Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007967

Physical Location & Seq

Genomic Coordinates Reverse (-)

24765011 .. 24767383

Gene Structure 2373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0236000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGGGTGTGTCCGCACTGTCTCCTACTCTTTCATTGTTAATGGAGAACCAAGGGGTAGAGTGATTCCGTCTAGAGGCTTGCGGCAGGGGGATTCAATCTCTCCTTATATGTTTCTTTTATGTGCGGAGGCTCTATCCAGATTGATTATGAAGGCGGAGAGGGAAGACTTGTTGCATGGGGTGGAAATTTGCACTGGTGCTCCCAGTATTAGCCATTTATTTTTCGCAGATGATTCGTTCATTTTCTTCAAGGCAGAGATGGTGGATTGTCTTACACTGAAAGGCATTTTGGAGGAGTATGAACTCGTCTCAGGACAACAAGTTAATTACCAAAAAAGTTGCATCTCCTTTACCAAGAATGTTGATTTTATGTTTCAGGAGGCTTTGGCTGCAATTCTTGGAGTGCAAAGGGTTGAGAAACATGACAAATACCTTGGACTACCGACGGAAATCAGTTATTCAAGGGAAGAAGCTTTTGTCTATTTGAATGAAAAGATTCGCGCTAGGACTCAAGGGTGGAGGGAGAAAACCCTTAGTATTGTTGGTAAGGAAGTGTTGATTAAAGCAGTTGCTCAGGCGATTCCGTCTTATGTTATGGGTTGTTTTGAGCTTCCGAAGCATTTGTGCACTGGGATGCATCAATTAATGGCGCGGTTTTGGTGGGGGGATTCTGAAGAGGGGAAGAAGATACACTGGCTTTCTTGGGACAAGCTTTGTCGTCCGAAATGTGAGGGTGGTTTGGGATTTCGTGACATGCATAGTTTTAACTTGGCGTTATTAGCCAAGCAAGGGTGGAGACTTATACAGAGGTCGGATTCTCTGATTGCTAGACTTTTAAAGGTTAAATATTATCCACATTGTTCCTTCATGGAGGCAGAATTGAAAACTGGAGCTTCATATACGTGGAGGAGTATTATCTCCGGAAGATGTGTATTACAAAAAGGCATTCGGTTCCAAGTGGGTGACGGGAGCAATATTTCAGTTTGGAGTGATCCGTGGTTACCATTGCCTCACTCCTTCAGACCTTTCTCTCCTATTATGAAGGGGACAGAAGATTGGCAAGTTGCGGCCCTGATTGATGGTGAGCGAAAAGAATGGTTAATTGAGGTGCTACGGGAACTGTTTTATGAGGAGGAGGTCCAAAGAATTGCTTCGATACCGCTAAGCCTTCGTCAAGCGGAGGATCGTATTATGTGGCATTTTGACAAGAAGGGTTTTTACAATGTTAGAAGCGGGTATCAGGTGTTTCATAATTCTATTGGCTTAGAAAATAAGGCATCTACATCATCAGATAGAGAGGGAGGAGCATTGCGAGTATACTGGAACAAAGTTTGGGGAGCAAATGTTCCTCCCAAAGTGCGACTTTTTGTTTGGAGACTTCTCAAAGGCATTCTACCTTCCAGGTATGCTTTGAAATTACGGAGAGTTCCTTTGCCAAATTATGCATGTGTGTTTTGTAATCAAGAAGAAGAATCATGCATGCACCTATTTATGAGGTGTAAAGCATTGGGATGGTTTTGGGAGTGTAGCCCACTAAAGTTGGACGCGAAAGGGCATCCAGCAAGCTGCTTAATGGGCTGGGTTTGTGATCTAATGGATGTGTTGAAGTCGGACCAGATTGACTTTTTGTTCATGGCCTTTTGGACCATTTGGACTGAACGTAATAGTCTGGTCTGGAAGGATGGGTACTTCAGGCCCATGCATATGTTACAATGGTGTTGTAGCCAGTTGGAGGAGTATCAAAAGCTGCATGGTAAATCTGGCAAGCAGAAGAAACGACCTCTCACTAAATGGCAGCAACCGCCAAGAGGTCGACTCAAACTTAACGTGGATGGGGCTTTTATAGCTGATTGTGGTCGTGGAGGCATTGGTGTAGTAGTCAGAAATGATGAGGGTATGGGTATTGCGGCTATGGCAAGACCTTTTGTGCATGCGCACTCGGCTCTTAATATGGAAGCGGGGGCGTGCAGAGCTGGTCTTCTTCTTGGTATACACCAAGGTTGGTCGGATATAGATATTGAAAGCGACCCTGCCCTTCTGGTTGCTGCACTCAATTGTGGGGAGAAGAATTTTTCGGAGGTAAGCCGAATTTTAGATGATTGTAAAGATTATATGTGTGCTTTTCAATCAGTTAGAGTTCAGCATATCTACCGAGAAGCAAATGGTGTTGCAGATAGACTTGCACACCTTGCTAGTTTATCTTTGCTTGATGATGTTTGGCTAGATGAGACTCCTGCTATTATTCAGGATGTTCTCTACGAGGATTATTGTCAGTGTAATTCTAGTGCACGAGGTTCAGGTTTTATGTCCCCCTCTTTGCATAATATTAATATAATAAATGGAACCGGGCGTGGGGCTGAGCCTCCCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0065003 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

DIM1

Protein Analysis

790

Amino Acids

89.92

Weight (kDa)

8.24

Isoelectric Point (pI)

43.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	12 - 123	1.9e-07	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	439 - 507	1.5e-14	zinc-binding in reverse transcriptase
RVT_3	PF13456	609 - 730	3.1e-23	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007967)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24730
fragaria_vesca	FvH4_3g25760 FvH4_3g25760 FvH4_3g25760
malus_domestica	MD11G1172800.v1.1
prunus_persica	Prupe.2G099400_v2.0.a1 Prupe.2G099400_v2.0.a1
pyrus_communis	pycom03g10700
rosa_chinensis	RchiOBHm_Chr5g0046911 RchiOBHm_Chr5g0047331
rosa_laevigata	RLG00000034455 RLG00000034491
rosa_multiflora	Rmu_sc0011420.1_g000006 Rmu_sc0012847.1_g000004
rosa_roxburghii	Rroxscaffold_1G00034480
rosa_rugosa	Rorug05G0233000 Rorug05G0233000 Rorug05G0233000 Rorug05G0233100 Rorug05G0236000
rosa_samantha	Rh5AG312100 Rh5BG321100 Rh5DG331700
rosa_wichuraiana	Rw5G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1935
AccI	GTMKAC	3 cut(s)	1317, 1813, 1990
AccII	CGCG	3 cut(s)	501, 652, 1547
AccIII	TCCGGA	1 cut(s)	920
AclWI	GGATC	2 cut(s)	986, 1191
AcsI	RAATTY	3 cut(s)	186, 2068, 2088
AcuI	CTGAAG	3 cut(s)	693, 1003, 1675
AfaI	GTAC	1 cut(s)	1688
AfiI	CCNNNNNNNGG	5 cut(s)	74, 789, 1732, 1808, 2352
AgsI	TTSAA	9 cut(s)	96, 250, 462, 487, 883, 1414, 1606, 2021, 2126
AjnI	CCWGG	1 cut(s)	1400
AjuI	GAANNNNNNNTTGG	2 cut(s)	272, 304
AloI	GAACNNNNNNTCC	2 cut(s)	1329, 1361
AluBI	AGCT	9 cut(s)	473, 610, 712, 893, 1566, 1747, 1847, 1973, 2370
AluI	AGCT	9 cut(s)	473, 610, 712, 893, 1566, 1747, 1847, 1973, 2370
Alw21I	GWGCWC	3 cut(s)	202, 629, 2290
Alw26I	GTCTC	5 cut(s)	25, 313, 790, 1369, 2222
Alw44I	GTGCAC	2 cut(s)	625, 2286
AlwI	GGATC	2 cut(s)	986, 1191
Aor13HI	TCCGGA	1 cut(s)	920
AoxI	GGCC	3 cut(s)	1068, 1635, 1694
ApaLI	GTGCAC	2 cut(s)	625, 2286
ApeKI	GCWGC	5 cut(s)	389, 1566, 1747, 1795, 2045
ApoI	RAATTY	3 cut(s)	186, 2068, 2088
ArsI	GACNNNNNNTTYG	2 cut(s)	1353, 1385
AseI	ATTAAT	2 cut(s)	644, 2328
Asp700I	GAANNNNTTC	2 cut(s)	495, 1150
AspLEI	GCGC	3 cut(s)	503, 652, 1936
AspS9I	GGNCC	5 cut(s)	1069, 1138, 1612, 1644, 1695
AsuC2I	CCSGG	1 cut(s)	2347
AsuHPI	GGTGA	2 cut(s)	974, 1094
AvaII	GGWCC	3 cut(s)	1138, 1612, 1644
BaeGI	GKGCMC	2 cut(s)	629, 2290
BarI	GAAGNNNNNNTAC	4 cut(s)	1202, 1234, 1670, 1702
BauI	CACGAG	1 cut(s)	2289
BbsI	GAAGAC	2 cut(s)	171, 1970
Bbv12I	GWGCWC	3 cut(s)	202, 629, 2290
BbvI	GCAGC	5 cut(s)	376, 1553, 1734, 1807, 2032
BccI	CCATC	5 cut(s)	253, 1073, 1506, 1676, 1826
BcgI	CGANNNNNNTGC	2 cut(s)	216, 250
BciT130I	CCWGG	1 cut(s)	1402
BcnI	CCSGG	1 cut(s)	2347
BcoDI	GTCTC	5 cut(s)	25, 313, 790, 1369, 2222
BfaI	CTAG	7 cut(s)	72, 504, 828, 2193, 2222, 2283, 2371
BisI	GCNGC	8 cut(s)	83, 390, 1068, 1567, 1748, 1796, 1908, 2046
BlpI	GCTNAGC	2 cut(s)	1163, 2358
BlsI	GCNGC	8 cut(s)	84, 391, 1069, 1568, 1749, 1797, 1909, 2047
Bme1390I	CCNGG	2 cut(s)	1402, 2347
Bme18I	GGWCC	3 cut(s)	1138, 1612, 1644
BmgT120I	GGNCC	5 cut(s)	1069, 1138, 1612, 1644, 1695
BmiI	GGNNCC	2 cut(s)	953, 2344
BmrFI	CCNGG	2 cut(s)	1402, 2347
BmrI	ACTGGG	2 cut(s)	198, 639
BmsI	GCATC	5 cut(s)	351, 624, 646, 1286, 1564
BmuI	ACTGGG	2 cut(s)	198, 639
BpiI	GAAGAC	2 cut(s)	171, 1970
BplI	GAGNNNNNCTC	2 cut(s)	1800, 1832
BpmI	CTGGAG	1 cut(s)	909
Bpu10I	CCTNAGC	1 cut(s)	573
Bpu1102I	GCTNAGC	2 cut(s)	1163, 2358
BpuEI	CTTGAG	1 cut(s)	495
BpuMI	CCSGG	1 cut(s)	2347
BsaAI	YACGTR	1 cut(s)	903
BsaJI	CCNNGG	4 cut(s)	50, 433, 995, 1996
BsaWI	WCCGGW	1 cut(s)	920
BsaXI	ACNNNNNCTCC	4 cut(s)	184, 214, 1329, 1359
Bsc4I	CCNNNNNNNGG	5 cut(s)	74, 789, 1732, 1808, 2352
Bse1I	ACTGG	7 cut(s)	199, 204, 634, 698, 892, 1325, 1726
Bse3DI	GCAATG	2 cut(s)	1004, 1307
BseAI	TCCGGA	1 cut(s)	920
BseBI	CCWGG	1 cut(s)	1402
BseDI	CCNNGG	4 cut(s)	50, 433, 995, 1996
BseGI	GGATG	7 cut(s)	639, 1517, 1555, 1603, 1687, 1837, 2254
BseLI	CCNNNNNNNGG	5 cut(s)	74, 789, 1732, 1808, 2352
BseMI	GCAATG	2 cut(s)	1004, 1307
BseMII	CTCAG	3 cut(s)	324, 587, 2349
BseNI	ACTGG	7 cut(s)	199, 204, 634, 698, 892, 1325, 1726
BseRI	GAGGAG	6 cut(s)	308, 922, 1145, 1148, 1317, 1748
BseSI	GKGCMC	2 cut(s)	629, 2290
BseXI	GCAGC	5 cut(s)	376, 1553, 1734, 1807, 2032
BseYI	CCCAGC	2 cut(s)	1578, 2366
BsgI	GTGCAG	2 cut(s)	1987, 2031
Bsh1236I	CGCG	3 cut(s)	501, 652, 1547
BshFI	GGCC	3 cut(s)	1070, 1637, 1696
BsiHKAI	GWGCWC	3 cut(s)	202, 629, 2290
BsiSI	CCGG	2 cut(s)	921, 2346
BslFI	GGGAC	3 cut(s)	719, 1060, 2293
BslI	CCNNNNNNNGG	5 cut(s)	74, 789, 1732, 1808, 2352
BsmAI	GTCTC	5 cut(s)	25, 313, 790, 1369, 2222
BsmBI	CGTCTC	1 cut(s)	313
BsmFI	GGGAC	3 cut(s)	719, 1060, 2293
BsmI	GAATGC	2 cut(s)	945, 1389
BsnI	GGCC	3 cut(s)	1070, 1637, 1696
Bsp1286I	GDGCHC	3 cut(s)	202, 629, 2290
Bsp13I	TCCGGA	1 cut(s)	920
Bsp143I	GATC	3 cut(s)	991, 1183, 1588
Bsp1720I	GCTNAGC	2 cut(s)	1163, 2358
BspANI	GGCC	3 cut(s)	1070, 1637, 1696
BspCNI	CTCAG	3 cut(s)	323, 586, 2350
BspEI	TCCGGA	1 cut(s)	920
BspFNI	CGCG	3 cut(s)	501, 652, 1547
BspLI	GGNNCC	2 cut(s)	953, 2344
BspPI	GGATC	2 cut(s)	986, 1191
BsrDI	GCAATG	2 cut(s)	1004, 1307
BsrI	ACTGG	7 cut(s)	199, 204, 634, 698, 892, 1325, 1726
BssECI	CCNNGG	4 cut(s)	50, 433, 995, 1996
BssMI	GATC	3 cut(s)	991, 1183, 1588
BssNAI	GTATAC	2 cut(s)	1318, 1991
BssSI	CACGAG	1 cut(s)	2289
BssT1I	CCWWGG	3 cut(s)	50, 433, 1996
Bst1107I	GTATAC	2 cut(s)	1318, 1991
Bst2BI	CACGAG	1 cut(s)	2289
Bst2UI	CCWGG	1 cut(s)	1402
Bst4CI	ACNGT	2 cut(s)	19, 1122
Bst6I	CTCTTC	1 cut(s)	669
BstAPI	GCANNNNNTGC	1 cut(s)	2189
BstBAI	YACGTR	1 cut(s)	903
BstC8I	GCNNGC	6 cut(s)	80, 1481, 1564, 1766, 1932, 1966
BstDEI	CTNAG	6 cut(s)	310, 533, 573, 1163, 1264, 2358
BstDSI	CCRYGG	1 cut(s)	995
BstEII	GGTNACC	1 cut(s)	999
BstF5I	GGATG	7 cut(s)	639, 1517, 1555, 1603, 1687, 1837, 2254
BstFNI	CGCG	3 cut(s)	501, 652, 1547
BstHHI	GCGC	3 cut(s)	503, 652, 1936
BstKTI	GATC	3 cut(s)	994, 1186, 1591
BstMAI	GTCTC	5 cut(s)	25, 313, 790, 1369, 2222
BstMBI	GATC	3 cut(s)	991, 1183, 1588
BstNI	CCWGG	1 cut(s)	1402
BstNSI	RCATGY	4 cut(s)	757, 1449, 1483, 1934
BstPI	GGTNACC	1 cut(s)	999
BstSCI	CCNGG	2 cut(s)	1400, 2345
BstSLI	GKGCMC	2 cut(s)	629, 2290
BstUI	CGCG	3 cut(s)	501, 652, 1547
BstV1I	GCAGC	5 cut(s)	376, 1553, 1734, 1807, 2032
BstV2I	GAAGAC	2 cut(s)	171, 1970
BstZ17I	GTATAC	2 cut(s)	1318, 1991
BsuRI	GGCC	3 cut(s)	1070, 1637, 1696
BtgI	CCRYGG	1 cut(s)	995
BtsCI	GGATG	7 cut(s)	639, 1517, 1555, 1603, 1687, 1837, 2254
BtsIMutI	CAGTG	6 cut(s)	15, 192, 275, 627, 691, 2279
Cac8I	GCNNGC	6 cut(s)	80, 1481, 1564, 1766, 1932, 1966
CfoI	GCGC	3 cut(s)	503, 652, 1936
Cfr13I	GGNCC	5 cut(s)	1069, 1138, 1612, 1644, 1695
CseI	GACGC	1 cut(s)	1553
Csp6I	GTAC	1 cut(s)	1687
CspCI	CAANNNNNGTGG	2 cut(s)	1521, 1556
CviQI	GTAC	1 cut(s)	1687
DdeI	CTNAG	6 cut(s)	310, 533, 573, 1163, 1264, 2358
DpnI	GATC	3 cut(s)	993, 1185, 1590
DpnII	GATC	3 cut(s)	991, 1183, 1588
DraI	TTTAAA	1 cut(s)	837
Eam1104I	CTCTTC	1 cut(s)	669
EarI	CTCTTC	1 cut(s)	669
EciI	GGCGGA	1 cut(s)	170
Eco130I	CCWWGG	3 cut(s)	50, 433, 1996
Eco47I	GGWCC	3 cut(s)	1138, 1612, 1644
Eco57I	CTGAAG	3 cut(s)	693, 1003, 1675
Eco91I	GGTNACC	1 cut(s)	999
EcoO65I	GGTNACC	1 cut(s)	999
EcoRII	CCWGG	1 cut(s)	1400
EcoT14I	CCWWGG	3 cut(s)	50, 433, 1996
EcoT22I	ATGCAT	5 cut(s)	639, 759, 1447, 1481, 1704
ErhI	CCWWGG	3 cut(s)	50, 433, 1996
Esp3I	CGTCTC	1 cut(s)	313
FalI	AAGNNNNNCTT	4 cut(s)	1135, 1167, 1347, 1379
FaqI	GGGAC	3 cut(s)	719, 1060, 2293
FauI	CCCGC	2 cut(s)	1226, 1951
FauNDI	CATATG	1 cut(s)	1704
FblI	GTMKAC	3 cut(s)	1317, 1813, 1990
Fnu4HI	GCNGC	8 cut(s)	83, 390, 1068, 1567, 1748, 1796, 1908, 2046
FokI	GGATG	7 cut(s)	646, 1524, 1542, 1610, 1694, 1844, 2261
Fsp4HI	GCNGC	8 cut(s)	83, 390, 1068, 1567, 1748, 1796, 1908, 2046
FspAI	RTGCGCAY	1 cut(s)	1935
FspBI	CTAG	7 cut(s)	72, 504, 828, 2193, 2222, 2283, 2371
FspI	TGCGCA	1 cut(s)	1935
GlaI	GCGC	3 cut(s)	502, 651, 1935
GluI	GCNGC	8 cut(s)	83, 390, 1068, 1567, 1748, 1796, 1908, 2046
GsaI	CCCAGC	2 cut(s)	1582, 2370
GsuI	CTGGAG	1 cut(s)	909
HaeIII	GGCC	3 cut(s)	1070, 1637, 1696
HapII	CCGG	2 cut(s)	921, 2346
HgaI	GACGC	1 cut(s)	1553
HhaI	GCGC	3 cut(s)	503, 652, 1936
Hin6I	GCGC	3 cut(s)	501, 650, 1934
HinP1I	GCGC	3 cut(s)	501, 650, 1934
HincII	GTYRAC	1 cut(s)	1814
HindII	GTYRAC	1 cut(s)	1814
HindIII	AAGCTT	2 cut(s)	471, 710
HpaII	CCGG	2 cut(s)	921, 2346
HphI	GGTGA	2 cut(s)	974, 1094
Hpy166II	GTNNAC	5 cut(s)	627, 1318, 1814, 1991, 2288
Hpy188III	TCNNGA	9 cut(s)	72, 138, 312, 377, 749, 921, 1463, 1675, 2246
Hpy8I	GTNNAC	5 cut(s)	627, 1318, 1814, 1991, 2288
Hpy99I	CGWCG	1 cut(s)	448
HpyAV	CCTTC	9 cut(s)	145, 874, 1027, 1036, 1178, 1204, 1407, 1672, 2045
HpyCH4III	ACNGT	2 cut(s)	19, 1122
HpyCH4IV	ACGT	3 cut(s)	902, 1660, 1827
HpyF3I	CTNAG	6 cut(s)	310, 533, 573, 1163, 1264, 2358
HpySE526I	ACGT	3 cut(s)	902, 1660, 1827
HspAI	GCGC	3 cut(s)	501, 650, 1934
Kpn2I	TCCGGA	1 cut(s)	920
Kzo9I	GATC	3 cut(s)	991, 1183, 1588
LmnI	GCTCC	5 cut(s)	205, 890, 969, 1304, 1337
Lsp1109I	GCAGC	5 cut(s)	376, 1553, 1734, 1807, 2032
LweI	GCATC	5 cut(s)	351, 624, 646, 1286, 1564
MaeI	CTAG	7 cut(s)	72, 504, 828, 2193, 2222, 2283, 2371
MaeII	ACGT	3 cut(s)	902, 1660, 1827
MaeIII	GTNAC	4 cut(s)	749, 962, 999, 1707
MalI	GATC	3 cut(s)	993, 1185, 1590
MboI	GATC	3 cut(s)	991, 1183, 1588
MfeI	CAATTG	1 cut(s)	2053
MhlI	GDGCHC	3 cut(s)	202, 629, 2290
MlyI	GAGTC	3 cut(s)	502, 1809, 2224
MmeI	TCCRAC	5 cut(s)	792, 1521, 1590, 1710, 1986
Mph1103I	ATGCAT	5 cut(s)	639, 759, 1447, 1481, 1704
MroI	TCCGGA	1 cut(s)	920
MroXI	GAANNNNTTC	2 cut(s)	495, 1150
MslI	CAYNNNNRTG	4 cut(s)	632, 901, 1510, 1703
MspI	CCGG	2 cut(s)	921, 2346
MspR9I	CCNGG	2 cut(s)	1402, 2347
MunI	CAATTG	1 cut(s)	2053
Mva1269I	GAATGC	2 cut(s)	945, 1389
MvaI	CCWGG	1 cut(s)	1402
MvnI	CGCG	3 cut(s)	501, 652, 1547
NciI	CCSGG	1 cut(s)	2347
NdeI	CATATG	1 cut(s)	1704
NdeII	GATC	3 cut(s)	991, 1183, 1588
NlaIV	GGNNCC	2 cut(s)	953, 2344
NmeAIII	GCCGAG	1 cut(s)	1919
NmuCI	GTSAC	2 cut(s)	749, 962
NsbI	TGCGCA	1 cut(s)	1935
NsiI	ATGCAT	5 cut(s)	639, 759, 1447, 1481, 1704
NspI	RCATGY	4 cut(s)	757, 1449, 1483, 1934
PaeI	GCATGC	2 cut(s)	1483, 1934
PctI	GAATGC	2 cut(s)	945, 1389
PdmI	GAANNNNTTC	2 cut(s)	495, 1150
PfeI	GAWTC	8 cut(s)	64, 92, 233, 496, 580, 668, 815, 1472
PkrI	GCNGC	8 cut(s)	84, 391, 1069, 1568, 1749, 1797, 1909, 2047
PleI	GAGTC	3 cut(s)	502, 1809, 2224
PpsI	GAGTC	3 cut(s)	502, 1809, 2224
Ppu21I	YACGTR	1 cut(s)	903
PshBI	ATTAAT	2 cut(s)	644, 2328
Psp6I	CCWGG	1 cut(s)	1400
PspEI	GGTNACC	1 cut(s)	999
PspFI	CCCAGC	2 cut(s)	1578, 2366
PspGI	CCWGG	1 cut(s)	1400
PspN4I	GGNNCC	2 cut(s)	953, 2344
PspPI	GGNCC	5 cut(s)	1069, 1138, 1612, 1644, 1695
RsaI	GTAC	1 cut(s)	1688
RsaNI	GTAC	1 cut(s)	1687
RseI	CAYNNNNRTG	4 cut(s)	632, 901, 1510, 1703
SalI	GTCGAC	1 cut(s)	1812
SatI	GCNGC	8 cut(s)	83, 390, 1068, 1567, 1748, 1796, 1908, 2046
Sau3AI	GATC	3 cut(s)	991, 1183, 1588
Sau96I	GGNCC	5 cut(s)	1069, 1138, 1612, 1644, 1695
SchI	GAGTC	3 cut(s)	502, 1809, 2224
ScrFI	CCNGG	2 cut(s)	1402, 2347
SduI	GDGCHC	3 cut(s)	202, 629, 2290
SfaNI	GCATC	5 cut(s)	351, 624, 646, 1286, 1564
SinI	GGWCC	3 cut(s)	1138, 1612, 1644
SmiMI	CAYNNNNRTG	4 cut(s)	632, 901, 1510, 1703
SmlI	CTYRAG	1 cut(s)	510
SmoI	CTYRAG	1 cut(s)	510
SphI	GCATGC	2 cut(s)	1483, 1934
SspI	AATATT	3 cut(s)	848, 976, 2326
SspMI	CTAG	7 cut(s)	72, 504, 828, 2193, 2222, 2283, 2371
StyD4I	CCNGG	2 cut(s)	1400, 2345
StyI	CCWWGG	3 cut(s)	50, 433, 1996
TaaI	ACNGT	2 cut(s)	19, 1122
TaiI	ACGT	3 cut(s)	905, 1663, 1830
TaqI	TCGA	2 cut(s)	1154, 1813
TauI	GCSGC	3 cut(s)	85, 1070, 1910
TfiI	GAWTC	8 cut(s)	64, 92, 233, 496, 580, 668, 815, 1472
TscAI	CASTG	6 cut(s)	22, 199, 282, 634, 698, 2279
TseFI	GTSAC	2 cut(s)	749, 962
TseI	GCWGC	5 cut(s)	389, 1566, 1747, 1795, 2045
Tsp45I	GTSAC	2 cut(s)	749, 962
TspGWI	ACGGA	5 cut(s)	57, 461, 573, 984, 1435
TspRI	CASTG	6 cut(s)	22, 199, 282, 634, 698, 2279
VneI	GTGCAC	2 cut(s)	625, 2286
VpaK11BI	GGWCC	3 cut(s)	1138, 1612, 1644
VspI	ATTAAT	2 cut(s)	644, 2328
XapI	RAATTY	3 cut(s)	186, 2068, 2088
XbaI	TCTAGA	1 cut(s)	71
XceI	RCATGY	4 cut(s)	757, 1449, 1483, 1934
XmiI	GTMKAC	3 cut(s)	1317, 1813, 1990
XmnI	GAANNNNTTC	2 cut(s)	495, 1150
XspI	CTAG	7 cut(s)	72, 504, 828, 2193, 2222, 2283, 2371
Zsp2I	ATGCAT	5 cut(s)	639, 759, 1447, 1481, 1704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.