Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0014558

Physical Location & Seq

Genomic Coordinates Reverse (-)

6345295 .. 6348465

Gene Structure 3171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0073800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCCGATGTGGGGAACCGAGCTCAAGTTCCGGTGATTTCTTTTGCAGCACCTACTATCACACCACCTCTAGTGCAACGCAAGTGGCCATTTTTGATACGAGTGGCAAGCGATGGTGCTGCTCAAATGAAATGTATCGCTGATATAGTTTCTTTGTACGGTTGGAAAAGGGTTATTGCAATATACGAGGATGATGGTTATGGTGGTGATGCTGGGATGCTAGCTCTTTTATCTGAGGCTCTCCAAAATGTTGGTTCAAAGATTGAGCATCATTTGGTTCTCCCACGGGTTTCTTCTCTGTCTGATCCTAATTGGGGTGAACTAGAAGAGATGTTGAAGCTTCCCAGCTTTCAATCTCGGGTGTTCATTGTGCTTCAGTCTTCTTTACCAACGGTAACTAATCTATTCAGGGTGGCAAAGAAGATGGGACTTGTAGGAAGAGACTCGGCTTGGATAATCACAGAGAGTATTACTACTTTACTTGACCCTCAAGTCAATCATGATATGGAAGGTACTCTGGGAATCAAGACCTACTATGCCAATAATACCAGTTCCTATGCCAAGTTCAACAAGGTATTCAAAGAAATGTATCCAGAAAAAGATAACTCCACGCCAGGAATTCATGCTCTTCGAGCATATGATCTGACTAGAATCGTAACACAGGCCATAAGAATGACTAGTAACAGTACCACTAACCTTCAGGTAGTGTTAAATACAGTGCTAGGCAATTACATGGGTTTGAGTGGGAAAATGTTTATTGAAGGACGTGAAGTCTTGTACTCTCCCATATTCAGGATCATTAACATTGTGGAAGGTAACAGTTACAAAGAGTTGAACTTTTGGAGACCAGAGGTTGGGTTCTCAGAAAGCCTTCCACAAGAAACAAGCATATACAGAAGTGATGATGTTGGTACAGTAGTTTGGCCCGGGAAACTAAGTGAAAGAGCCCCAAAAGGCTGGGCAATGCCTACTGCTGATAAGCCAATGAGAATTGGGGTTCCAGGTAGAGCTTCCTTCCCTGCATTTGTAAAGGGTGATCCGAAGAAAAACTCAGCTGAGAAGAGTTATGAAGGTTTCTGCATTCAAATTTTCCAAATGGTGCAAAGTCGTTTGAATTATCCTCTGCCCTTTGAATTCCTGGCCGTTGATGGCCCCTATGATGATCTGGTAGAACTAGTCCATAACAAGACTTTGGATGCTGCTATTGGTGATATTACCATACTAGCAGACCGATTGAAGAAAGTGGAATTCACTCAGCCATATATCGAGTCCGGAGAGAAACTCTATAACAACTTAACTCGAGTAGTTGTTGTAGTGTGGCTGTTTGTTGTATTAATCCTAGGCTCAAGCTACACCGCTAATCTGACTTCCATACTGACCATTCAACGATTGAAACCAACTGTAACAGACATCGAAACGCTACTGAGAACCAACTCAAAAGTTGGCTTGAATAGGGATTCATTTGTCTACAATTACTTGGTGAATGTACTTAAATTCAAACCAGAGAACATCATCAAAATAGGCAGCGAATCCAACTATACTGAGGAATTCAAAATCAAGAGTATATCTGCTGCCTTTCTTGAACTCCCATATGCGAAAGTATTCATGAACCAGTACTGCAAGGGATATACTGCGACCACACCCTTCTACAGATTTGGAGGGCTAGGCTTTGTATTTCAGAAAGGCTCTCCAATTGCCTGGGATTTCAGCAAGGGCATTCTAGAGTTATTGGAGGATGGAGAACTGAAGTCACTTGAAGATACTTGGTTGACACCACATCGTGAGTGTCCAAACAATGCAACTTCAGACACACCAGACAGCTTGAACGTCAAGAATTTTTGGGGCCTATATGTAATATCCGGTGCTACTTCCACCGTTTGCCTTCTATTATCCTTCACTATTTTGCTGAGGAAGTTTCAACAACACCAGGAAGCATACCGAGGCAATGCAAGTGATGAAAGTGTTTGGAACAAGACAGTTAGAATGGCAAGATTCCTATATAATATAGAGCACAATGTTTCTAGTAGAGCTTCAAGTTTTGTTGATGTGCTGGAATTGACTTCTTCCCCATGGGAGCGTGCGATCACTTCCACCCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000147 GO:0000902 GO:0000904 GO:0003674 GO:0003779 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005885 GO:0005938 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0015629 GO:0016043 GO:0016192 GO:0022607 GO:0030029 GO:0030036 GO:0030154 GO:0030479 GO:0030832 GO:0030833 GO:0030838 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0034314 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044085 GO:0044087 GO:0044089 GO:0044396 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051493 GO:0051495 GO:0061645 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0098657 GO:0099568 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04144 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 map04144 map04666 map04810 map05100 map05130 map05131 map05132

Pfam Domains

Protein Families

P34-Arc

Protein Analysis

708

Amino Acids

79.48

Weight (kDa)

6.51

Isoelectric Point (pI)

34.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	6 - 277	5.3e-28	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	356 - 434	2.7e-07	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	361 - 600	1.8e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	435 - 631	3.1e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30825
fragaria_vesca	FvH4_3g13510 FvH4_3g13510
malus_domestica	MD10G1221300.v1.1
prunus_persica	Prupe.4G123300_v2.0.a1 Prupe.4G123300_v2.0.a1
pyrus_communis	pycom10g18690
rosa_chinensis	RchiOBHm_Chr5g0022461 RchiOBHm_Chr6g0246611 RchiOBHm_Chr6g0255501
rosa_laevigata	RLG00000032661
rosa_multiflora	Rmu_sc0005639.1_g000004
rosa_roxburghii	Rroxscaffold_1G00056590
rosa_rugosa	Rorug05G0073700 Rorug05G0073800
rosa_samantha	Rh5AG160700
rosa_wichuraiana	Rw5G014330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
AccB7I	CCANNNNNTGG	1 cut(s)	881
AccI	GTMKAC	1 cut(s)	1494
AccIII	TCCGGA	1 cut(s)	1298
AciI	CCGC	1 cut(s)	1383
AclWI	GGATC	3 cut(s)	326, 830, 1058
AcoI	YGGCCR	2 cut(s)	113, 1167
AcsI	RAATTY	7 cut(s)	645, 1113, 1160, 1274, 1520, 1574, 1861
AcuI	CTGAAG	4 cut(s)	386, 710, 1793, 1815
AdeI	CACNNNGTG	1 cut(s)	1808
AfaI	GTAC	7 cut(s)	185, 541, 715, 806, 940, 1515, 1643
AfiI	CCNNNNNNNGG	4 cut(s)	39, 341, 819, 881
AhdI	GACNNNNNGTC	1 cut(s)	797
AhlI	ACTAGT	2 cut(s)	704, 1201
AjiI	CACGTC	1 cut(s)	794
AjnI	CCWGG	5 cut(s)	640, 1027, 1164, 1724, 1953
Alw21I	GWGCWC	2 cut(s)	52, 2040
Alw26I	GTCTC	2 cut(s)	462, 865
AlwI	GGATC	3 cut(s)	326, 830, 1058
Ama87I	CYCGRG	3 cut(s)	384, 953, 1326
Aor13HI	TCCGGA	1 cut(s)	1298
AoxI	GGCC	6 cut(s)	113, 690, 950, 1167, 1177, 1870
ApeKI	GCWGC	6 cut(s)	20, 74, 146, 1226, 1551, 1598
ApoI	RAATTY	7 cut(s)	645, 1113, 1160, 1274, 1520, 1574, 1861
AseI	ATTAAT	1 cut(s)	1361
Asp700I	GAANNNNTTC	2 cut(s)	897, 1628
AspA2I	CCTAGG	1 cut(s)	1366
AspS9I	GGNCC	3 cut(s)	951, 1178, 1870
AsuC2I	CCSGG	2 cut(s)	954, 955
AsuHPI	GGTGA	6 cut(s)	73, 245, 356, 1073, 1247, 1519
AsuNHI	GCTAGC	1 cut(s)	247
AvaI	CYCGRG	3 cut(s)	384, 953, 1326
AvrII	CCTAGG	1 cut(s)	1366
BaeI	ACNNNNGTAYC	2 cut(s)	930, 963
BalI	TGGCCA	1 cut(s)	115
BanII	GRGCYC	2 cut(s)	52, 976
BbsI	GAAGAC	1 cut(s)	399
Bbv12I	GWGCWC	2 cut(s)	52, 2040
BbvCI	CCTCAGC	1 cut(s)	1934
BbvI	GCAGC	6 cut(s)	32, 86, 133, 1213, 1563, 1585
BccI	CCATC	5 cut(s)	134, 215, 445, 1169, 1757
BceAI	ACGGC	1 cut(s)	1154
BcgI	CGANNNNNNTGC	2 cut(s)	128, 162
BciT130I	CCWGG	5 cut(s)	642, 1029, 1166, 1726, 1955
BciVI	GTATCC	1 cut(s)	627
BcnI	CCSGG	2 cut(s)	954, 955
BcoDI	GTCTC	2 cut(s)	462, 865
BcuI	ACTAGT	2 cut(s)	704, 1201
BfmI	CTRYAG	1 cut(s)	1675
BfuI	GTATCC	1 cut(s)	627
BisI	GCNGC	6 cut(s)	21, 75, 147, 1227, 1552, 1599
BlnI	CCTAGG	1 cut(s)	1366
BlsI	GCNGC	6 cut(s)	22, 76, 148, 1228, 1553, 1600
BmcAI	AGTACT	1 cut(s)	1643
Bme1390I	CCNGG	7 cut(s)	642, 954, 955, 1029, 1166, 1726, 1955
BmeRI	GACNNNNNGTC	1 cut(s)	797
BmeT110I	CYCGRG	3 cut(s)	384, 953, 1326
BmgBI	CACGTC	1 cut(s)	794
BmgT120I	GGNCC	3 cut(s)	951, 1178, 1870
BmiI	GGNNCC	4 cut(s)	44, 1026, 1180, 1871
BmrFI	CCNGG	7 cut(s)	642, 954, 955, 1029, 1166, 1726, 1955
BmsI	GCATC	4 cut(s)	226, 234, 304, 1213
BmtI	GCTAGC	1 cut(s)	251
BpiI	GAAGAC	1 cut(s)	399
BplI	GAGNNNNNCTC	2 cut(s)	1293, 1325
Bpu10I	CCTNAGC	1 cut(s)	1934
BpuEI	CTTGAG	3 cut(s)	36, 501, 1357
BpuMI	CCSGG	2 cut(s)	954, 955
BsaI	GGTCTC	1 cut(s)	865
BsaJI	CCNNGG	6 cut(s)	311, 953, 1366, 1725, 1966, 2096
BsaWI	WCCGGW	3 cut(s)	58, 1298, 1886
Bsc4I	CCNNNNNNNGG	4 cut(s)	39, 341, 819, 881
Bse1I	ACTGG	2 cut(s)	576, 1639
Bse3DI	GCAATG	2 cut(s)	996, 1978
BseAI	TCCGGA	1 cut(s)	1298
BseBI	CCWGG	5 cut(s)	642, 1029, 1166, 1726, 1955
BseDI	CCNNGG	6 cut(s)	311, 953, 1366, 1725, 1966, 2096
BseGI	GGATG	4 cut(s)	223, 249, 1228, 1768
BseLI	CCNNNNNNNGG	4 cut(s)	39, 341, 819, 881
BseMI	GCAATG	2 cut(s)	996, 1978
BseMII	CTCAG	8 cut(s)	252, 903, 1074, 1092, 1295, 1442, 1560, 1925
BseNI	ACTGG	2 cut(s)	576, 1639
BseXI	GCAGC	6 cut(s)	32, 86, 133, 1213, 1563, 1585
BseYI	CCCAGC	3 cut(s)	239, 371, 984
BshFI	GGCC	6 cut(s)	115, 692, 952, 1169, 1179, 1872
BsiHKAI	GWGCWC	2 cut(s)	52, 2040
BsiHKCI	CYCGRG	3 cut(s)	384, 953, 1326
BsiSI	CCGG	4 cut(s)	59, 954, 1299, 1887
BslFI	GGGAC	1 cut(s)	468
BslI	CCNNNNNNNGG	4 cut(s)	39, 341, 819, 881
BsmAI	GTCTC	2 cut(s)	462, 865
BsmFI	GGGAC	1 cut(s)	468
BsmI	GAATGC	2 cut(s)	1107, 1743
BsnI	GGCC	6 cut(s)	115, 692, 952, 1169, 1179, 1872
Bso31I	GGTCTC	1 cut(s)	865
BsoBI	CYCGRG	3 cut(s)	384, 953, 1326
Bsp1286I	GDGCHC	3 cut(s)	52, 976, 2040
Bsp13I	TCCGGA	1 cut(s)	1298
Bsp143I	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
Bsp19I	CCATGG	1 cut(s)	2096
BspACI	CCGC	1 cut(s)	1383
BspANI	GGCC	6 cut(s)	115, 692, 952, 1169, 1179, 1872
BspCNI	CTCAG	8 cut(s)	253, 902, 1075, 1091, 1294, 1443, 1561, 1926
BspEI	TCCGGA	1 cut(s)	1298
BspHI	TCATGA	2 cut(s)	526, 1632
BspLI	GGNNCC	4 cut(s)	44, 1026, 1180, 1871
BspOI	GCTAGC	1 cut(s)	251
BspPI	GGATC	3 cut(s)	326, 830, 1058
BspQI	GCTCTTC	1 cut(s)	660
BspTNI	GGTCTC	1 cut(s)	865
BsrDI	GCAATG	2 cut(s)	996, 1978
BsrI	ACTGG	2 cut(s)	576, 1639
BssECI	CCNNGG	6 cut(s)	311, 953, 1366, 1725, 1966, 2096
BssMI	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
BssT1I	CCWWGG	2 cut(s)	1366, 2096
Bst2UI	CCWGG	5 cut(s)	642, 1029, 1166, 1726, 1955
Bst4CI	ACNGT	9 cut(s)	188, 421, 713, 745, 848, 943, 1429, 1903, 2005
Bst6I	CTCTTC	4 cut(s)	348, 460, 660, 1082
BstC8I	GCNNGC	3 cut(s)	136, 249, 2106
BstDSI	CCRYGG	2 cut(s)	311, 2096
BstF5I	GGATG	4 cut(s)	223, 249, 1228, 1768
BstKTI	GATC	6 cut(s)	334, 670, 825, 1066, 1192, 2112
BstMAI	GTCTC	2 cut(s)	462, 865
BstMBI	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
BstMWI	GCNNNNNNNGC	2 cut(s)	29, 659
BstNI	CCWGG	5 cut(s)	642, 1029, 1166, 1726, 1955
BstSCI	CCNGG	7 cut(s)	640, 952, 953, 1027, 1164, 1724, 1953
BstSFI	CTRYAG	1 cut(s)	1675
BstV1I	GCAGC	6 cut(s)	32, 86, 133, 1213, 1563, 1585
BstV2I	GAAGAC	1 cut(s)	399
BstXI	CCANNNNNNTGG	3 cut(s)	278, 984, 1725
BsuI	GTATCC	1 cut(s)	627
BsuRI	GGCC	6 cut(s)	115, 692, 952, 1169, 1179, 1872
BtgI	CCRYGG	2 cut(s)	311, 2096
BtgZI	GCGATG	1 cut(s)	153
BtrI	CACGTC	1 cut(s)	794
BtsCI	GGATG	4 cut(s)	223, 249, 1228, 1768
BtsIMutI	CAGTG	1 cut(s)	750
Cac8I	GCNNGC	3 cut(s)	136, 249, 2106
CciI	TCATGA	2 cut(s)	526, 1632
Cfr13I	GGNCC	3 cut(s)	951, 1178, 1870
Cfr9I	CCCGGG	1 cut(s)	953
Csp6I	GTAC	7 cut(s)	184, 540, 714, 805, 939, 1514, 1642
CspCI	CAANNNNNGTGG	2 cut(s)	92, 127
CviAII	CATG	5 cut(s)	527, 650, 760, 1633, 2097
CviQI	GTAC	7 cut(s)	184, 540, 714, 805, 939, 1514, 1642
DpnI	GATC	6 cut(s)	333, 669, 824, 1065, 1191, 2111
DpnII	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
DraIII	CACNNNGTG	1 cut(s)	1808
DrdI	GACNNNNNNGTC	1 cut(s)	518
DriI	GACNNNNNGTC	1 cut(s)	797
DseDI	GACNNNNNNGTC	1 cut(s)	518
EaeI	YGGCCR	2 cut(s)	113, 1167
Eam1104I	CTCTTC	4 cut(s)	348, 460, 660, 1082
Eam1105I	GACNNNNNGTC	1 cut(s)	797
EarI	CTCTTC	4 cut(s)	348, 460, 660, 1082
Ecl136II	GAGCTC	1 cut(s)	50
Eco130I	CCWWGG	2 cut(s)	1366, 2096
Eco24I	GRGCYC	2 cut(s)	52, 976
Eco31I	GGTCTC	1 cut(s)	865
Eco53kI	GAGCTC	1 cut(s)	50
Eco57I	CTGAAG	4 cut(s)	386, 710, 1793, 1815
Eco88I	CYCGRG	3 cut(s)	384, 953, 1326
EcoICRI	GAGCTC	1 cut(s)	50
EcoO109I	RGGNCCY	1 cut(s)	1870
EcoRI	GAATTC	4 cut(s)	645, 1160, 1274, 1574
EcoRII	CCWGG	5 cut(s)	640, 1027, 1164, 1724, 1953
EcoT14I	CCWWGG	2 cut(s)	1366, 2096
EcoT38I	GRGCYC	2 cut(s)	52, 976
ErhI	CCWWGG	2 cut(s)	1366, 2096
FaeI	CATG	5 cut(s)	530, 653, 763, 1636, 2100
FaqI	GGGAC	1 cut(s)	468
FatI	CATG	5 cut(s)	526, 649, 759, 1632, 2096
FauNDI	CATATG	2 cut(s)	664, 1618
FblI	GTMKAC	1 cut(s)	1494
Fnu4HI	GCNGC	6 cut(s)	21, 75, 147, 1227, 1552, 1599
FokI	GGATG	4 cut(s)	230, 256, 1235, 1775
FriOI	GRGCYC	2 cut(s)	52, 976
Fsp4HI	GCNGC	6 cut(s)	21, 75, 147, 1227, 1552, 1599
GluI	GCNGC	6 cut(s)	21, 75, 147, 1227, 1552, 1599
GsaI	CCCAGC	3 cut(s)	243, 375, 988
HaeIII	GGCC	6 cut(s)	115, 692, 952, 1169, 1179, 1872
HapII	CCGG	4 cut(s)	59, 954, 1299, 1887
Hin1II	CATG	5 cut(s)	530, 653, 763, 1636, 2100
HincII	GTYRAC	1 cut(s)	1797
HindII	GTYRAC	1 cut(s)	1797
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	7 cut(s)	470, 549, 678, 1295, 1484, 1556, 2019
HpaII	CCGG	4 cut(s)	59, 954, 1299, 1887
HphI	GGTGA	6 cut(s)	73, 245, 356, 1073, 1247, 1519
Hpy166II	GTNNAC	3 cut(s)	347, 1495, 1797
Hpy188I	TCNGA	8 cut(s)	262, 331, 672, 892, 1068, 1392, 1707, 1834
Hpy8I	GTNNAC	3 cut(s)	347, 1495, 1797
HpyCH4III	ACNGT	9 cut(s)	188, 421, 713, 745, 848, 943, 1429, 1903, 2005
HpyCH4IV	ACGT	2 cut(s)	793, 1854
HpyCH4V	TGCA	9 cut(s)	74, 103, 206, 1049, 1107, 1129, 1647, 1826, 1976
HpyF10VI	GCNNNNNNNGC	2 cut(s)	29, 659
HpySE526I	ACGT	2 cut(s)	793, 1854
Hsp92II	CATG	5 cut(s)	530, 653, 763, 1636, 2100
Kpn2I	TCCGGA	1 cut(s)	1298
Kzo9I	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
LguI	GCTCTTC	1 cut(s)	660
LmnI	GCTCC	1 cut(s)	2101
Lsp1109I	GCAGC	6 cut(s)	32, 86, 133, 1213, 1563, 1585
LweI	GCATC	4 cut(s)	226, 234, 304, 1213
MaeII	ACGT	2 cut(s)	793, 1854
MaeIII	GTNAC	7 cut(s)	421, 682, 707, 842, 848, 1429, 1776
MalI	GATC	6 cut(s)	333, 669, 824, 1065, 1191, 2111
MboI	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
MfeI	CAATTG	1 cut(s)	1719
MhlI	GDGCHC	3 cut(s)	52, 976, 2040
MlsI	TGGCCA	1 cut(s)	115
MluNI	TGGCCA	1 cut(s)	115
MlyI	GAGTC	2 cut(s)	464, 1304
MmeI	TCCRAC	2 cut(s)	170, 1584
Mox20I	TGGCCA	1 cut(s)	115
MroI	TCCGGA	1 cut(s)	1298
MroXI	GAANNNNTTC	2 cut(s)	897, 1628
MscI	TGGCCA	1 cut(s)	115
MseI	TTAA	5 cut(s)	737, 828, 1322, 1361, 1518
MslI	CAYNNNNRTG	1 cut(s)	698
Msp20I	TGGCCA	1 cut(s)	115
MspA1I	CMGCKG	1 cut(s)	1082
MspI	CCGG	4 cut(s)	59, 954, 1299, 1887
MspR9I	CCNGG	7 cut(s)	642, 954, 955, 1029, 1166, 1726, 1955
MunI	CAATTG	1 cut(s)	1719
Mva1269I	GAATGC	2 cut(s)	1107, 1743
MvaI	CCWGG	5 cut(s)	642, 1029, 1166, 1726, 1955
MwoI	GCNNNNNNNGC	2 cut(s)	29, 659
NciI	CCSGG	2 cut(s)	954, 955
NcoI	CCATGG	1 cut(s)	2096
NdeI	CATATG	2 cut(s)	664, 1618
NdeII	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
NheI	GCTAGC	1 cut(s)	247
NlaIII	CATG	5 cut(s)	530, 653, 763, 1636, 2100
NlaIV	GGNNCC	4 cut(s)	44, 1026, 1180, 1871
NmeAIII	GCCGAG	1 cut(s)	452
NmuCI	GTSAC	1 cut(s)	1776
PaeR7I	CTCGAG	1 cut(s)	1326
PagI	TCATGA	2 cut(s)	526, 1632
PciSI	GCTCTTC	1 cut(s)	660
PctI	GAATGC	2 cut(s)	1107, 1743
PdmI	GAANNNNTTC	2 cut(s)	897, 1628
PfeI	GAWTC	5 cut(s)	549, 678, 1484, 1556, 2019
PflMI	CCANNNNNTGG	1 cut(s)	881
PkrI	GCNGC	6 cut(s)	22, 76, 148, 1228, 1553, 1600
PleI	GAGTC	2 cut(s)	464, 1303
PpsI	GAGTC	2 cut(s)	464, 1303
PshBI	ATTAAT	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	52
Psp6I	CCWGG	5 cut(s)	640, 1027, 1164, 1724, 1953
PspFI	CCCAGC	3 cut(s)	239, 371, 984
PspGI	CCWGG	5 cut(s)	640, 1027, 1164, 1724, 1953
PspN4I	GGNNCC	4 cut(s)	44, 1026, 1180, 1871
PspPI	GGNCC	3 cut(s)	951, 1178, 1870
PspXI	VCTCGAGB	1 cut(s)	1326
PvuII	CAGCTG	1 cut(s)	1082
RsaI	GTAC	7 cut(s)	185, 541, 715, 806, 940, 1515, 1643
RsaNI	GTAC	7 cut(s)	184, 540, 714, 805, 939, 1514, 1642
RseI	CAYNNNNRTG	1 cut(s)	698
SacI	GAGCTC	1 cut(s)	52
SapI	GCTCTTC	1 cut(s)	660
SaqAI	TTAA	5 cut(s)	737, 828, 1322, 1361, 1518
SatI	GCNGC	6 cut(s)	21, 75, 147, 1227, 1552, 1599
Sau3AI	GATC	6 cut(s)	331, 667, 822, 1063, 1189, 2109
Sau96I	GGNCC	3 cut(s)	951, 1178, 1870
ScaI	AGTACT	1 cut(s)	1643
SchI	GAGTC	2 cut(s)	464, 1304
ScrFI	CCNGG	7 cut(s)	642, 954, 955, 1029, 1166, 1726, 1955
SduI	GDGCHC	3 cut(s)	52, 976, 2040
SfaNI	GCATC	4 cut(s)	226, 234, 304, 1213
SfcI	CTRYAG	1 cut(s)	1675
Sfr274I	CTCGAG	1 cut(s)	1326
SlaI	CTCGAG	1 cut(s)	1326
SmaI	CCCGGG	1 cut(s)	955
SmiMI	CAYNNNNRTG	1 cut(s)	698
SmlI	CTYRAG	4 cut(s)	51, 516, 1326, 1372
SmoI	CTYRAG	4 cut(s)	51, 516, 1326, 1372
SpeI	ACTAGT	2 cut(s)	704, 1201
SsiI	CCGC	1 cut(s)	1383
SstI	GAGCTC	1 cut(s)	52
StyD4I	CCNGG	7 cut(s)	640, 952, 953, 1027, 1164, 1724, 1953
StyI	CCWWGG	2 cut(s)	1366, 2096
TaaI	ACNGT	9 cut(s)	188, 421, 713, 745, 848, 943, 1429, 1903, 2005
TaiI	ACGT	2 cut(s)	796, 1857
TaqI	TCGA	4 cut(s)	658, 1293, 1327, 1440
TaqII	GACCGA	1 cut(s)	1272
TatI	WGTACW	3 cut(s)	804, 1513, 1641
TfiI	GAWTC	5 cut(s)	549, 678, 1484, 1556, 2019
Tru1I	TTAA	5 cut(s)	737, 828, 1322, 1361, 1518
Tru9I	TTAA	5 cut(s)	737, 828, 1322, 1361, 1518
TscAI	CASTG	1 cut(s)	750
TseFI	GTSAC	1 cut(s)	1776
TseI	GCWGC	6 cut(s)	20, 74, 146, 1226, 1551, 1598
Tsp45I	GTSAC	1 cut(s)	1776
TspDTI	ATGAA	8 cut(s)	170, 382, 638, 1110, 1476, 1621, 1649, 1998
TspMI	CCCGGG	1 cut(s)	953
TspRI	CASTG	1 cut(s)	750
Van91I	CCANNNNNTGG	1 cut(s)	881
VspI	ATTAAT	1 cut(s)	1361
XapI	RAATTY	7 cut(s)	645, 1113, 1160, 1274, 1520, 1574, 1861
XbaI	TCTAGA	1 cut(s)	1747
XhoI	CTCGAG	1 cut(s)	1326
XmaI	CCCGGG	1 cut(s)	953
XmaJI	CCTAGG	1 cut(s)	1366
XmiI	GTMKAC	1 cut(s)	1494
XmnI	GAANNNNTTC	2 cut(s)	897, 1628
ZrmI	AGTACT	1 cut(s)	1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.