Rorug04G0451000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0009665
Physical Location & Seq
Forward (+)
60598228 .. 60604530
6303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0451000.1

Sequence Viewer

Length: 2022 bp
ATGGAGCAGCAATACTACTACTCAAGGTACTCATTGTTCTTCTTGTTCTTATTCTTCTCTGTGATTTTACTTCTCCCCTTGGTTCAAGCCGGCGACGCCGAAGCTCTGTTAAGCCTGAAATCGACACTGGATCCGACGAACTCGCTGCCGTGGCGGCAAGGAAGCAATGTGTGTGAGTGGGAAGGTGTTAAAGACTGTATGAAAGGAAGAGTCACGAAGTTGGTGTTGGAGTACTTAAATTTGACCGGCACTCTCGACCAGAAAATCCTGAACCAGCTGGATCAGCTCCGAGTTCTGAGCTTCAAGGGCAACTCAATTTCCGGCCAAATCCCCGACCTCTCCGGCCTCGTCAATCTCAAGTCCCTCTTCTTGAACGACAACAATTTCTCCGGCGTTTTCCCCGCGTCCGTTTCGTCCCTCCACCGCTTGAAAGTCCTCGTCCTCGCCGGCAACCACATCTCCGGCGACATTCCGGCGTCGCTGCTCAATCTCCGCCGCCTCTACGTTCTGTATTTGCAAGACAATCAGTTCAGCGGCACCATTCCGCCGCTCAATCAAACCTCCCTCCGGTTTTTCAATGTCTCTAACAACCAACTCTCCGGCGAAATCCCGATCACGGCGGCGCTCATTCAGTTCAACGCCTCGTCGTTTTTCGGAAACATCAATGTCTGCGGTCTGCAGATTCACAACAAATGCCAGAACGGCATTGCTTTCCCGCCGCTACTCGGGCCAAGCTCTTATGATGGTAAACCTACAAAGTCGAAATCCAATCGTTCCAAGCTCATAAAAATCATAGCAGCAAGTGTAGGAGGTTTTGTGGTGCTTGTCATAAGTTTGCTTCTATTGTTCCTATTGTGCCGGAAACACAGCCGTCGCAAAGATGCCGAGATCAGAAACAAAGGGGCTGTTCACGGCGTTGAGGGGACGGAGACCGGAGGAGGAGGTGGAGGTGGGGAGGGTCCTTCAGGCGGTGGCAGGGGAGGTAATAACGGTGGAAAGCAAGGGGCGTTTTCGTGGGAGGGTGATGGACTGGGGAGCCTGGTGTTCTGCGGTCCAGGGGATGAGCAAATGAGTTACAGTCTGGAGGATTTACTGAAGGCTTCGGCTGAGACACTGGGGAGGGGTAGTATGGGAAGTACGTATAAAGCTGTGATGGAGTCTGGGTTTATTGTGACAGTGAAGAGGCTCAAGGATGCAAGGTACCCTAGGCTTGATGAGTTTAGGAGACACATGGACTTGCTTGGGAAGCTGAGGCACCCTCACTTGGTGCCTCTCAGGGCGTATTTTCAGGCTAAGGAGGAAAGGTTGCTCGTATACGATTACTTCCCTAATGGCAGCCTCTTCTCGCTCATTCATGGTTCAAGAACTTCAGGAGGCGGGAAGCCTCTGCACTGGACATCATGTCTTAAAATAGCCGAGGACTTGGCAAGTGGTGTGCTTTATATCCACCAGAATCCTGGCTTAACCCATGGAAACTTGAAATCCTCAAATGTCTTGTTGGGTTCCGATTTTGAATCATGCTTGACAGATTATGGTCTCACTTTATTCCGAGATCCTGATTCACATGAAGAACCTAGTGCAACTACTCTCTTCTATCGTGCCCCTGAATGCCGCGACATCAGAAAACCATCCACACAACAAGCAGATGTATACAGCTTCGGCGTCCTCCTCTTGGAGCTCCTAACCGGAAAGACTCCCTTCCAAGACCTCGTTCAGGAACATGGCTCGGACATTCCAAGCTGGGTCCGTTCAGTTCGCGAGGAAGAGACAGAGTCGGGAGATGAACCTGTCAGCTCGGGCAATGAGGCATCAGAGGAGAAACTTCAGGCGCTTCTTAATATCGCAATGGCTTGTGTTTCGATTACACCAGAGAACAGACCTACAATGAGAGAGGTTCTGCGGATGATAAGGGATTCAAGGGCAGAGGCTGTAGTGTCTTCGAATAACAGCAGTGATCATTCACCGGGGAGATGGTCGGATACTGTTCAGAGCTTGCCTAGGGAAGGACACCTGAGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

673

Amino Acids

73.74

Weight (kDa)

6.97

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 63 8.8e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 90 - 175 1.8e-06 Leucine-rich repeat region
LRR_8 PF13855 118 - 177 1.2e-08 Leucine rich repeat
Pkinase PF00069 369 - 634 2.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 370 - 635 7.2e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1200
AccB1I GGYRCC 4 cut(s) 536, 1200, 1254, 1267
AccBSI CCGCTC 1 cut(s) 550
AccI GTMKAC 2 cut(s) 1314, 1650
AccII CGCG 3 cut(s) 404, 1614, 1758
AclWI GGATC 4 cut(s) 125, 138, 288, 1547
AcoI YGGCCR 1 cut(s) 322
AcsI RAATTY 1 cut(s) 238
AcuI CTGAAG 4 cut(s) 948, 1115, 1353, 1808
AcyI GRCGYC 3 cut(s) 96, 476, 1662
AdeI CACNNNGTG 1 cut(s) 1267
AfaI GTAC 4 cut(s) 29, 233, 1138, 1202
AfiI CCNNNNNNNGG 8 cut(s) 567, 616, 725, 968, 1264, 1672, 1714, 2003
AhdI GACNNNNNGTC 1 cut(s) 1401
AjnI CCWGG 3 cut(s) 1038, 1054, 1456
AjuI GAANNNNNNNTTGG 4 cut(s) 209, 241, 1695, 1727
Alw21I GWGCWC 1 cut(s) 1680
Alw26I GTCTC 6 cut(s) 586, 923, 1103, 1219, 1541, 1760
AlwI GGATC 4 cut(s) 125, 138, 288, 1547
AlwNI CAGNNNCTG 1 cut(s) 1928
Ama87I CYCGRG 2 cut(s) 725, 1795
AoxI GGCC 3 cut(s) 322, 343, 728
ApeKI GCWGC 5 cut(s) 7, 145, 481, 797, 1335
ApoI RAATTY 1 cut(s) 238
Asp718I GGTACC 1 cut(s) 1200
AspA2I CCTAGG 2 cut(s) 1205, 1997
AspLEI GCGC 2 cut(s) 625, 1831
AspS9I GGNCC 4 cut(s) 728, 959, 1052, 1744
AsuC2I CCSGG 1 cut(s) 1965
AsuHPI GGTGA 2 cut(s) 1034, 1953
AsuII TTCGAA 1 cut(s) 1940
AvaI CYCGRG 2 cut(s) 725, 1795
AvaII GGWCC 3 cut(s) 959, 1052, 1744
AvrII CCTAGG 2 cut(s) 1205, 1997
BaeGI GKGCMC 1 cut(s) 1603
BamHI GGATCC 1 cut(s) 130
BanI GGYRCC 4 cut(s) 536, 1200, 1254, 1267
BanII GRGCYC 1 cut(s) 1680
BbsI GAAGAC 1 cut(s) 1929
Bbv12I GWGCWC 1 cut(s) 1680
BbvCI CCTCAGC 1 cut(s) 1250
BbvI GCAGC 5 cut(s) 19, 132, 468, 809, 1347
BccI CCATC 5 cut(s) 737, 1019, 1147, 1636, 1965
BceAI ACGGC 5 cut(s) 133, 633, 718, 855, 928
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 3 cut(s) 1040, 1056, 1458
BciVI GTATCC 1 cut(s) 1972
BclI TGATCA 1 cut(s) 1954
BcnI CCSGG 1 cut(s) 1965
BcoDI GTCTC 6 cut(s) 586, 923, 1103, 1219, 1541, 1760
BfaI CTAG 3 cut(s) 1206, 1575, 1998
BfmI CTRYAG 2 cut(s) 677, 1929
BfoI RGCGCY 2 cut(s) 626, 1832
BfuI GTATCC 1 cut(s) 1972
BglI GCCNNNNNGGC 2 cut(s) 154, 702
BlnI CCTAGG 2 cut(s) 1205, 1997
BmcAI AGTACT 1 cut(s) 233
Bme1390I CCNGG 4 cut(s) 1040, 1056, 1458, 1965
Bme18I GGWCC 3 cut(s) 959, 1052, 1744
BmeRI GACNNNNNGTC 1 cut(s) 1401
BmeT110I CYCGRG 2 cut(s) 725, 1795
BmgT120I GGNCC 4 cut(s) 728, 959, 1052, 1744
BmiI GGNNCC 9 cut(s) 132, 538, 960, 1037, 1202, 1256, 1269, 1504, 1745
BmrFI CCNGG 4 cut(s) 1040, 1056, 1458, 1965
BmrI ACTGGG 2 cut(s) 1040, 1124
BmsI GCATC 3 cut(s) 871, 1183, 1817
BmuI ACTGGG 2 cut(s) 1040, 1124
BpiI GAAGAC 1 cut(s) 1929
BplI GAGNNNNNCTC 2 cut(s) 1243, 1275
BpmI CTGGAG 1 cut(s) 1103
Bpu10I CCTNAGC 3 cut(s) 1250, 1293, 2012
Bpu14I TTCGAA 1 cut(s) 1940
BpuEI CTTGAG 3 cut(s) 7, 341, 1172
BpuMI CCSGG 1 cut(s) 1965
BsaAI YACGTR 1 cut(s) 1140
BsaHI GRCGYC 3 cut(s) 96, 476, 1662
BsaI GGTCTC 2 cut(s) 923, 1541
BsaJI CCNNGG 8 cut(s) 78, 149, 1055, 1205, 1416, 1468, 1964, 1997
BsaWI WCCGGW 3 cut(s) 567, 932, 1685
Bsc4I CCNNNNNNNGG 8 cut(s) 567, 616, 725, 968, 1264, 1672, 1714, 2003
Bse118I RCCGGY 3 cut(s) 89, 245, 446
Bse1I ACTGG 4 cut(s) 132, 1035, 1119, 1397
Bse3DI GCAATG 4 cut(s) 172, 705, 1807, 1851
BseBI CCWGG 3 cut(s) 1040, 1056, 1458
BseDI CCNNGG 8 cut(s) 78, 149, 1055, 1205, 1416, 1468, 1964, 1997
BseGI GGATG 4 cut(s) 1066, 1198, 1628, 1908
BseLI CCNNNNNNNGG 8 cut(s) 567, 616, 725, 968, 1264, 1672, 1714, 2003
BseMI GCAATG 4 cut(s) 172, 705, 1807, 1851
BseMII CTCAG 5 cut(s) 287, 1098, 1241, 1288, 2003
BseNI ACTGG 4 cut(s) 132, 1035, 1119, 1397
BseRI GAGGAG 4 cut(s) 951, 954, 1658, 1829
BseSI GKGCMC 1 cut(s) 1603
BseXI GCAGC 5 cut(s) 19, 132, 468, 809, 1347
BseYI CCCAGC 1 cut(s) 1740
BsgI GTGCAG 1 cut(s) 1373
Bsh1236I CGCG 3 cut(s) 404, 1614, 1758
BshFI GGCC 3 cut(s) 324, 345, 730
BshNI GGYRCC 4 cut(s) 536, 1200, 1254, 1267
BsiHKAI GWGCWC 1 cut(s) 1680
BsiHKCI CYCGRG 2 cut(s) 725, 1795
BslFI GGGAC 3 cut(s) 346, 400, 937
BslI CCNNNNNNNGG 8 cut(s) 567, 616, 725, 968, 1264, 1672, 1714, 2003
BsmAI GTCTC 6 cut(s) 586, 923, 1103, 1219, 1541, 1760
BsmFI GGGAC 3 cut(s) 346, 400, 937
BsmI GAATGC 1 cut(s) 1613
BsnI GGCC 3 cut(s) 324, 345, 730
Bso31I GGTCTC 2 cut(s) 923, 1541
BsoBI CYCGRG 2 cut(s) 725, 1795
Bsp119I TTCGAA 1 cut(s) 1940
Bsp1286I GDGCHC 2 cut(s) 1603, 1680
Bsp143I GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
Bsp19I CCATGG 1 cut(s) 1468
Bsp68I TCGCGA 1 cut(s) 1758
BspANI GGCC 3 cut(s) 324, 345, 730
BspCNI CTCAG 5 cut(s) 288, 1099, 1242, 1287, 2004
BspFNI CGCG 3 cut(s) 404, 1614, 1758
BspLI GGNNCC 9 cut(s) 132, 538, 960, 1037, 1202, 1256, 1269, 1504, 1745
BspMAI CTGCAG 1 cut(s) 681
BspPI GGATC 4 cut(s) 125, 138, 288, 1547
BspT104I TTCGAA 1 cut(s) 1940
BspT107I GGYRCC 4 cut(s) 536, 1200, 1254, 1267
BspTNI GGTCTC 2 cut(s) 923, 1541
BsrBI CCGCTC 1 cut(s) 550
BsrDI GCAATG 4 cut(s) 172, 705, 1807, 1851
BsrFI RCCGGY 3 cut(s) 89, 245, 446
BsrI ACTGG 4 cut(s) 132, 1035, 1119, 1397
BssAI RCCGGY 3 cut(s) 89, 245, 446
BssECI CCNNGG 8 cut(s) 78, 149, 1055, 1205, 1416, 1468, 1964, 1997
BssMI GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
BssNAI GTATAC 2 cut(s) 1315, 1651
BssNI GRCGYC 3 cut(s) 96, 476, 1662
BssT1I CCWWGG 4 cut(s) 78, 1205, 1468, 1997
Bst1107I GTATAC 2 cut(s) 1315, 1651
Bst2UI CCWGG 3 cut(s) 1040, 1056, 1458
Bst4CI ACNGT 5 cut(s) 197, 992, 1079, 1177, 1984
Bst6I CTCTTC 6 cut(s) 202, 371, 1175, 1346, 1595, 1758
BstACI GRCGYC 3 cut(s) 96, 476, 1662
BstBAI YACGTR 1 cut(s) 1140
BstBI TTCGAA 1 cut(s) 1940
BstC8I GCNNGC 3 cut(s) 91, 448, 1994
BstDEI CTNAG 6 cut(s) 296, 1107, 1250, 1274, 1293, 2012
BstDSI CCRYGG 2 cut(s) 149, 1468
BstENI CCTNNNNNAGG 2 cut(s) 1712, 2001
BstF5I GGATG 4 cut(s) 1066, 1198, 1628, 1908
BstFNI CGCG 3 cut(s) 404, 1614, 1758
BstH2I RGCGCY 2 cut(s) 626, 1832
BstHHI GCGC 2 cut(s) 625, 1831
BstKTI GATC 6 cut(s) 133, 283, 615, 891, 1555, 1957
BstMAI GTCTC 6 cut(s) 586, 923, 1103, 1219, 1541, 1760
BstMBI GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
BstMWI GCNNNNNNNGC 8 cut(s) 95, 151, 154, 283, 306, 702, 727, 1246
BstNI CCWGG 3 cut(s) 1040, 1056, 1458
BstSCI CCNGG 4 cut(s) 1038, 1054, 1456, 1963
BstSFI CTRYAG 2 cut(s) 677, 1929
BstSLI GKGCMC 1 cut(s) 1603
BstSNI TACGTA 1 cut(s) 1140
BstUI CGCG 3 cut(s) 404, 1614, 1758
BstV1I GCAGC 5 cut(s) 19, 132, 468, 809, 1347
BstV2I GAAGAC 1 cut(s) 1929
BstX2I RGATCY 2 cut(s) 130, 1552
BstXI CCANNNNNNTGG 1 cut(s) 1457
BstYI RGATCY 2 cut(s) 130, 1552
BstZ17I GTATAC 2 cut(s) 1315, 1651
BsuI GTATCC 1 cut(s) 1972
BsuRI GGCC 3 cut(s) 324, 345, 730
BtgI CCRYGG 2 cut(s) 149, 1468
BtsCI GGATG 4 cut(s) 1066, 1198, 1628, 1908
BtsI GCAGTG 1 cut(s) 1957
BtsIMutI CAGTG 5 cut(s) 125, 1112, 1182, 1390, 1957
BtuMI TCGCGA 1 cut(s) 1758
Cac8I GCNNGC 3 cut(s) 91, 448, 1994
CaiI CAGNNNCTG 1 cut(s) 1928
CfoI GCGC 2 cut(s) 625, 1831
Cfr10I RCCGGY 3 cut(s) 89, 245, 446
Cfr13I GGNCC 4 cut(s) 728, 959, 1052, 1744
CseI GACGC 4 cut(s) 104, 393, 465, 1651
Csp6I GTAC 4 cut(s) 28, 232, 1137, 1201
CviAII CATG 7 cut(s) 1231, 1355, 1401, 1469, 1518, 1565, 1721
CviQI GTAC 4 cut(s) 28, 232, 1137, 1201
DdeI CTNAG 6 cut(s) 296, 1107, 1250, 1274, 1293, 2012
DpnI GATC 6 cut(s) 132, 282, 614, 890, 1554, 1956
DpnII GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
DraIII CACNNNGTG 1 cut(s) 1267
DriI GACNNNNNGTC 1 cut(s) 1401
EaeI YGGCCR 1 cut(s) 322
Eam1104I CTCTTC 6 cut(s) 202, 371, 1175, 1346, 1595, 1758
Eam1105I GACNNNNNGTC 1 cut(s) 1401
EarI CTCTTC 6 cut(s) 202, 371, 1175, 1346, 1595, 1758
EciI GGCGGA 2 cut(s) 482, 534
Ecl136II GAGCTC 1 cut(s) 1678
Eco105I TACGTA 1 cut(s) 1140
Eco130I CCWWGG 4 cut(s) 78, 1205, 1468, 1997
Eco24I GRGCYC 1 cut(s) 1680
Eco31I GGTCTC 2 cut(s) 923, 1541
Eco47I GGWCC 3 cut(s) 959, 1052, 1744
Eco53kI GAGCTC 1 cut(s) 1678
Eco57I CTGAAG 4 cut(s) 948, 1115, 1353, 1808
Eco88I CYCGRG 2 cut(s) 725, 1795
EcoICRI GAGCTC 1 cut(s) 1678
EcoNI CCTNNNNNAGG 2 cut(s) 1712, 2001
EcoO109I RGGNCCY 1 cut(s) 959
EcoRII CCWGG 3 cut(s) 1038, 1054, 1456
EcoT14I CCWWGG 4 cut(s) 78, 1205, 1468, 1997
EcoT38I GRGCYC 1 cut(s) 1680
ErhI CCWWGG 4 cut(s) 78, 1205, 1468, 1997
FaeI CATG 7 cut(s) 1234, 1358, 1404, 1472, 1521, 1568, 1724
FalI AAGNNNNNCTT 4 cut(s) 350, 382, 1682, 1714
FaqI GGGAC 3 cut(s) 346, 400, 937
FatI CATG 7 cut(s) 1230, 1354, 1400, 1468, 1517, 1564, 1720
FauI CCCGC 3 cut(s) 409, 723, 1370
FbaI TGATCA 1 cut(s) 1954
FblI GTMKAC 2 cut(s) 1314, 1650
FokI GGATG 4 cut(s) 1073, 1205, 1615, 1915
FriOI GRGCYC 1 cut(s) 1680
FspBI CTAG 3 cut(s) 1206, 1575, 1998
GlaI GCGC 2 cut(s) 624, 1830
GsaI CCCAGC 1 cut(s) 1744
GsuI CTGGAG 1 cut(s) 1103
HaeII RGCGCY 2 cut(s) 626, 1832
HaeIII GGCC 3 cut(s) 324, 345, 730
HgaI GACGC 4 cut(s) 104, 393, 465, 1651
HhaI GCGC 2 cut(s) 625, 1831
Hin1I GRCGYC 3 cut(s) 96, 476, 1662
Hin1II CATG 7 cut(s) 1234, 1358, 1404, 1472, 1521, 1568, 1724
Hin6I GCGC 2 cut(s) 623, 1829
HinP1I GCGC 2 cut(s) 623, 1829
HinfI GANTC 9 cut(s) 210, 682, 1157, 1453, 1514, 1559, 1693, 1772, 1913
HphI GGTGA 2 cut(s) 1034, 1953
Hpy166II GTNNAC 4 cut(s) 749, 910, 1315, 1651
Hpy8I GTNNAC 4 cut(s) 749, 910, 1315, 1651
Hpy99I CGWCG 5 cut(s) 98, 139, 481, 649, 876
HpyAV CCTTC 5 cut(s) 176, 972, 1090, 1708, 1997
HpyCH4III ACNGT 5 cut(s) 197, 992, 1079, 1177, 1984
HpyCH4IV ACGT 2 cut(s) 504, 1139
HpyCH4V TGCA 5 cut(s) 517, 679, 1196, 1390, 1580
HpyF10VI GCNNNNNNNGC 8 cut(s) 95, 151, 154, 283, 306, 702, 727, 1246
HpyF3I CTNAG 6 cut(s) 296, 1107, 1250, 1274, 1293, 2012
HpySE526I ACGT 2 cut(s) 504, 1139
Hsp92I GRCGYC 3 cut(s) 96, 476, 1662
Hsp92II CATG 7 cut(s) 1234, 1358, 1404, 1472, 1521, 1568, 1724
HspAI GCGC 2 cut(s) 623, 1829
KpnI GGTACC 1 cut(s) 1204
KroI GCCGGC 2 cut(s) 89, 446
KroNI GCCGGC 2 cut(s) 91, 448
Ksp22I TGATCA 1 cut(s) 1954
Kzo9I GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
LmnI GCTCC 5 cut(s) 4, 291, 1035, 1675, 1683
Lsp1109I GCAGC 5 cut(s) 19, 132, 468, 809, 1347
LweI GCATC 3 cut(s) 871, 1183, 1817
MaeI CTAG 3 cut(s) 1206, 1575, 1998
MaeII ACGT 2 cut(s) 504, 1139
MaeIII GTNAC 3 cut(s) 211, 1073, 1171
MalI GATC 6 cut(s) 132, 282, 614, 890, 1554, 1956
MbiI CCGCTC 1 cut(s) 550
MboI GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
MflI RGATCY 2 cut(s) 130, 1552
MhlI GDGCHC 2 cut(s) 1603, 1680
MluCI AATT 3 cut(s) 238, 315, 382
MlyI GAGTC 4 cut(s) 219, 1166, 1687, 1781
MmeI TCCRAC 3 cut(s) 158, 207, 1956
MroNI GCCGGC 2 cut(s) 89, 446
MseI TTAA 6 cut(s) 110, 189, 236, 1407, 1463, 1836
MspA1I CMGCKG 2 cut(s) 277, 534
MspR9I CCNGG 4 cut(s) 1040, 1056, 1458, 1965
Mva1269I GAATGC 1 cut(s) 1613
MvaI CCWGG 3 cut(s) 1040, 1056, 1458
MvnI CGCG 3 cut(s) 404, 1614, 1758
MwoI GCNNNNNNNGC 8 cut(s) 95, 151, 154, 283, 306, 702, 727, 1246
NaeI GCCGGC 2 cut(s) 91, 448
NciI CCSGG 1 cut(s) 1965
NcoI CCATGG 1 cut(s) 1468
NdeII GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
NgoMIV GCCGGC 2 cut(s) 89, 446
NlaIII CATG 7 cut(s) 1234, 1358, 1404, 1472, 1521, 1568, 1724
NlaIV GGNNCC 9 cut(s) 132, 538, 960, 1037, 1202, 1256, 1269, 1504, 1745
NmeAIII GCCGAG 2 cut(s) 910, 1441
NmuCI GTSAC 2 cut(s) 211, 1171
NruI TCGCGA 1 cut(s) 1758
NspV TTCGAA 1 cut(s) 1940
PctI GAATGC 1 cut(s) 1613
PdiI GCCGGC 2 cut(s) 91, 448
PfeI GAWTC 5 cut(s) 682, 1453, 1514, 1559, 1913
PflFI GACNNNGTC 1 cut(s) 1771
PleI GAGTC 4 cut(s) 218, 1165, 1687, 1780
PpsI GAGTC 4 cut(s) 218, 1165, 1687, 1780
Ppu21I YACGTR 1 cut(s) 1140
PpuMI RGGWCCY 1 cut(s) 959
Psp124BI GAGCTC 1 cut(s) 1680
Psp5II RGGWCCY 1 cut(s) 959
Psp6I CCWGG 3 cut(s) 1038, 1054, 1456
PspFI CCCAGC 1 cut(s) 1740
PspGI CCWGG 3 cut(s) 1038, 1054, 1456
PspN4I GGNNCC 9 cut(s) 132, 538, 960, 1037, 1202, 1256, 1269, 1504, 1745
PspPI GGNCC 4 cut(s) 728, 959, 1052, 1744
PspPPI RGGWCCY 1 cut(s) 959
PsrI GAACNNNNNNTAC 2 cut(s) 20, 52
PstI CTGCAG 1 cut(s) 681
PstNI CAGNNNCTG 1 cut(s) 1928
PsuI RGATCY 2 cut(s) 130, 1552
PsyI GACNNNGTC 1 cut(s) 1771
PvuII CAGCTG 1 cut(s) 277
RruI TCGCGA 1 cut(s) 1758
RsaI GTAC 4 cut(s) 29, 233, 1138, 1202
RsaNI GTAC 4 cut(s) 28, 232, 1137, 1201
SacI GAGCTC 1 cut(s) 1680
SaqAI TTAA 6 cut(s) 110, 189, 236, 1407, 1463, 1836
Sau3AI GATC 6 cut(s) 130, 280, 612, 888, 1552, 1954
Sau96I GGNCC 4 cut(s) 728, 959, 1052, 1744
ScaI AGTACT 1 cut(s) 233
SchI GAGTC 4 cut(s) 219, 1166, 1687, 1781
ScrFI CCNGG 4 cut(s) 1040, 1056, 1458, 1965
SduI GDGCHC 2 cut(s) 1603, 1680
SfaNI GCATC 3 cut(s) 871, 1183, 1817
SfcI CTRYAG 2 cut(s) 677, 1929
SfuI TTCGAA 1 cut(s) 1940
SinI GGWCC 3 cut(s) 959, 1052, 1744
SmlI CTYRAG 3 cut(s) 22, 356, 1187
SmoI CTYRAG 3 cut(s) 22, 356, 1187
SnaBI TACGTA 1 cut(s) 1140
Sse9I AATT 3 cut(s) 238, 315, 382
SspMI CTAG 3 cut(s) 1206, 1575, 1998
SstI GAGCTC 1 cut(s) 1680
StyD4I CCNGG 4 cut(s) 1038, 1054, 1456, 1963
StyI CCWWGG 4 cut(s) 78, 1205, 1468, 1997
TaaI ACNGT 5 cut(s) 197, 992, 1079, 1177, 1984
TaiI ACGT 2 cut(s) 507, 1142
TaqI TCGA 5 cut(s) 122, 255, 761, 1859, 1940
TasI AATT 3 cut(s) 238, 315, 382
TatI WGTACW 1 cut(s) 231
TauI GCSGC 7 cut(s) 157, 498, 537, 550, 623, 721, 1614
TfiI GAWTC 5 cut(s) 682, 1453, 1514, 1559, 1913
Tru1I TTAA 6 cut(s) 110, 189, 236, 1407, 1463, 1836
Tru9I TTAA 6 cut(s) 110, 189, 236, 1407, 1463, 1836
TscAI CASTG 5 cut(s) 132, 1119, 1182, 1397, 1957
TseFI GTSAC 2 cut(s) 211, 1171
TseI GCWGC 5 cut(s) 7, 145, 481, 797, 1335
Tsp45I GTSAC 2 cut(s) 211, 1171
TspDTI ATGAA 4 cut(s) 215, 1343, 1581, 1797
TspGWI ACGGA 3 cut(s) 397, 941, 1736
TspRI CASTG 5 cut(s) 132, 1119, 1182, 1397, 1957
Tth111I GACNNNGTC 1 cut(s) 1771
VpaK11BI GGWCC 3 cut(s) 959, 1052, 1744
XagI CCTNNNNNAGG 2 cut(s) 1712, 2001
XapI RAATTY 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 1 cut(s) 1454
XmaJI CCTAGG 2 cut(s) 1205, 1997
XmiI GTMKAC 2 cut(s) 1314, 1650
XspI CTAG 3 cut(s) 1206, 1575, 1998
ZrmI AGTACT 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.