Rorug05G0230200
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
23987311 .. 23987585
275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0230200.1

Sequence Viewer

Length: 174 bp
ATGTCTTTGACGTTTTCCCCTATTGCGGCTTTTGTCATCTGCAGACGTGTTAGTGCAATAATGTTTGCAAGAAGTGGTTCTTCTATTTACACTGCTGGTGCTGAAGGGATGATTTGTGAAATCGATTCATTGACAGCAAAGGTTTCTGTTTACTCTGGAGTTTGTATATATTGA

Protein Analysis

57

Amino Acids

6.05

Weight (kDa)

7.71

Isoelectric Point (pI)

49.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 26
AcuI CTGAAG 1 cut(s) 123
AfiI CCNNNNNNNGG 1 cut(s) 25
AflIII ACRYGT 1 cut(s) 46
AjiI CACGTC 1 cut(s) 47
Asp700I GAANNNNTTC 1 cut(s) 76
BfmI CTRYAG 1 cut(s) 40
BisI GCNGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 28
BmgBI CACGTC 1 cut(s) 47
Bsa29I ATCGAT 1 cut(s) 123
Bsc4I CCNNNNNNNGG 1 cut(s) 25
BseCI ATCGAT 1 cut(s) 123
BseGI GGATG 1 cut(s) 114
BseLI CCNNNNNNNGG 1 cut(s) 25
BshVI ATCGAT 1 cut(s) 123
BslI CCNNNNNNNGG 1 cut(s) 25
BspACI CCGC 1 cut(s) 26
BspDI ATCGAT 1 cut(s) 123
BspMAI CTGCAG 1 cut(s) 44
BstF5I GGATG 1 cut(s) 114
BstSFI CTRYAG 1 cut(s) 40
Bsu15I ATCGAT 1 cut(s) 123
BsuTUI ATCGAT 1 cut(s) 123
BtrI CACGTC 1 cut(s) 47
BtsCI GGATG 1 cut(s) 114
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 90
ClaI ATCGAT 1 cut(s) 123
CviJI RGCY 1 cut(s) 29
CviKI_1 RGCY 1 cut(s) 29
Eco57I CTGAAG 1 cut(s) 123
FaiI YATR 2 cut(s) 167, 169
FalI AAGNNNNNCTT 2 cut(s) 64, 96
Fnu4HI GCNGC 1 cut(s) 27
FokI GGATG 1 cut(s) 121
Fsp4HI GCNGC 1 cut(s) 27
GluI GCNGC 1 cut(s) 27
HinfI GANTC 1 cut(s) 125
Hpy166II GTNNAC 1 cut(s) 151
Hpy188III TCNNGA 1 cut(s) 156
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 1 cut(s) 98
HpyCH4IV ACGT 2 cut(s) 11, 46
HpyCH4V TGCA 3 cut(s) 42, 56, 68
HpySE526I ACGT 2 cut(s) 11, 46
LpnPI CCDG 2 cut(s) 81, 141
MaeII ACGT 2 cut(s) 11, 46
MboII GAAGA 1 cut(s) 72
MroXI GAANNNNTTC 1 cut(s) 76
PdmI GAANNNNTTC 1 cut(s) 76
PfeI GAWTC 1 cut(s) 125
PkrI GCNGC 1 cut(s) 28
PstI CTGCAG 1 cut(s) 44
SatI GCNGC 1 cut(s) 27
SetI ASST 3 cut(s) 14, 49, 144
SfcI CTRYAG 1 cut(s) 40
SgeI CNNG 4 cut(s) 59, 81, 108, 168
SsiI CCGC 1 cut(s) 26
TaiI ACGT 2 cut(s) 14, 49
TaqI TCGA 1 cut(s) 123
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 1 cut(s) 125
TscAI CASTG 1 cut(s) 97
TspDTI ATGAA 1 cut(s) 117
TspRI CASTG 1 cut(s) 97
XmnI GAANNNNTTC 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.