCAGCGGCTGCTGGGAGTCTAAGTGTTGCTGCCGAGTGTGTTCATATATGCTTGGGTCATTGTTCTTTGCTAGAAGCTCGCGGATTGTGCCTCTCTCCTGTTCTGTTGAGACTATTTAGGCCATTTGTCGAACAGGCATTGAGTTGCAACTTAAGGAGAATTGAACAAAGCAGCTGTGCATTAGCTGTTGCGGACGATTGGTTTCTTCTTCATCCAACAATTGGTACACGCCCTTTGGGTTCTGCTTCCTCTCTTCCTAGTTTAAGTGCAAACCAGCCAAAGCTTTCAAGCAGTGCTTACAGATTCAATGCAATGGTTCAGGAACTTCTAGAGGACGTGGCGCCCCTCGAGACTCTTCAGCTAGATGGTCCAGCATTAGAAGGCGTTTTACAAGTGTTCAACTCCTATGTCAATTTGCTGATCCATGCACTACCTGGTGCCGTAGAGAGCGAAGAGGAAGTTCCTATAATTGTTAGCATGGCAGAGACAGAGGCACAACAGATGGCTTTGTTAGCTAATGCATCATTGTTAGCAGACGAGCTGCTCCCACGCGCTGCCATGAAGCTTTTGCCCTTCCAGCAGGGTCAAACTAACAGGTCGATGCCAGAGATGACCCCTAGGAGAAGTTCGGACAAACAAAGCCGCGTTCCAGACCCAGGCAGGGAATGGAAGCGGCGGCTTCAGCGTTCAGTTGAACAGTTGAGAGATAGCTTCTGTAGACTCCATGCTCTTGATCTCATCTTCACAGAAGATGGCGATACGCGTCTCAACGCGCAAATGTACACATGCATGGATGAAAGTGTAGAGCCTGAATGGTTCCCATCTCCAATTCTTCAGGAACTCTTTGCAAAGCTGACAAGGATGGCAAACATTGCAACTGATATGTTTGTGGGAAGGGAAAGGTTTGCAACTATCTTATTAATGAGACTCACGGAGACTGTGATCCTCTGGCTTTCTGAGGATCAAAACTTTTGGGCGGAGATAGAAGAGGGCCCAAGGCCATTAGGCCCTCTTGGACTTCAACAGTTCTATTTGGACATGCAGTTTGTGCTGCTTTTTGCATCACAAGGCAGATACCTATCGCGGCATCTGCATCAAGTTATAAAAAACATTATTGCTCGAGCTATCGAAGCGGTTCATGCTACTGGAATAGACCCTTACAGTGTATTGCCAGAAGATGACTGGTTTGCTGAAGTAGCTCAAATTGCAATTAAAATGTTGATTGGGAAAGCTAGCTTCTCCAATGTAGAAGAAGATGGTCTCAGCCCCACTTATTCAATGTCAGGAAAATCTCCATCTATCCATTCTCATGGCAGTGAGACCAATCTTGCCCACCACTATAGAGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009987 GO:0010033 GO:0014070 GO:0023052 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

779

Amino Acids

86.96

Weight (kDa)

5.34

Isoelectric Point (pI)

52.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	34 - 111	5.6e-12	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	150 - 358	1.8e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28480
fragaria_vesca	FvH4_3g08470
malus_domestica	MD05G1309500.v1.1 MD10G1288100.v1.1
prunus_persica	Prupe.4G053500_v2.0.a1
pyrus_communis	pycom10g24110
rosa_chinensis	RchiOBHm_Chr5g0009361
rosa_laevigata	RLG00000031655
rosa_multiflora	Rmu_sc0002711.1_g000021
rosa_roxburghii	Rroxscaffold_1G00066730 Rroxscaffold_1G00067430
rosa_rugosa	Rorug04G0442000
rosa_samantha	Rh5AG072900 Rh5BG069300 Rh5DG069500
rosa_wichuraiana	Rw5G006810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	549, 2090
Acc16I	TGCGCA	1 cut(s)	732
AccB1I	GGYRCC	2 cut(s)	1327, 1424
AccB7I	CCANNNNNTGG	1 cut(s)	1208
AccI	GTMKAC	1 cut(s)	1705
AccII	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
AclWI	GGATC	3 cut(s)	1402, 1924, 1956
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	3 cut(s)	49, 128, 461
AcuI	CTGAAG	6 cut(s)	113, 375, 1328, 1652, 1805, 2199
AcyI	GRCGYC	1 cut(s)	1328
AfaI	GTAC	4 cut(s)	265, 541, 1213, 1769
AfiI	CCNNNNNNNGG	5 cut(s)	498, 668, 1208, 1643, 1648
AflII	CTTAAG	2 cut(s)	80, 1138
AflIII	ACRYGT	1 cut(s)	1748
AjiI	CACGTC	1 cut(s)	1324
AjnI	CCWGG	2 cut(s)	1420, 1642
AloI	GAACNNNNNNTCC	2 cut(s)	167, 199
Alw21I	GWGCWC	1 cut(s)	185
AlwI	GGATC	3 cut(s)	1402, 1924, 1956
AlwNI	CAGNNNCTG	1 cut(s)	995
Ama87I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
AoxI	GGCC	5 cut(s)	489, 1106, 1978, 1985, 1993
ApaI	GGGCCC	1 cut(s)	1982
ApoI	RAATTY	3 cut(s)	49, 128, 461
ArsI	GACNNNNNNTTYG	2 cut(s)	2015, 2047
AseI	ATTAAT	1 cut(s)	1907
Asp700I	GAANNNNTTC	3 cut(s)	98, 360, 2121
AspA2I	CCTAGG	1 cut(s)	1604
AspLEI	GCGC	4 cut(s)	733, 1330, 1541, 1762
AspS9I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
AsuHPI	GGTGA	2 cut(s)	127, 514
AsuII	TTCGAA	1 cut(s)	117
AsuNHI	GCTAGC	1 cut(s)	2219
AvaI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
AvaII	GGWCC	2 cut(s)	898, 1355
AvrII	CCTAGG	1 cut(s)	1604
BaeGI	GKGCMC	1 cut(s)	1982
BanI	GGYRCC	2 cut(s)	1327, 1424
BanII	GRGCYC	1 cut(s)	1982
BarI	GAAGNNNNNNTAC	2 cut(s)	1359, 1391
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	1 cut(s)	185
BccI	CCATC	9 cut(s)	614, 713, 1346, 1483, 1733, 1816, 1843, 2237, 2290
BceAI	ACGGC	1 cut(s)	1412
BcgI	CGANNNNNNTGC	2 cut(s)	935, 969
BciT130I	CCWGG	2 cut(s)	1422, 1644
BfaI	CTAG	8 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605, 2220
BfmI	CTRYAG	2 cut(s)	1702, 2326
BfoI	RGCGCY	1 cut(s)	1331
BfrI	CTTAAG	2 cut(s)	80, 1138
BlnI	CCTAGG	1 cut(s)	1604
Bme1390I	CCNGG	2 cut(s)	1422, 1644
Bme18I	GGWCC	2 cut(s)	898, 1355
BmeT110I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
BmgBI	CACGTC	1 cut(s)	1324
BmgT120I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
BmiI	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
BmrFI	CCNGG	2 cut(s)	1422, 1644
BmsI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
BmtI	GCTAGC	1 cut(s)	2223
BpiI	GAAGAC	1 cut(s)	17
Bpu10I	CCTNAGC	1 cut(s)	746
Bpu14I	TTCGAA	1 cut(s)	117
BpuEI	CTTGAG	2 cut(s)	308, 312
BsaBI	GATNNNNATC	1 cut(s)	2065
BsaHI	GRCGYC	1 cut(s)	1328
BsaI	GGTCTC	3 cut(s)	756, 2252, 2300
BsaJI	CCNNGG	7 cut(s)	216, 522, 879, 945, 1604, 1642, 1982
BsaXI	ACNNNNNCTCC	6 cut(s)	167, 197, 351, 381, 994, 1024
Bsc4I	CCNNNNNNNGG	5 cut(s)	498, 668, 1208, 1643, 1648
Bse1I	ACTGG	2 cut(s)	2137, 2174
Bse3DI	GCAATG	3 cut(s)	855, 1305, 1857
Bse8I	GATNNNNATC	1 cut(s)	2065
BseBI	CCWGG	2 cut(s)	1422, 1644
BseDI	CCNNGG	7 cut(s)	216, 522, 879, 945, 1604, 1642, 1982
BseGI	GGATG	6 cut(s)	397, 532, 724, 1198, 1786, 1854
BseJI	GATNNNNATC	1 cut(s)	2065
BseLI	CCNNNNNNNGG	5 cut(s)	498, 668, 1208, 1643, 1648
BseMI	GCAATG	3 cut(s)	855, 1305, 1857
BseMII	CTCAG	6 cut(s)	150, 401, 760, 906, 1935, 2263
BseNI	ACTGG	2 cut(s)	2137, 2174
BseRI	GAGGAG	1 cut(s)	828
BseSI	GKGCMC	1 cut(s)	1982
BseYI	CCCAGC	1 cut(s)	998
Bsh1236I	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BshFI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BshNI	GGYRCC	2 cut(s)	1327, 1424
BsiHKAI	GWGCWC	1 cut(s)	185
BsiHKCI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
BslFI	GGGAC	1 cut(s)	306
BslI	CCNNNNNNNGG	5 cut(s)	498, 668, 1208, 1643, 1648
BsmBI	CGTCTC	1 cut(s)	1757
BsmFI	GGGAC	1 cut(s)	306
BsmI	GAATGC	1 cut(s)	584
BsnI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
Bso31I	GGTCTC	3 cut(s)	756, 2252, 2300
BsoBI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
Bsp119I	TTCGAA	1 cut(s)	117
Bsp120I	GGGCCC	1 cut(s)	1978
Bsp1286I	GDGCHC	2 cut(s)	185, 1982
Bsp1407I	TGTACA	1 cut(s)	1767
Bsp143I	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BspANI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BspCNI	CTCAG	6 cut(s)	151, 400, 759, 907, 1936, 2262
BspFNI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BspLI	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
BspOI	GCTAGC	1 cut(s)	2223
BspPI	GGATC	3 cut(s)	1402, 1924, 1956
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	1 cut(s)	117
BspT107I	GGYRCC	2 cut(s)	1327, 1424
BspTI	CTTAAG	2 cut(s)	80, 1138
BspTNI	GGTCTC	3 cut(s)	756, 2252, 2300
BsrDI	GCAATG	3 cut(s)	855, 1305, 1857
BsrGI	TGTACA	1 cut(s)	1767
BsrI	ACTGG	2 cut(s)	2137, 2174
BssECI	CCNNGG	7 cut(s)	216, 522, 879, 945, 1604, 1642, 1982
BssMI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BssNI	GRCGYC	1 cut(s)	1328
BssT1I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Bst2UI	CCWGG	2 cut(s)	1422, 1644
Bst4CI	ACNGT	7 cut(s)	544, 758, 846, 1686, 1927, 2013, 2150
Bst6I	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
BstACI	GRCGYC	1 cut(s)	1328
BstAFI	CTTAAG	2 cut(s)	80, 1138
BstAPI	GCANNNNNTGC	4 cut(s)	739, 995, 1859, 2035
BstAUI	TGTACA	1 cut(s)	1767
BstBI	TTCGAA	1 cut(s)	117
BstC8I	GCNNGC	2 cut(s)	1066, 2221
BstDEI	CTNAG	8 cut(s)	159, 270, 387, 746, 915, 1007, 1944, 2249
BstF5I	GGATG	6 cut(s)	397, 532, 724, 1198, 1786, 1854
BstFNI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BstH2I	RGCGCY	1 cut(s)	1331
BstHHI	GCGC	4 cut(s)	733, 1330, 1541, 1762
BstKTI	GATC	7 cut(s)	279, 637, 689, 1410, 1723, 1932, 1951
BstMBI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BstNI	CCWGG	2 cut(s)	1422, 1644
BstNSI	RCATGY	3 cut(s)	977, 1776, 2029
BstSCI	CCNGG	2 cut(s)	1420, 1642
BstSFI	CTRYAG	2 cut(s)	1702, 2326
BstSLI	GKGCMC	1 cut(s)	1982
BstUI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BstV2I	GAAGAC	1 cut(s)	17
BstXI	CCANNNNNNTGG	1 cut(s)	2297
BsuRI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BtrI	CACGTC	1 cut(s)	1324
BtsCI	GGATG	6 cut(s)	397, 532, 724, 1198, 1786, 1854
BtsI	GCAGTG	2 cut(s)	1285, 2308
BtsIMutI	CAGTG	6 cut(s)	279, 754, 898, 1285, 2155, 2308
Cac8I	GCNNGC	2 cut(s)	1066, 2221
CaiI	CAGNNNCTG	1 cut(s)	995
CfoI	GCGC	4 cut(s)	733, 1330, 1541, 1762
Cfr13I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
CseI	GACGC	1 cut(s)	1739
CsiI	ACCWGGT	1 cut(s)	1420
Csp6I	GTAC	4 cut(s)	264, 540, 1212, 1768
CviQI	GTAC	4 cut(s)	264, 540, 1212, 1768
DdeI	CTNAG	8 cut(s)	159, 270, 387, 746, 915, 1007, 1944, 2249
DinI	GGCGCC	1 cut(s)	1329
DpnI	GATC	7 cut(s)	278, 636, 688, 1409, 1722, 1931, 1950
DpnII	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
EarI	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
EciI	GGCGGA	1 cut(s)	1979
Eco130I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Eco24I	GRGCYC	1 cut(s)	1982
Eco31I	GGTCTC	3 cut(s)	756, 2252, 2300
Eco47I	GGWCC	2 cut(s)	898, 1355
Eco57I	CTGAAG	6 cut(s)	113, 375, 1328, 1652, 1805, 2199
Eco88I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
EcoO109I	RGGNCCY	2 cut(s)	1978, 1994
EcoRII	CCWGG	2 cut(s)	1420, 1642
EcoT14I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
EcoT22I	ATGCAT	2 cut(s)	1510, 1778
EcoT38I	GRGCYC	1 cut(s)	1982
EgeI	GGCGCC	1 cut(s)	1329
EheI	GGCGCC	1 cut(s)	1329
ErhI	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Esp3I	CGTCTC	1 cut(s)	1757
FalI	AAGNNNNNCTT	2 cut(s)	1267, 1299
FaqI	GGGAC	1 cut(s)	306
FauNDI	CATATG	1 cut(s)	808
FblI	GTMKAC	1 cut(s)	1705
FokI	GGATG	6 cut(s)	404, 539, 731, 1185, 1793, 1861
FriOI	GRGCYC	1 cut(s)	1982
FspAI	RTGCGCAY	1 cut(s)	732
FspBI	CTAG	8 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605, 2220
FspI	TGCGCA	1 cut(s)	732
GlaI	GCGC	4 cut(s)	732, 1329, 1540, 1761
GsaI	CCCAGC	1 cut(s)	1002
HaeII	RGCGCY	1 cut(s)	1331
HaeIII	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
HgaI	GACGC	1 cut(s)	1739
HhaI	GCGC	4 cut(s)	733, 1330, 1541, 1762
Hin1I	GRCGYC	1 cut(s)	1328
Hin6I	GCGC	4 cut(s)	731, 1328, 1539, 1760
HinP1I	GCGC	4 cut(s)	731, 1328, 1539, 1760
HincII	GTYRAC	1 cut(s)	559
HindII	GTYRAC	1 cut(s)	559
HindIII	AAGCTT	2 cut(s)	1268, 1550
HinfI	GANTC	8 cut(s)	5, 371, 875, 1003, 1290, 1339, 1707, 1914
HphI	GGTGA	2 cut(s)	127, 514
Hpy166II	GTNNAC	4 cut(s)	559, 1214, 1706, 1770
Hpy188I	TCNGA	8 cut(s)	355, 418, 439, 639, 762, 916, 1618, 1945
Hpy8I	GTNNAC	4 cut(s)	559, 1214, 1706, 1770
Hpy99I	CGWCG	2 cut(s)	40, 407
HpyCH4III	ACNGT	7 cut(s)	544, 758, 846, 1686, 1927, 2013, 2150
HpyCH4IV	ACGT	2 cut(s)	737, 1323
HpyF3I	CTNAG	8 cut(s)	159, 270, 387, 746, 915, 1007, 1944, 2249
HpySE526I	ACGT	2 cut(s)	737, 1323
Hsp92I	GRCGYC	1 cut(s)	1328
HspAI	GCGC	4 cut(s)	731, 1328, 1539, 1760
KasI	GGCGCC	1 cut(s)	1327
Kzo9I	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	4 cut(s)	188, 303, 815, 1536
LweI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
MabI	ACCWGGT	1 cut(s)	1420
MaeI	CTAG	8 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605, 2220
MaeII	ACGT	2 cut(s)	737, 1323
MaeIII	GTNAC	3 cut(s)	133, 872, 922
MalI	GATC	7 cut(s)	278, 636, 688, 1409, 1722, 1931, 1950
MboI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
MfeI	CAATTG	2 cut(s)	666, 1206
MhlI	GDGCHC	2 cut(s)	185, 1982
MluI	ACGCGT	1 cut(s)	1748
Mly113I	GGCGCC	1 cut(s)	1328
MlyI	GAGTC	5 cut(s)	869, 1012, 1333, 1701, 1908
MmeI	TCCRAC	1 cut(s)	1226
Mph1103I	ATGCAT	2 cut(s)	1510, 1778
MroXI	GAANNNNTTC	3 cut(s)	98, 360, 2121
MseI	TTAA	6 cut(s)	81, 789, 1139, 1250, 1907, 2199
MslI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
MspA1I	CMGCKG	3 cut(s)	692, 992, 1161
MspCI	CTTAAG	2 cut(s)	80, 1138
MspR9I	CCNGG	2 cut(s)	1422, 1644
MunI	CAATTG	2 cut(s)	666, 1206
Mva1269I	GAATGC	1 cut(s)	584
MvaI	CCWGG	2 cut(s)	1422, 1644
MvnI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
NarI	GGCGCC	1 cut(s)	1328
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
NheI	GCTAGC	1 cut(s)	2219
NlaIV	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
NmeAIII	GCCGAG	2 cut(s)	241, 1045
NmuCI	GTSAC	3 cut(s)	133, 872, 922
NsbI	TGCGCA	1 cut(s)	732
NsiI	ATGCAT	2 cut(s)	1510, 1778
NspI	RCATGY	3 cut(s)	977, 1776, 2029
NspV	TTCGAA	1 cut(s)	117
PaeR7I	CTCGAG	2 cut(s)	1334, 2106
PciSI	GCTCTTC	1 cut(s)	963
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PctI	GAATGC	1 cut(s)	584
PdmI	GAANNNNTTC	3 cut(s)	98, 360, 2121
PfeI	GAWTC	2 cut(s)	371, 1290
PflMI	CCANNNNNTGG	1 cut(s)	1208
PleI	GAGTC	5 cut(s)	869, 1011, 1333, 1701, 1908
PluTI	GGCGCC	1 cut(s)	1331
PpsI	GAGTC	5 cut(s)	869, 1011, 1333, 1701, 1908
PshBI	ATTAAT	1 cut(s)	1907
PsiI	TTATAA	2 cut(s)	549, 2090
Psp6I	CCWGG	2 cut(s)	1420, 1642
PspFI	CCCAGC	1 cut(s)	998
PspGI	CCWGG	2 cut(s)	1420, 1642
PspN4I	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
PspOMI	GGGCCC	1 cut(s)	1978
PspPI	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
PspXI	VCTCGAGB	1 cut(s)	2106
PsrI	GAACNNNNNNTAC	2 cut(s)	57, 89
PstNI	CAGNNNCTG	1 cut(s)	995
PvuII	CAGCTG	2 cut(s)	692, 1161
RsaI	GTAC	4 cut(s)	265, 541, 1213, 1769
RsaNI	GTAC	4 cut(s)	264, 540, 1212, 1768
RseI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	6 cut(s)	81, 789, 1139, 1250, 1907, 2199
Sau3AI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
Sau96I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
SchI	GAGTC	5 cut(s)	869, 1012, 1333, 1701, 1908
ScrFI	CCNGG	2 cut(s)	1422, 1644
SduI	GDGCHC	2 cut(s)	185, 1982
SexAI	ACCWGGT	1 cut(s)	1420
SfaNI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
SfcI	CTRYAG	2 cut(s)	1702, 2326
SfoI	GGCGCC	1 cut(s)	1329
Sfr274I	CTCGAG	2 cut(s)	1334, 2106
SfuI	TTCGAA	1 cut(s)	117
SinI	GGWCC	2 cut(s)	898, 1355
SlaI	CTCGAG	2 cut(s)	1334, 2106
SmiMI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
SmlI	CTYRAG	6 cut(s)	80, 287, 327, 1138, 1334, 2106
SmoI	CTYRAG	6 cut(s)	80, 287, 327, 1138, 1334, 2106
SspDI	GGCGCC	1 cut(s)	1327
SspMI	CTAG	8 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605, 2220
StyD4I	CCNGG	2 cut(s)	1420, 1642
StyI	CCWWGG	4 cut(s)	522, 879, 1604, 1982
TaaI	ACNGT	7 cut(s)	544, 758, 846, 1686, 1927, 2013, 2150
TaiI	ACGT	2 cut(s)	740, 1326
TaqI	TCGA	9 cut(s)	8, 38, 117, 685, 1116, 1335, 1586, 2107, 2115
TaqII	GACCGA	1 cut(s)	959
TatI	WGTACW	1 cut(s)	1767
TauI	GCSGC	5 cut(s)	995, 1632, 1663, 1666, 2074
TfiI	GAWTC	2 cut(s)	371, 1290
Tru1I	TTAA	6 cut(s)	81, 789, 1139, 1250, 1907, 2199
Tru9I	TTAA	6 cut(s)	81, 789, 1139, 1250, 1907, 2199
TscAI	CASTG	6 cut(s)	286, 761, 898, 1285, 2155, 2308
TseFI	GTSAC	3 cut(s)	133, 872, 922
Tsp45I	GTSAC	3 cut(s)	133, 872, 922
TspGWI	ACGGA	2 cut(s)	251, 1934
TspRI	CASTG	6 cut(s)	286, 761, 898, 1285, 2155, 2308
Van91I	CCANNNNNTGG	1 cut(s)	1208
Vha464I	CTTAAG	2 cut(s)	80, 1138
VpaK11BI	GGWCC	2 cut(s)	898, 1355
VspI	ATTAAT	1 cut(s)	1907
XapI	RAATTY	3 cut(s)	49, 128, 461
XbaI	TCTAGA	1 cut(s)	1315
XceI	RCATGY	3 cut(s)	977, 1776, 2029
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1418, 1650, 2166
XhoI	CTCGAG	2 cut(s)	1334, 2106
XmaJI	CCTAGG	1 cut(s)	1604
XmiI	GTMKAC	1 cut(s)	1705
XmnI	GAANNNNTTC	3 cut(s)	98, 360, 2121
XspI	CTAG	8 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605, 2220
Zsp2I	ATGCAT	2 cut(s)	1510, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.