Rorug05G0295200

Phospholipid diacylglycerol acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
34045620 .. 34046871
1252 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0295200.1

Sequence Viewer

Length: 225 bp
ATGGCATTCTCAAAGACTATTCTTCTCGTTGCCCTTGTCTTTGCTGTTCTCCTCATCTCCTCTGAGGTCTCAGCTCATGAAAATTCTGACCACTTCCACGGCAACGATCATGGACATGGAGGACATGGACATGGAGGACATGGAGGACACGGAGGACATGTTGGCCATGGAGGCCGTGGAGGGCACGGAGGGCATGGACCTGGTGCTCATGAAACTGAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

7.4

Weight (kDa)

6.36

Isoelectric Point (pI)

11.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011775)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 1 cut(s) 82
AflIII ACRYGT 1 cut(s) 157
AjnI CCWGG 1 cut(s) 199
AluBI AGCT 1 cut(s) 74
AluI AGCT 1 cut(s) 74
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 73
AoxI GGCC 2 cut(s) 163, 172
ApoI RAATTY 1 cut(s) 82
AspS9I GGNCC 1 cut(s) 197
AvaII GGWCC 1 cut(s) 197
BaeGI GKGCMC 1 cut(s) 186
BalI TGGCCA 1 cut(s) 165
Bbv12I GWGCWC 1 cut(s) 208
BceAI ACGGC 2 cut(s) 115, 159
BciT130I CCWGG 1 cut(s) 201
BcoDI GTCTC 1 cut(s) 73
BglI GCCNNNNNGGC 1 cut(s) 171
Bme1390I CCNGG 1 cut(s) 201
Bme18I GGWCC 1 cut(s) 197
BmgT120I GGNCC 1 cut(s) 197
BmrFI CCNGG 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 3 cut(s) 97, 166, 175
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
BseBI CCWGG 1 cut(s) 201
BseDI CCNNGG 3 cut(s) 97, 166, 175
BseMII CTCAG 3 cut(s) 54, 84, 207
BseRI GAGGAG 2 cut(s) 41, 49
BseSI GKGCMC 1 cut(s) 186
BshFI GGCC 2 cut(s) 165, 174
BsiHKAI GWGCWC 1 cut(s) 208
BsmAI GTCTC 1 cut(s) 73
BsmI GAATGC 1 cut(s) 5
BsnI GGCC 2 cut(s) 165, 174
Bso31I GGTCTC 1 cut(s) 73
Bsp1286I GDGCHC 2 cut(s) 186, 208
Bsp143I GATC 1 cut(s) 106
Bsp19I CCATGG 1 cut(s) 166
BspANI GGCC 2 cut(s) 165, 174
BspCNI CTCAG 3 cut(s) 55, 83, 208
BspHI TCATGA 2 cut(s) 76, 208
BspTNI GGTCTC 1 cut(s) 73
BssECI CCNNGG 3 cut(s) 97, 166, 175
BssMI GATC 1 cut(s) 106
BssT1I CCWWGG 1 cut(s) 166
Bst2UI CCWGG 1 cut(s) 201
BstDEI CTNAG 3 cut(s) 63, 70, 216
BstDSI CCRYGG 3 cut(s) 97, 166, 175
BstKTI GATC 1 cut(s) 109
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 1 cut(s) 106
BstMWI GCNNNNNNNGC 2 cut(s) 171, 190
BstNI CCWGG 1 cut(s) 201
BstNSI RCATGY 1 cut(s) 161
BstSCI CCNGG 1 cut(s) 199
BstSLI GKGCMC 1 cut(s) 186
BsuRI GGCC 2 cut(s) 165, 174
BtgI CCRYGG 3 cut(s) 97, 166, 175
CciI TCATGA 2 cut(s) 76, 208
Cfr13I GGNCC 1 cut(s) 197
CsiI ACCWGGT 1 cut(s) 199
CviJI RGCY 3 cut(s) 74, 165, 174
CviKI_1 RGCY 3 cut(s) 74, 165, 174
DdeI CTNAG 3 cut(s) 63, 70, 216
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
EaeI YGGCCR 1 cut(s) 163
Eco130I CCWWGG 1 cut(s) 166
Eco31I GGTCTC 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 199
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
HaeIII GGCC 2 cut(s) 165, 174
Hpy188I TCNGA 2 cut(s) 64, 88
Hpy188III TCNNGA 2 cut(s) 77, 209
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 190
HpyF3I CTNAG 3 cut(s) 63, 70, 216
Kzo9I GATC 1 cut(s) 106
LpnPI CCDG 2 cut(s) 186, 213
MabI ACCWGGT 1 cut(s) 199
MalI GATC 1 cut(s) 108
MboI GATC 1 cut(s) 106
MboII GAAGA 1 cut(s) 14
MhlI GDGCHC 2 cut(s) 186, 208
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 2 cut(s) 82, 220
MluNI TGGCCA 1 cut(s) 165
Mox20I TGGCCA 1 cut(s) 165
MscI TGGCCA 1 cut(s) 165
MslI CAYNNNNRTG 2 cut(s) 114, 129
Msp20I TGGCCA 1 cut(s) 165
MspR9I CCNGG 1 cut(s) 201
Mva1269I GAATGC 1 cut(s) 5
MvaI CCWGG 1 cut(s) 201
MwoI GCNNNNNNNGC 2 cut(s) 171, 190
NcoI CCATGG 1 cut(s) 166
NdeII GATC 1 cut(s) 106
NspI RCATGY 1 cut(s) 161
PagI TCATGA 2 cut(s) 76, 208
PciI ACATGT 1 cut(s) 157
PctI GAATGC 1 cut(s) 5
PscI ACATGT 1 cut(s) 157
Psp6I CCWGG 1 cut(s) 199
PspGI CCWGG 1 cut(s) 199
PspPI GGNCC 1 cut(s) 197
RseI CAYNNNNRTG 2 cut(s) 114, 129
Sau3AI GATC 1 cut(s) 106
Sau96I GGNCC 1 cut(s) 197
ScrFI CCNGG 1 cut(s) 201
SduI GDGCHC 2 cut(s) 186, 208
SetI ASST 3 cut(s) 69, 76, 202
SexAI ACCWGGT 1 cut(s) 199
SfiI GGCCNNNNNGGCC 1 cut(s) 171
SinI GGWCC 1 cut(s) 197
SmiMI CAYNNNNRTG 2 cut(s) 114, 129
Sse9I AATT 2 cut(s) 82, 220
StyD4I CCNGG 1 cut(s) 199
StyI CCWWGG 1 cut(s) 166
TasI AATT 2 cut(s) 82, 220
TspDTI ATGAA 2 cut(s) 93, 225
TspGWI ACGGA 2 cut(s) 165, 201
VpaK11BI GGWCC 1 cut(s) 197
XapI RAATTY 1 cut(s) 82
XceI RCATGY 1 cut(s) 161
XcmI CCANNNNNNNNNTGG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.