Rorug05G0009900

Mitochondrial inner membrane protease subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0006032
Physical Location & Seq
Reverse (-)
589976 .. 595678
5703 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0009900.1

Sequence Viewer

Length: 2916 bp
ATGCATGACAGGGCTGATGCCGAGATTGCCGACTACCTAACGATCTACCTGGATCTTTCCAACAATCAACTGATTGGGCCTATACCACAGAGTTTAGGGAATTTGACTTTGGCCGGTTCTATTGATCTGCATGATAACTTTCTCAACGGCTCTATACCAGCATCTTTGGGTGCATTGACTCATTTGTATAGACTGGATTTGCATAACAATGGAATCTCTGGTATTCTCCCACGAAGACTTGGAAATTTGACAAAGCTTGGAACCTTCGACGTCGCATCCAACAGTATTACTGGGACATTACCAAACAAATTCGCCAGCCTTAAGAGCCTGAATGAATTTTCTGTAGCTGGTAACTATTTGTCTGGCCCTTTACCTGACTTCATAGCCAACTGGACTTCAATCTGGGAACTTTATCTCAGCGGAAACAATTTTCTCGGAATTCTACCTGCCGGAATTTTTAATTTATCAGATCTAAAAATTTTGGCAATAAGTGATGTCGGAGCAAACTCTCATTTCCAGTTCCCACCATCAACACATGTGACGACAAGTTTTCGTATTTTGATACTAAGAAACTGCTCAATCACTGGTCAAATTCCATCCTACATTGGAAATATGTCATCATTAAGGAGCCTAGACCTGAGCTTCAACAGCTTAACGGGTAGAATCCCAGATTCTTTGAAAAACATAAATTTAAGTTGGATGTCTTTTACAAACAATATGCTTACTGGGGAAATTCCTAATTGGATTAAAAGTGCAGTCTGGAGTAAGATGGATCTTTCATACAATAATTTTTCAAAACCAACCTTTGCAACACCGTCCAGCTTAGACTTGAATTTGTTTTCTTGTTGTTGTAACTCCTCAATCTGTCTGCCAAATACGTATGACTGGGCGGACCCAACCACGGAGGAGTATTGTCCCGGAGGAAAACCTAATTACCATTCATTGTTTATAAATTGTGGTGGTGGGACACTTAACAACGTTGATGGAAATATTTATGATCAAGATAATGAGACATCGCAGTTTTACCGGAGTCTGAAAGGAAACTGGGCTCGAATTAGTGCTGGAAACACCGTCGACCTTGACTATGCTTCCAATCCAAGTAAAGTTTTAAAAAGTGTGAGATGTGGGCTTTCCTCTGAAGCACCTTTATACGATAGAGCTCGCACTTCCCCTGTCTCTCTAAAATATTACGGGTTCTGTTTACGTAAAGGCAAATACAATGTAACACTTCACTTTGCTGAAATTGTTGATGAGGATAACAATTACAGAAATACAACTAAGCGCGTATTTGATGTGTATATACAGGGTGAGAGGAAACTAAAGGATTTCAACATTATAGACAAGGCAGGAGGTCCGAATACAAAACATACAGAAAATTTCAGGGCTGTTAATGTAAATGATAGTACATTAGAGATCCACTTCTACTCGGCTGGAAAAGGGACTCTTGATCAGGGACCTCTCATATCTGCTATATCCGTAACTCCAGAGTACAAGCTACACGAACAACTATCTCCTTTGCACATAGCGCTCATTACTGTGGCTTCAATCATAGTTTTCGTATTGCTTTTATTGCTTTTTGCCTGGATGATGGGATGGCTGGGTACAGATCACTTACAAGAAATAGATATAGGTCAAGAAAATCCTATCACCCTCAAACAATTAAAAGATGCTACTGGGAATTTTAGCAAGAGGAACGAGATTGGTCAAGGGGGTTTTGGGACAGTTTACAAGGCTGAAGTGCAAGGGAAAATTGTAGCTGTGAAGAAACTTTCCTCTCATTCAGAGGAAAGGATCAATCAATTGATAAATGAGTTTTATACCTTAAAATCAATGAGTCAAGAGAATCTTGTTCAGTTGCTGGACATCTACAACGCAAAAGGCCTGCATTTGCTCGTCTATGAATATATGCAAAACAACTCCCTTGCACACGCCTTATTTGACTCAAAGTCCAAACTGAAACTTGACTGGGAAGCTAGGTTTAATATTTGCTTGGGAATAGCTAGGGGATTGGTGTATCTACATGAGCATCCCAGGCTGAAGATGGTTCACAGAGACATTAAATCAGCTAATATTCTTCTCGATGGAAACCTCAAGGCTAAAATATCAGACTTTGGATTGGCAAGCCTTTACACCGAAGATGATCAATTCAAGTTCATCAAAGTAGAAGTGCCACAGGGATATATGGCACCTGAGTATGTTCGAGGAGTTGTGACAGCTAAAGCTGATGTCTACAGTTTTGGGGTGGTTATACTTGAAACTGTTAGTGGAAGGAAAAATGCAGGACACACGCGAGATAGCCAGGAAAGTGAATTTCTTTTAGACACGGCTTGTGATTTACAGCGAAAAGGAAAACTGGTGGACTTGGTTGATAAAACCTTGTCTAACAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAATGTGCATAAATATATCGCCAACTCTGAGGCCTACTATGTCTGAAGTTTTGAGTGTTCTCGTTGGCGACAAAAAAATTGAGGAGATTTGTTCCCCTGCCCTGAAGGAGCCGATTAAGGACATCAACGACCCCCACGTGAATGAGATTGCGGAGTTTGCGGTGTCGGAGTACAACAAGAAATCCGGGAAGAAGCTGAAGTTACGGAGCGTGGTGAAGGGCGAGACTCAGGTTGTCGCAGGTGAGAATTACCGTCTCGTCATCGTCGTTGAGGATAACTCGGCGGCGGCCAAGTATGAGGGCGTTGTGTACGAGAGGATTTGGGAGCATACTAGGGAATTGCTCTCCTTCGATAGTCACATTGCTCAAGTTGATTCCACTGTTTCTATGGAAGTAACCTCGAAAGCATCCACGTCATCCAATTTGATCAAAGTGGAAGATGAAACAGAACACATTTCTGTGAGTACCCCCCTAGAGATTTCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03060 map03060
Pfam Domains
Protein Families
Peptidase_S24

Protein Analysis

971

Amino Acids

107.86

Weight (kDa)

6.09

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 54 - 142 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 61 - 120 1.1e-06 Leucine rich repeat
Malectin PF11721 314 - 490 2.2e-29 Malectin domain
Pkinase PF00069 562 - 828 5.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 564 - 829 3.8e-43 Protein tyrosine and serine/threonine kinase
Cystatin PF00031 847 - 904 1.9e-12 Cystatin domain
SQAPI PF16845 848 - 927 5.1e-31 Aspartic acid proteinase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 950
AarI CACCTGC 1 cut(s) 2657
AatII GACGTC 1 cut(s) 273
Acc36I ACCTGC 2 cut(s) 454, 2657
AccB1I GGYRCC 1 cut(s) 2185
AccI GTMKAC 2 cut(s) 1074, 2229
AccII CGCG 2 cut(s) 1284, 2290
AciI CCGC 6 cut(s) 420, 890, 2579, 2588, 2711, 2714
AclI AACGTT 1 cut(s) 978
AclWI GGATC 4 cut(s) 60, 780, 1408, 1799
AcoI YGGCCR 2 cut(s) 111, 2715
AcuI CTGAAG 6 cut(s) 1158, 1755, 2057, 2493, 2552, 2645
AcvI CACGTG 1 cut(s) 2566
AcyI GRCGYC 1 cut(s) 270
AfaI GTAC 6 cut(s) 1405, 1490, 1603, 2600, 2738, 2893
AfeI AGCGCT 1 cut(s) 1527
AfiI CCNNNNNNNGG 1 cut(s) 901
AflII CTTAAG 1 cut(s) 320
AflIII ACRYGT 1 cut(s) 535
AhdI GACNNNNNGTC 1 cut(s) 1945
AjiI CACGTC 1 cut(s) 2841
AjnI CCWGG 4 cut(s) 48, 1580, 2030, 2298
AjuI GAANNNNNNNTTGG 2 cut(s) 92, 124
Alw21I GWGCWC 1 cut(s) 1162
Alw26I GTCTC 5 cut(s) 1004, 1180, 2046, 2645, 2687
AlwI GGATC 4 cut(s) 60, 780, 1408, 1799
AlwNI CAGNNNCTG 1 cut(s) 1858
Aor51HI AGCGCT 1 cut(s) 1527
AoxI GGCC 6 cut(s) 77, 111, 364, 1879, 2459, 2715
AspLEI GCGC 2 cut(s) 1284, 1528
AspS9I GGNCC 5 cut(s) 77, 365, 892, 1352, 1454
AsuC2I CCSGG 2 cut(s) 918, 2614
AsuHPI GGTGA 4 cut(s) 1319, 1639, 2653, 2681
AvaII GGWCC 3 cut(s) 892, 1352, 1454
BanI GGYRCC 1 cut(s) 2185
BanII GRGCYC 2 cut(s) 1051, 1162
BbrPI CACGTG 1 cut(s) 2566
BbsI GAAGAC 1 cut(s) 241
Bbv12I GWGCWC 1 cut(s) 1162
BccI CCATC 9 cut(s) 535, 604, 763, 977, 1582, 1587, 2035, 2075, 2414
BceAI ACGGC 2 cut(s) 163, 2340
BciT130I CCWGG 4 cut(s) 50, 1582, 2032, 2300
BclI TGATCA 4 cut(s) 997, 1447, 2140, 2853
BcnI CCSGG 2 cut(s) 918, 2614
BcoDI GTCTC 5 cut(s) 1004, 1180, 2046, 2645, 2687
BfaI CTAG 5 cut(s) 632, 1974, 2001, 2760, 2900
BfmI CTRYAG 2 cut(s) 342, 2230
BfoI RGCGCY 1 cut(s) 1529
BfrI CTTAAG 1 cut(s) 320
BfuAI ACCTGC 2 cut(s) 454, 2657
BglII AGATCT 1 cut(s) 469
BisI GCNGC 2 cut(s) 2712, 2715
BlsI GCNGC 2 cut(s) 2713, 2716
Bme1390I CCNGG 6 cut(s) 50, 918, 1582, 2032, 2300, 2614
Bme18I GGWCC 3 cut(s) 892, 1352, 1454
BmeRI GACNNNNNGTC 1 cut(s) 1945
BmgBI CACGTC 1 cut(s) 2841
BmgT120I GGNCC 5 cut(s) 77, 365, 892, 1352, 1454
BmiI GGNNCC 6 cut(s) 262, 629, 894, 1455, 2187, 2538
BmrFI CCNGG 6 cut(s) 50, 918, 1582, 2032, 2300, 2614
BmrI ACTGGG 6 cut(s) 300, 735, 895, 1054, 1683, 1975
BmsI GCATC 7 cut(s) 7, 170, 284, 1657, 2035, 2383, 2843
BmuI ACTGGG 6 cut(s) 300, 735, 895, 1054, 1683, 1975
BpiI GAAGAC 1 cut(s) 241
BplI GAGNNNNNCTC 2 cut(s) 2690, 2722
BpmI CTGGAG 2 cut(s) 781, 1467
Bpu10I CCTNAGC 1 cut(s) 638
BpuEI CTTGAG 2 cut(s) 2075, 2778
BpuMI CCSGG 2 cut(s) 918, 2614
BsaAI YACGTR 3 cut(s) 879, 1205, 2566
BsaHI GRCGYC 1 cut(s) 270
BsaJI CCNNGG 2 cut(s) 900, 2030
BsaWI WCCGGW 1 cut(s) 1026
Bsc4I CCNNNNNNNGG 1 cut(s) 901
Bse118I RCCGGY 1 cut(s) 113
Bse3DI GCAATG 1 cut(s) 2787
BseBI CCWGG 4 cut(s) 50, 1582, 2032, 2300
BseDI CCNNGG 2 cut(s) 900, 2030
BseGI GGATG 8 cut(s) 275, 596, 705, 1590, 1598, 2026, 2834, 2843
BseLI CCNNNNNNNGG 1 cut(s) 901
BseMI GCAATG 1 cut(s) 2787
BseMII CTCAG 5 cut(s) 430, 629, 2181, 2447, 2669
BseRI GAGGAG 4 cut(s) 847, 920, 2217, 2525
BseYI CCCAGC 1 cut(s) 1597
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 2 cut(s) 1284, 2290
BshFI GGCC 6 cut(s) 79, 113, 366, 1881, 2461, 2717
BshNI GGYRCC 1 cut(s) 2185
BsiHKAI GWGCWC 1 cut(s) 1162
BsiSI CCGG 5 cut(s) 114, 450, 918, 1027, 2613
BslFI GGGAC 6 cut(s) 307, 900, 979, 1453, 1467, 1732
BslI CCNNNNNNNGG 1 cut(s) 901
BsmAI GTCTC 5 cut(s) 1004, 1180, 2046, 2645, 2687
BsmBI CGTCTC 1 cut(s) 2687
BsmFI GGGAC 6 cut(s) 307, 900, 979, 1453, 1467, 1732
BsnI GGCC 6 cut(s) 79, 113, 366, 1881, 2461, 2717
Bsp1286I GDGCHC 2 cut(s) 1051, 1162
BspACI CCGC 6 cut(s) 420, 890, 2579, 2588, 2711, 2714
BspANI GGCC 6 cut(s) 79, 113, 366, 1881, 2461, 2717
BspCNI CTCAG 5 cut(s) 429, 630, 2182, 2448, 2668
BspFNI CGCG 2 cut(s) 1284, 2290
BspLI GGNNCC 6 cut(s) 262, 629, 894, 1455, 2187, 2538
BspMI ACCTGC 2 cut(s) 454, 2657
BspPI GGATC 4 cut(s) 60, 780, 1408, 1799
BspT107I GGYRCC 1 cut(s) 2185
BspTI CTTAAG 1 cut(s) 320
BsrDI GCAATG 1 cut(s) 2787
BsrFI RCCGGY 1 cut(s) 113
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 2 cut(s) 900, 2030
BssNI GRCGYC 1 cut(s) 270
Bst2UI CCWGG 4 cut(s) 50, 1582, 2032, 2300
Bst4CI ACNGT 9 cut(s) 284, 816, 1072, 1537, 1723, 2234, 2260, 2681, 2809
BstACI GRCGYC 1 cut(s) 270
BstAFI CTTAAG 1 cut(s) 320
BstBAI YACGTR 3 cut(s) 879, 1205, 2566
BstC8I GCNNGC 4 cut(s) 316, 1162, 1883, 2122
BstDEI CTNAG 8 cut(s) 416, 566, 638, 823, 1278, 2190, 2456, 2655
BstDSI CCRYGG 1 cut(s) 900
BstF5I GGATG 8 cut(s) 275, 596, 705, 1590, 1598, 2026, 2834, 2843
BstFNI CGCG 2 cut(s) 1284, 2290
BstH2I RGCGCY 1 cut(s) 1529
BstHHI GCGC 2 cut(s) 1284, 1528
BstMAI GTCTC 5 cut(s) 1004, 1180, 2046, 2645, 2687
BstMWI GCNNNNNNNGC 8 cut(s) 26, 324, 648, 1525, 1570, 2032, 2402, 2585
BstNI CCWGG 4 cut(s) 50, 1582, 2032, 2300
BstNSI RCATGY 1 cut(s) 539
BstSCI CCNGG 6 cut(s) 48, 916, 1580, 2030, 2298, 2612
BstSFI CTRYAG 2 cut(s) 342, 2230
BstSNI TACGTA 2 cut(s) 879, 1205
BstUI CGCG 2 cut(s) 1284, 2290
BstV2I GAAGAC 1 cut(s) 241
BstX2I RGATCY 4 cut(s) 52, 469, 772, 1413
BstYI RGATCY 4 cut(s) 52, 469, 772, 1413
BsuRI GGCC 6 cut(s) 79, 113, 366, 1881, 2461, 2717
BtgI CCRYGG 1 cut(s) 900
BtgZI GCGATG 1 cut(s) 999
BtrI CACGTC 1 cut(s) 2841
BtsCI GGATG 8 cut(s) 275, 596, 705, 1590, 1598, 2026, 2834, 2843
BtsIMutI CAGTG 2 cut(s) 582, 2805
BveI ACCTGC 2 cut(s) 454, 2657
Cac8I GCNNGC 4 cut(s) 316, 1162, 1883, 2122
CaiI CAGNNNCTG 1 cut(s) 1858
CfoI GCGC 2 cut(s) 1284, 1528
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 5 cut(s) 77, 365, 892, 1352, 1454
Csp6I GTAC 6 cut(s) 1404, 1489, 1602, 2599, 2737, 2892
CviAII CATG 4 cut(s) 5, 131, 536, 2021
CviQI GTAC 6 cut(s) 1404, 1489, 1602, 2599, 2737, 2892
DdeI CTNAG 8 cut(s) 416, 566, 638, 823, 1278, 2190, 2456, 2655
DraI TTTAAA 1 cut(s) 1110
DriI GACNNNNNGTC 1 cut(s) 1945
EaeI YGGCCR 2 cut(s) 111, 2715
Eam1105I GACNNNNNGTC 1 cut(s) 1945
EciI GGCGGA 1 cut(s) 905
Ecl136II GAGCTC 1 cut(s) 1160
Eco105I TACGTA 2 cut(s) 879, 1205
Eco147I AGGCCT 2 cut(s) 1881, 2461
Eco24I GRGCYC 2 cut(s) 1051, 1162
Eco47I GGWCC 3 cut(s) 892, 1352, 1454
Eco47III AGCGCT 1 cut(s) 1527
Eco53kI GAGCTC 1 cut(s) 1160
Eco57I CTGAAG 6 cut(s) 1158, 1755, 2057, 2493, 2552, 2645
Eco72I CACGTG 1 cut(s) 2566
EcoICRI GAGCTC 1 cut(s) 1160
EcoO109I RGGNCCY 1 cut(s) 1454
EcoRI GAATTC 1 cut(s) 438
EcoRII CCWGG 4 cut(s) 48, 1580, 2030, 2298
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 1051, 1162
Esp3I CGTCTC 1 cut(s) 2687
FaeI CATG 4 cut(s) 8, 134, 539, 2024
FalI AAGNNNNNCTT 4 cut(s) 1428, 1460, 1830, 1862
FaqI GGGAC 6 cut(s) 307, 900, 979, 1453, 1467, 1732
FatI CATG 4 cut(s) 4, 130, 535, 2020
FbaI TGATCA 4 cut(s) 997, 1447, 2140, 2853
FblI GTMKAC 2 cut(s) 1074, 2229
Fnu4HI GCNGC 2 cut(s) 2712, 2715
FokI GGATG 8 cut(s) 262, 583, 712, 1597, 1605, 2013, 2821, 2830
FriOI GRGCYC 2 cut(s) 1051, 1162
Fsp4HI GCNGC 2 cut(s) 2712, 2715
FspBI CTAG 5 cut(s) 632, 1974, 2001, 2760, 2900
GlaI GCGC 2 cut(s) 1283, 1527
GluI GCNGC 2 cut(s) 2712, 2715
GsaI CCCAGC 1 cut(s) 1601
GsuI CTGGAG 2 cut(s) 781, 1467
HaeII RGCGCY 1 cut(s) 1529
HaeIII GGCC 6 cut(s) 79, 113, 366, 1881, 2461, 2717
HapII CCGG 5 cut(s) 114, 450, 918, 1027, 2613
HhaI GCGC 2 cut(s) 1284, 1528
Hin1I GRCGYC 1 cut(s) 270
Hin1II CATG 4 cut(s) 8, 134, 539, 2024
Hin6I GCGC 2 cut(s) 1282, 1526
HinP1I GCGC 2 cut(s) 1282, 1526
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HindIII AAGCTT 1 cut(s) 254
HpaII CCGG 5 cut(s) 114, 450, 918, 1027, 2613
HphI GGTGA 4 cut(s) 1319, 1639, 2653, 2681
Hpy166II GTNNAC 7 cut(s) 1075, 1202, 1726, 2047, 2230, 2359, 2737
Hpy188III TCNNGA 8 cut(s) 760, 1001, 1445, 1484, 1634, 1838, 2078, 2416
Hpy8I GTNNAC 7 cut(s) 1075, 1202, 1726, 2047, 2230, 2359, 2737
Hpy99I CGWCG 4 cut(s) 272, 275, 1076, 2696
HpyAV CCTTC 5 cut(s) 274, 2262, 2527, 2638, 2785
HpyCH4III ACNGT 9 cut(s) 284, 816, 1072, 1537, 1723, 2234, 2260, 2681, 2809
HpyCH4IV ACGT 6 cut(s) 270, 878, 978, 1204, 2565, 2840
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 324, 648, 1525, 1570, 2032, 2402, 2585
HpyF3I CTNAG 8 cut(s) 416, 566, 638, 823, 1278, 2190, 2456, 2655
HpySE526I ACGT 6 cut(s) 270, 878, 978, 1204, 2565, 2840
Hsp92I GRCGYC 1 cut(s) 270
Hsp92II CATG 4 cut(s) 8, 134, 539, 2024
HspAI GCGC 2 cut(s) 1282, 1526
Ksp22I TGATCA 4 cut(s) 997, 1447, 2140, 2853
LmnI GCTCC 5 cut(s) 500, 627, 2536, 2634, 2752
LweI GCATC 7 cut(s) 7, 170, 284, 1657, 2035, 2383, 2843
MaeI CTAG 5 cut(s) 632, 1974, 2001, 2760, 2900
MaeII ACGT 6 cut(s) 270, 878, 978, 1204, 2565, 2840
MaeIII GTNAC 9 cut(s) 350, 538, 851, 1222, 1477, 2209, 2628, 2783, 2821
MboII GAAGA 7 cut(s) 246, 1774, 2050, 2066, 2147, 2629, 2876
MfeI CAATTG 1 cut(s) 1799
MflI RGATCY 4 cut(s) 52, 469, 772, 1413
MhlI GDGCHC 2 cut(s) 1051, 1162
MlyI GAGTC 6 cut(s) 172, 1039, 1435, 1843, 1934, 2647
MmeI TCCRAC 5 cut(s) 84, 303, 478, 677, 2574
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 4 cut(s) 207, 1535, 2568, 2885
MspA1I CMGCKG 1 cut(s) 420
MspCI CTTAAG 1 cut(s) 320
MspI CCGG 5 cut(s) 114, 450, 918, 1027, 2613
MspR9I CCNGG 6 cut(s) 50, 918, 1582, 2032, 2300, 2614
MunI CAATTG 1 cut(s) 1799
MvaI CCWGG 4 cut(s) 50, 1582, 2032, 2300
MvnI CGCG 2 cut(s) 1284, 2290
MwoI GCNNNNNNNGC 8 cut(s) 26, 324, 648, 1525, 1570, 2032, 2402, 2585
NciI CCSGG 2 cut(s) 918, 2614
NlaIII CATG 4 cut(s) 8, 134, 539, 2024
NlaIV GGNNCC 6 cut(s) 262, 629, 894, 1455, 2187, 2538
NmeAIII GCCGAG 3 cut(s) 46, 1406, 2687
NmuCI GTSAC 3 cut(s) 538, 2209, 2783
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 539
PaqCI CACCTGC 1 cut(s) 2657
PceI AGGCCT 2 cut(s) 1881, 2461
PciI ACATGT 1 cut(s) 535
PcsI WCGNNNNNNNCGW 2 cut(s) 2562, 2691
PfeI GAWTC 5 cut(s) 213, 663, 671, 1843, 2801
PfoI TCCNGGA 2 cut(s) 916, 2612
PkrI GCNGC 2 cut(s) 2713, 2716
PleI GAGTC 6 cut(s) 172, 1038, 1435, 1842, 1934, 2647
PmaCI CACGTG 1 cut(s) 2566
PmlI CACGTG 1 cut(s) 2566
PpsI GAGTC 6 cut(s) 172, 1038, 1435, 1842, 1934, 2647
Ppu21I YACGTR 3 cut(s) 879, 1205, 2566
PpuMI RGGWCCY 1 cut(s) 1454
PscI ACATGT 1 cut(s) 535
PsiI TTATAA 1 cut(s) 950
Psp124BI GAGCTC 1 cut(s) 1162
Psp1406I AACGTT 1 cut(s) 978
Psp5II RGGWCCY 1 cut(s) 1454
Psp6I CCWGG 4 cut(s) 48, 1580, 2030, 2298
PspCI CACGTG 1 cut(s) 2566
PspFI CCCAGC 1 cut(s) 1597
PspGI CCWGG 4 cut(s) 48, 1580, 2030, 2298
PspN4I GGNNCC 6 cut(s) 262, 629, 894, 1455, 2187, 2538
PspPI GGNCC 5 cut(s) 77, 365, 892, 1352, 1454
PspPPI RGGWCCY 1 cut(s) 1454
PstNI CAGNNNCTG 1 cut(s) 1858
PsuI RGATCY 4 cut(s) 52, 469, 772, 1413
RsaI GTAC 6 cut(s) 1405, 1490, 1603, 2600, 2738, 2893
RsaNI GTAC 6 cut(s) 1404, 1489, 1602, 2599, 2737, 2892
RseI CAYNNNNRTG 4 cut(s) 207, 1535, 2568, 2885
SacI GAGCTC 1 cut(s) 1162
SalI GTCGAC 1 cut(s) 1073
SatI GCNGC 2 cut(s) 2712, 2715
Sau96I GGNCC 5 cut(s) 77, 365, 892, 1352, 1454
SchI GAGTC 6 cut(s) 172, 1039, 1435, 1843, 1934, 2647
ScrFI CCNGG 6 cut(s) 50, 918, 1582, 2032, 2300, 2614
SduI GDGCHC 2 cut(s) 1051, 1162
SfaNI GCATC 7 cut(s) 7, 170, 284, 1657, 2035, 2383, 2843
SfcI CTRYAG 2 cut(s) 342, 2230
SinI GGWCC 3 cut(s) 892, 1352, 1454
SmiMI CAYNNNNRTG 4 cut(s) 207, 1535, 2568, 2885
SmlI CTYRAG 3 cut(s) 320, 2090, 2793
SmoI CTYRAG 3 cut(s) 320, 2090, 2793
SnaBI TACGTA 2 cut(s) 879, 1205
SseBI AGGCCT 2 cut(s) 1881, 2461
SsiI CCGC 6 cut(s) 420, 890, 2579, 2588, 2711, 2714
SspI AATATT 4 cut(s) 991, 1187, 1984, 2071
SspMI CTAG 5 cut(s) 632, 1974, 2001, 2760, 2900
SstI GAGCTC 1 cut(s) 1162
StuI AGGCCT 2 cut(s) 1881, 2461
StyD4I CCNGG 6 cut(s) 48, 916, 1580, 2030, 2298, 2612
TaaI ACNGT 9 cut(s) 284, 816, 1072, 1537, 1723, 2234, 2260, 2681, 2809
TaiI ACGT 6 cut(s) 273, 881, 981, 1207, 2568, 2843
TaqI TCGA 7 cut(s) 267, 1051, 1074, 2079, 2200, 2778, 2828
TatI WGTACW 3 cut(s) 1403, 1488, 2598
TauI GCSGC 2 cut(s) 2714, 2717
TfiI GAWTC 5 cut(s) 213, 663, 671, 1843, 2801
TscAI CASTG 2 cut(s) 589, 2812
TseFI GTSAC 3 cut(s) 538, 2209, 2783
Tsp45I GTSAC 3 cut(s) 538, 2209, 2783
TspDTI ATGAA 7 cut(s) 348, 370, 768, 930, 1914, 2143, 2883
TspGWI ACGGA 3 cut(s) 917, 1465, 2647
TspRI CASTG 2 cut(s) 589, 2812
Vha464I CTTAAG 1 cut(s) 320
VpaK11BI GGWCC 3 cut(s) 892, 1352, 1454
XceI RCATGY 1 cut(s) 539
XcmI CCANNNNNNNNNTGG 2 cut(s) 2038, 2812
XmiI GTMKAC 2 cut(s) 1074, 2229
XspI CTAG 5 cut(s) 632, 1974, 2001, 2760, 2900
ZraI GACGTC 1 cut(s) 271
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.