Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006920

Physical Location & Seq

Genomic Coordinates Forward (+)

3989878 .. 3992680

Gene Structure 2803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0045600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGACCGACCCGACTCCTCCGACTCCTCCCGGCCCGTACTCTCCGACCGGGTCCTCATAAACGGCGCCGTAACGCCGGTCACGTTCTTCGCCGACGGCGTGCTGCGGTGGACGGAGAGAGGCGAGAGGAGCTTGATCGTCGAGAAGGAGGTCCTCTGGGTCAAAGTGGAGGGTCCGAAGATCAGAATCGGAGCTCTGGTCGACGGCGGAGGTGGAATCTGCTGCGTCGGCAGTAGCGGAGGAGGTCTGGTCAGGAAGGACTTGGTGTTCGAGCCTTTATCAGAGGACTCGCAGAGGCTCTGGTGCCAGAAGCTTCTCGAATTCATCGATTCTCTCGGACGGCCGAAGAGGTTGTTTGTGTTTGTGAATCCATTTGGAGGGAGCAAATCTGCTTCGAAGATTTTTGTTGATGAAGTGAAGCCGCTTTTTGATGATGCTGGTGTTCAGTTTACACTGCAAGAAACTCAGTATCAACTGCACGCGAAGGAAGTTGCGAAAACTCTAGATCTTTCGAAGTATGATGGCATTGTTTGCGTCAGTGGGGATGGAATCTTGGTTGAGGTAGTAAATGGACTTCTTGAGAGACAGGATTGGGACACTGCAATAAAGATGCCTCTCGGAGTAGTTCCTGCAGGTACTGGAAATGGAATGGCGAAATCTCTTCTAGATTCTGTTGGTGAACCTTGTAAAGTATCAAATGCTGTTCTCGCCATTATTAGAGGACATAAGCGTTCATTGGATGTAGCTACCATATGGCAGGGGAAGACAAAATTTTTTAGTGTGTTGATGCTCGCATGGGGCTTAGTAGCAGATGTTGACATTGAGTCTGAAAAGTATAGGTGGATGGGAAGTGCTCGTCTAGATTTCTATGCCATTCAACGAATTGTGCATTTGAGGCAATATAACGGATCTATTTCTTTTGTGCCTGCACCTGGCTTCGAAGGGTTTGGAGAGCCTACTAGTTACAATGACGATGATGAATCTACTAACACTGATCCAAGTCAAGAAAAGCCTACTAAGGTTCGACAACTCGGCTATGAGGGACCTGATATTAATCTAAAGAACATGAACTGGAGAACAATCAAAGGACCGTTTGTTTCAGTGTGGCTTCACAATGTACCTTGGGGAGGTGAAGACACAAGGGCAGCTCCTGATGCCAAGTTCTCAGATGGTTATCTAGACGTTATAATTATGAGGGCTTGCCCAAAATTGTCCTTGCTCTCGTTAATGACGGGGTTGAGCACTGGGACTCATGTCAAGTCACCATATGTGCTATACTTCAAGGTGAAAGCTTTCATTCTAGAGCCTGGTGCTCTCGCTGATGATTCAACAAAGGAAGGGATAGTGGACTCAGATGGTGAGGTCCTTGCTAGGGGCAAAGGAGCATACAAATGTCATCAGAAAACACTAATGGTGTACGATAAACTTCAAATAACTTTGGATCAAGGTTTAGCCACTCTGTTTTCCCCTTCCCCGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

DHHA2

Protein Analysis

493

Amino Acids

54.08

Weight (kDa)

5.7

Isoelectric Point (pI)

33.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	117 - 250	1.4e-31	Diacylglycerol kinase catalytic domain
YegS_C	PF19279	366 - 470	4.4e-12	YegS C-terminal NAD kinase beta sandwich-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006920)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11620
malus_domestica	MD05G1261900.v1.1 MD10G1240200.v1.1
prunus_persica	Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1 Prupe.4G103700_v2.0.a1
pyrus_communis	pycom05g24560 pycom10g20080 pycom10g20090
rosa_chinensis	RchiOBHm_Chr5g0018641
rosa_laevigata	RLG00000032385
rosa_multiflora	Rmu_co8466739.1_g000001 Rmu_sc0001848.1_g000002 Rmu_sc0008501.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059110
rosa_rugosa	Rorug05G0045600
rosa_samantha	Rh5AG136800 Rh5BG135600 Rh5CG147500 Rh5DG136800
rosa_wichuraiana	Rw5G012120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1187
Acc36I	ACCTGC	1 cut(s)	623
AccB1I	GGYRCC	2 cut(s)	65, 303
AccI	GTMKAC	1 cut(s)	201
AccII	CGCG	1 cut(s)	482
AciI	CCGC	4 cut(s)	106, 207, 237, 422
AclWI	GGATC	3 cut(s)	916, 989, 1449
AcoI	YGGCCR	1 cut(s)	341
AcsI	RAATTY	2 cut(s)	320, 770
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	4 cut(s)	39, 637, 1119, 1418
AfiI	CCNNNNNNNGG	5 cut(s)	377, 932, 1127, 1372, 1474
AgsI	TTSAA	4 cut(s)	878, 1282, 1329, 1430
AhdI	GACNNNNNGTC	1 cut(s)	823
AhlI	ACTAGT	1 cut(s)	959
AjnI	CCWGG	2 cut(s)	931, 1306
AloI	GAACNNNNNNTCC	2 cut(s)	251, 283
AluBI	AGCT	6 cut(s)	132, 194, 313, 746, 1148, 1292
AluI	AGCT	6 cut(s)	132, 194, 313, 746, 1148, 1292
Alw21I	GWGCWC	4 cut(s)	196, 856, 1244, 1315
Alw26I	GTCTC	1 cut(s)	577
AlwI	GGATC	3 cut(s)	916, 989, 1449
AlwNI	CAGNNNCTG	2 cut(s)	638, 1151
AoxI	GGCC	2 cut(s)	32, 341
ApeKI	GCWGC	3 cut(s)	103, 222, 1145
ApoI	RAATTY	2 cut(s)	320, 770
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
AseI	ATTAAT	1 cut(s)	1053
Asp700I	GAANNNNTTC	1 cut(s)	1292
AspLEI	GCGC	1 cut(s)	68
AspS9I	GGNCC	8 cut(s)	4, 33, 52, 151, 173, 1043, 1088, 1363
AsuC2I	CCSGG	3 cut(s)	31, 50, 1475
AsuHPI	GGTGA	5 cut(s)	689, 1142, 1254, 1297, 1370
AsuII	TTCGAA	3 cut(s)	395, 512, 939
AvaII	GGWCC	7 cut(s)	4, 52, 151, 173, 1043, 1088, 1363
BanI	GGYRCC	2 cut(s)	65, 303
BanII	GRGCYC	1 cut(s)	196
BarI	GAAGNNNNNNTAC	2 cut(s)	558, 590
BbsI	GAAGAC	2 cut(s)	770, 1140
Bbv12I	GWGCWC	4 cut(s)	196, 856, 1244, 1315
BbvI	GCAGC	3 cut(s)	90, 209, 1157
BccI	CCATC	5 cut(s)	515, 539, 838, 1163, 1349
BceAI	ACGGC	5 cut(s)	53, 79, 112, 220, 356
BciT130I	CCWGG	2 cut(s)	933, 1308
BcnI	CCSGG	3 cut(s)	31, 50, 1475
BcoDI	GTCTC	1 cut(s)	577
BcuI	ACTAGT	1 cut(s)	959
BfaI	CTAG	7 cut(s)	503, 665, 860, 960, 1178, 1301, 1371
BfmI	CTRYAG	1 cut(s)	630
BfoI	RGCGCY	1 cut(s)	69
BfuAI	ACCTGC	1 cut(s)	623
BglII	AGATCT	1 cut(s)	505
BisI	GCNGC	4 cut(s)	104, 223, 422, 1146
BlsI	GCNGC	4 cut(s)	105, 224, 423, 1147
Bme1390I	CCNGG	5 cut(s)	31, 50, 933, 1308, 1475
Bme18I	GGWCC	7 cut(s)	4, 52, 151, 173, 1043, 1088, 1363
BmeRI	GACNNNNNGTC	1 cut(s)	823
BmgT120I	GGNCC	8 cut(s)	4, 33, 52, 151, 173, 1043, 1088, 1363
BmiI	GGNNCC	5 cut(s)	53, 67, 174, 305, 1044
BmrFI	CCNGG	5 cut(s)	31, 50, 933, 1308, 1475
BmrI	ACTGGG	1 cut(s)	1254
BmsI	GCATC	4 cut(s)	424, 600, 777, 1144
BmuI	ACTGGG	1 cut(s)	1254
BoxI	GACNNNNGTC	1 cut(s)	1253
BpiI	GAAGAC	2 cut(s)	770, 1140
BpmI	CTGGAG	1 cut(s)	1093
Bpu14I	TTCGAA	3 cut(s)	395, 512, 939
BpuEI	CTTGAG	1 cut(s)	599
BpuMI	CCSGG	3 cut(s)	31, 50, 1475
Bsa29I	ATCGAT	1 cut(s)	327
BsaBI	GATNNNNATC	3 cut(s)	185, 1053, 1173
BsaHI	GRCGYC	1 cut(s)	66
BsaJI	CCNNGG	2 cut(s)	1121, 1473
BsaXI	ACNNNNNCTCC	4 cut(s)	183, 213, 234, 264
Bsc4I	CCNNNNNNNGG	5 cut(s)	377, 932, 1127, 1372, 1474
Bse118I	RCCGGY	1 cut(s)	76
Bse1I	ACTGG	3 cut(s)	643, 1076, 1249
Bse8I	GATNNNNATC	3 cut(s)	185, 1053, 1173
BseBI	CCWGG	2 cut(s)	933, 1308
BseCI	ATCGAT	1 cut(s)	327
BseDI	CCNNGG	2 cut(s)	1121, 1473
BseGI	GGATG	3 cut(s)	550, 745, 849
BseJI	GATNNNNATC	3 cut(s)	185, 1053, 1173
BseLI	CCNNNNNNNGG	5 cut(s)	377, 932, 1127, 1372, 1474
BseMII	CTCAG	3 cut(s)	479, 1179, 1365
BseNI	ACTGG	3 cut(s)	643, 1076, 1249
BseRI	GAGGAG	4 cut(s)	7, 16, 142, 255
BseX3I	CGGCCG	1 cut(s)	341
BseXI	GCAGC	3 cut(s)	90, 209, 1157
BsgI	GTGCAG	2 cut(s)	461, 912
Bsh1236I	CGCG	1 cut(s)	482
Bsh1285I	CGRYCG	2 cut(s)	49, 344
BshFI	GGCC	2 cut(s)	34, 343
BshNI	GGYRCC	2 cut(s)	65, 303
BshVI	ATCGAT	1 cut(s)	327
BsiEI	CGRYCG	2 cut(s)	49, 344
BsiHKAI	GWGCWC	4 cut(s)	196, 856, 1244, 1315
BsiSI	CCGG	4 cut(s)	31, 49, 77, 1475
BslFI	GGGAC	3 cut(s)	608, 1056, 1261
BslI	CCNNNNNNNGG	5 cut(s)	377, 932, 1127, 1372, 1474
BsmAI	GTCTC	1 cut(s)	577
BsmFI	GGGAC	3 cut(s)	608, 1056, 1261
BsnI	GGCC	2 cut(s)	34, 343
Bsp119I	TTCGAA	3 cut(s)	395, 512, 939
Bsp1286I	GDGCHC	4 cut(s)	196, 856, 1244, 1315
Bsp143I	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
BspACI	CCGC	4 cut(s)	106, 207, 237, 422
BspANI	GGCC	2 cut(s)	34, 343
BspCNI	CTCAG	3 cut(s)	478, 1178, 1364
BspDI	ATCGAT	1 cut(s)	327
BspFNI	CGCG	1 cut(s)	482
BspLI	GGNNCC	5 cut(s)	53, 67, 174, 305, 1044
BspMAI	CTGCAG	1 cut(s)	634
BspMI	ACCTGC	1 cut(s)	623
BspPI	GGATC	3 cut(s)	916, 989, 1449
BspT104I	TTCGAA	3 cut(s)	395, 512, 939
BspT107I	GGYRCC	2 cut(s)	65, 303
BsrFI	RCCGGY	1 cut(s)	76
BsrI	ACTGG	3 cut(s)	643, 1076, 1249
BssAI	RCCGGY	1 cut(s)	76
BssECI	CCNNGG	2 cut(s)	1121, 1473
BssMI	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
BssNI	GRCGYC	1 cut(s)	66
BssT1I	CCWWGG	1 cut(s)	1121
Bst2UI	CCWGG	2 cut(s)	933, 1308
Bst4CI	ACNGT	1 cut(s)	1092
Bst6I	CTCTTC	2 cut(s)	341, 666
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	1 cut(s)	531
BstBI	TTCGAA	3 cut(s)	395, 512, 939
BstC8I	GCNNGC	5 cut(s)	101, 480, 792, 927, 1201
BstDEI	CTNAG	5 cut(s)	465, 802, 1017, 1165, 1351
BstENI	CCTNNNNNAGG	1 cut(s)	1125
BstF5I	GGATG	3 cut(s)	550, 745, 849
BstFNI	CGCG	1 cut(s)	482
BstH2I	RGCGCY	1 cut(s)	69
BstHHI	GCGC	1 cut(s)	68
BstKTI	GATC	6 cut(s)	138, 183, 508, 911, 997, 1444
BstMAI	GTCTC	1 cut(s)	577
BstMBI	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
BstMCI	CGRYCG	2 cut(s)	49, 344
BstMWI	GCNNNNNNNGC	6 cut(s)	129, 228, 531, 707, 895, 1154
BstNI	CCWGG	2 cut(s)	933, 1308
BstPAI	GACNNNNGTC	1 cut(s)	1253
BstSCI	CCNGG	5 cut(s)	29, 48, 931, 1306, 1473
BstSFI	CTRYAG	1 cut(s)	630
BstUI	CGCG	1 cut(s)	482
BstV1I	GCAGC	3 cut(s)	90, 209, 1157
BstV2I	GAAGAC	2 cut(s)	770, 1140
BstX2I	RGATCY	2 cut(s)	505, 908
BstYI	RGATCY	2 cut(s)	505, 908
BstZI	CGGCCG	1 cut(s)	341
Bsu15I	ATCGAT	1 cut(s)	327
BsuRI	GGCC	2 cut(s)	34, 343
BsuTUI	ATCGAT	1 cut(s)	327
BtsCI	GGATG	3 cut(s)	550, 745, 849
BtsI	GCAGTG	2 cut(s)	452, 597
BtsIMutI	CAGTG	6 cut(s)	452, 544, 597, 990, 1107, 1242
BveI	ACCTGC	1 cut(s)	623
Cac8I	GCNNGC	5 cut(s)	101, 480, 792, 927, 1201
CaiI	CAGNNNCTG	2 cut(s)	638, 1151
CfoI	GCGC	1 cut(s)	68
Cfr10I	RCCGGY	1 cut(s)	76
Cfr13I	GGNCC	8 cut(s)	4, 33, 52, 151, 173, 1043, 1088, 1363
ClaI	ATCGAT	1 cut(s)	327
CseI	GACGC	2 cut(s)	214, 523
Csp6I	GTAC	4 cut(s)	38, 636, 1118, 1417
CviAII	CATG	3 cut(s)	795, 1066, 1253
CviQI	GTAC	4 cut(s)	38, 636, 1118, 1417
DdeI	CTNAG	5 cut(s)	465, 802, 1017, 1165, 1351
DinI	GGCGCC	1 cut(s)	67
DpnI	GATC	6 cut(s)	137, 182, 507, 910, 996, 1443
DpnII	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
DriI	GACNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	341
EagI	CGGCCG	1 cut(s)	341
Eam1104I	CTCTTC	2 cut(s)	341, 666
Eam1105I	GACNNNNNGTC	1 cut(s)	823
EarI	CTCTTC	2 cut(s)	341, 666
EciI	GGCGGA	1 cut(s)	222
Ecl136II	GAGCTC	1 cut(s)	194
EclXI	CGGCCG	1 cut(s)	341
Eco130I	CCWWGG	1 cut(s)	1121
Eco24I	GRGCYC	1 cut(s)	196
Eco47I	GGWCC	7 cut(s)	4, 52, 151, 173, 1043, 1088, 1363
Eco52I	CGGCCG	1 cut(s)	341
Eco53kI	GAGCTC	1 cut(s)	194
EcoICRI	GAGCTC	1 cut(s)	194
EcoNI	CCTNNNNNAGG	1 cut(s)	1125
EcoO109I	RGGNCCY	4 cut(s)	52, 151, 1043, 1363
EcoRI	GAATTC	1 cut(s)	320
EcoRII	CCWGG	2 cut(s)	931, 1306
EcoT14I	CCWWGG	1 cut(s)	1121
EcoT38I	GRGCYC	1 cut(s)	196
EgeI	GGCGCC	1 cut(s)	67
EheI	GGCGCC	1 cut(s)	67
ErhI	CCWWGG	1 cut(s)	1121
FaeI	CATG	3 cut(s)	798, 1069, 1256
FaqI	GGGAC	3 cut(s)	608, 1056, 1261
FatI	CATG	3 cut(s)	794, 1065, 1252
FauNDI	CATATG	2 cut(s)	752, 1267
FblI	GTMKAC	1 cut(s)	201
Fnu4HI	GCNGC	4 cut(s)	104, 223, 422, 1146
FokI	GGATG	3 cut(s)	557, 752, 856
FriOI	GRGCYC	1 cut(s)	196
Fsp4HI	GCNGC	4 cut(s)	104, 223, 422, 1146
FspBI	CTAG	7 cut(s)	503, 665, 860, 960, 1178, 1301, 1371
GlaI	GCGC	1 cut(s)	67
GluI	GCNGC	4 cut(s)	104, 223, 422, 1146
GsuI	CTGGAG	1 cut(s)	1093
HaeII	RGCGCY	1 cut(s)	69
HaeIII	GGCC	2 cut(s)	34, 343
HapII	CCGG	4 cut(s)	31, 49, 77, 1475
HgaI	GACGC	2 cut(s)	214, 523
HhaI	GCGC	1 cut(s)	68
Hin1I	GRCGYC	1 cut(s)	66
Hin1II	CATG	3 cut(s)	798, 1069, 1256
Hin6I	GCGC	1 cut(s)	66
HinP1I	GCGC	1 cut(s)	66
HincII	GTYRAC	2 cut(s)	202, 817
HindII	GTYRAC	2 cut(s)	202, 817
HindIII	AAGCTT	2 cut(s)	311, 1290
HpaII	CCGG	4 cut(s)	31, 49, 77, 1475
HphI	GGTGA	5 cut(s)	689, 1142, 1254, 1297, 1370
Hpy166II	GTNNAC	7 cut(s)	111, 202, 450, 680, 817, 1348, 1417
Hpy8I	GTNNAC	7 cut(s)	111, 202, 450, 680, 817, 1348, 1417
Hpy99I	CGWCG	4 cut(s)	98, 143, 206, 230
HpyAV	CCTTC	6 cut(s)	139, 250, 478, 935, 1331, 1479
HpyCH4III	ACNGT	1 cut(s)	1092
HpyCH4IV	ACGT	2 cut(s)	83, 1182
HpyCH4V	TGCA	6 cut(s)	457, 478, 602, 632, 889, 929
HpyF10VI	GCNNNNNNNGC	6 cut(s)	129, 228, 531, 707, 895, 1154
HpyF3I	CTNAG	5 cut(s)	465, 802, 1017, 1165, 1351
HpySE526I	ACGT	2 cut(s)	83, 1182
Hsp92I	GRCGYC	1 cut(s)	66
Hsp92II	CATG	3 cut(s)	798, 1069, 1256
HspAI	GCGC	1 cut(s)	66
KasI	GGCGCC	1 cut(s)	65
Kzo9I	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
LmnI	GCTCC	5 cut(s)	129, 191, 381, 1153, 1382
Lsp1109I	GCAGC	3 cut(s)	90, 209, 1157
LweI	GCATC	4 cut(s)	424, 600, 777, 1144
MaeI	CTAG	7 cut(s)	503, 665, 860, 960, 1178, 1301, 1371
MaeII	ACGT	2 cut(s)	83, 1182
MaeIII	GTNAC	4 cut(s)	70, 79, 962, 1260
MalI	GATC	6 cut(s)	137, 182, 507, 910, 996, 1443
MboI	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
MboII	GAAGA	7 cut(s)	79, 190, 358, 409, 653, 775, 1145
MflI	RGATCY	2 cut(s)	505, 908
MhlI	GDGCHC	4 cut(s)	196, 856, 1244, 1315
MluCI	AATT	5 cut(s)	320, 770, 882, 1188, 1208
Mly113I	GGCGCC	1 cut(s)	66
MlyI	GAGTC	6 cut(s)	8, 17, 281, 833, 1243, 1343
MmeI	TCCRAC	2 cut(s)	45, 69
MroXI	GAANNNNTTC	1 cut(s)	1292
MseI	TTAA	2 cut(s)	1053, 1226
MslI	CAYNNNNRTG	1 cut(s)	1390
MspI	CCGG	4 cut(s)	31, 49, 77, 1475
MspR9I	CCNGG	5 cut(s)	31, 50, 933, 1308, 1475
MvaI	CCWGG	2 cut(s)	933, 1308
MvnI	CGCG	1 cut(s)	482
MwoI	GCNNNNNNNGC	6 cut(s)	129, 228, 531, 707, 895, 1154
NarI	GGCGCC	1 cut(s)	66
NciI	CCSGG	3 cut(s)	31, 50, 1475
NdeI	CATATG	2 cut(s)	752, 1267
NdeII	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
NlaIII	CATG	3 cut(s)	798, 1069, 1256
NlaIV	GGNNCC	5 cut(s)	53, 67, 174, 305, 1044
NmeAIII	GCCGAG	1 cut(s)	1011
NmuCI	GTSAC	2 cut(s)	79, 1260
NspV	TTCGAA	3 cut(s)	395, 512, 939
PcsI	WCGNNNNNNNCGW	3 cut(s)	80, 96, 324
PdmI	GAANNNNTTC	1 cut(s)	1292
PfeI	GAWTC	8 cut(s)	186, 216, 329, 367, 549, 668, 980, 1325
PflFI	GACNNNGTC	1 cut(s)	50
PkrI	GCNGC	4 cut(s)	105, 224, 423, 1147
PleI	GAGTC	6 cut(s)	8, 17, 281, 832, 1243, 1343
PluTI	GGCGCC	1 cut(s)	69
PpsI	GAGTC	6 cut(s)	8, 17, 281, 832, 1243, 1343
PpuMI	RGGWCCY	4 cut(s)	52, 151, 1043, 1363
PshAI	GACNNNNGTC	1 cut(s)	1253
PshBI	ATTAAT	1 cut(s)	1053
PsiI	TTATAA	1 cut(s)	1187
Psp124BI	GAGCTC	1 cut(s)	196
Psp5II	RGGWCCY	4 cut(s)	52, 151, 1043, 1363
Psp6I	CCWGG	2 cut(s)	931, 1306
PspGI	CCWGG	2 cut(s)	931, 1306
PspN4I	GGNNCC	5 cut(s)	53, 67, 174, 305, 1044
PspPI	GGNCC	8 cut(s)	4, 33, 52, 151, 173, 1043, 1088, 1363
PspPPI	RGGWCCY	4 cut(s)	52, 151, 1043, 1363
PstI	CTGCAG	1 cut(s)	634
PstNI	CAGNNNCTG	2 cut(s)	638, 1151
PsuI	RGATCY	2 cut(s)	505, 908
PsyI	GACNNNGTC	1 cut(s)	50
RsaI	GTAC	4 cut(s)	39, 637, 1119, 1418
RsaNI	GTAC	4 cut(s)	38, 636, 1118, 1417
RseI	CAYNNNNRTG	1 cut(s)	1390
SacI	GAGCTC	1 cut(s)	196
SalI	GTCGAC	1 cut(s)	200
SaqAI	TTAA	2 cut(s)	1053, 1226
SatI	GCNGC	4 cut(s)	104, 223, 422, 1146
Sau3AI	GATC	6 cut(s)	135, 180, 505, 908, 994, 1441
Sau96I	GGNCC	8 cut(s)	4, 33, 52, 151, 173, 1043, 1088, 1363
SbfI	CCTGCAGG	1 cut(s)	634
SchI	GAGTC	6 cut(s)	8, 17, 281, 833, 1243, 1343
ScrFI	CCNGG	5 cut(s)	31, 50, 933, 1308, 1475
SdaI	CCTGCAGG	1 cut(s)	634
SduI	GDGCHC	4 cut(s)	196, 856, 1244, 1315
SfaNI	GCATC	4 cut(s)	424, 600, 777, 1144
SfcI	CTRYAG	1 cut(s)	630
SfoI	GGCGCC	1 cut(s)	67
SfuI	TTCGAA	3 cut(s)	395, 512, 939
SinI	GGWCC	7 cut(s)	4, 52, 151, 173, 1043, 1088, 1363
SmiMI	CAYNNNNRTG	1 cut(s)	1390
SmlI	CTYRAG	1 cut(s)	578
SmoI	CTYRAG	1 cut(s)	578
SpeI	ACTAGT	1 cut(s)	959
Sse8387I	CCTGCAGG	1 cut(s)	634
Sse9I	AATT	5 cut(s)	320, 770, 882, 1188, 1208
SsiI	CCGC	4 cut(s)	106, 207, 237, 422
SspDI	GGCGCC	1 cut(s)	65
SspMI	CTAG	7 cut(s)	503, 665, 860, 960, 1178, 1301, 1371
SstI	GAGCTC	1 cut(s)	196
StyD4I	CCNGG	5 cut(s)	29, 48, 931, 1306, 1473
StyI	CCWWGG	1 cut(s)	1121
TaaI	ACNGT	1 cut(s)	1092
TaiI	ACGT	2 cut(s)	86, 1185
TaqI	TCGA	9 cut(s)	141, 201, 270, 318, 327, 395, 512, 939, 1024
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	5 cut(s)	320, 770, 882, 1188, 1208
TauI	GCSGC	1 cut(s)	424
TfiI	GAWTC	8 cut(s)	186, 216, 329, 367, 549, 668, 980, 1325
Tru1I	TTAA	2 cut(s)	1053, 1226
Tru9I	TTAA	2 cut(s)	1053, 1226
TscAI	CASTG	6 cut(s)	459, 544, 604, 997, 1107, 1249
TseFI	GTSAC	2 cut(s)	79, 1260
TseI	GCWGC	3 cut(s)	103, 222, 1145
Tsp45I	GTSAC	2 cut(s)	79, 1260
TspDTI	ATGAA	6 cut(s)	313, 426, 723, 993, 1082, 1285
TspGWI	ACGGA	2 cut(s)	128, 921
TspRI	CASTG	6 cut(s)	459, 544, 604, 997, 1107, 1249
Tth111I	GACNNNGTC	1 cut(s)	50
VpaK11BI	GGWCC	7 cut(s)	4, 52, 151, 173, 1043, 1088, 1363
VspI	ATTAAT	1 cut(s)	1053
XagI	CCTNNNNNAGG	1 cut(s)	1125
XapI	RAATTY	2 cut(s)	320, 770
XbaI	TCTAGA	5 cut(s)	502, 664, 859, 1177, 1300
XmiI	GTMKAC	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	1292
XspI	CTAG	7 cut(s)	503, 665, 860, 960, 1178, 1301, 1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.