Rorug05G0359400

UDP-glucuronic acid decarboxylase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
45659762 .. 45659968
207 bp
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UTR
Exon/CDS
Intron
Rorug05G0359400.1

Sequence Viewer

Length: 207 bp
ATGCTACTACAGTTGTCGAGCACGAGACAACTGAAGAGGGCACCAAGTATTGGTATTAGAACTCATGGAGCAATAAATGGGCTGAAAATGGCTATTTCAGAATTTTTAGAGATAATGGTAGGCTTGAAGGTGAATGTGACATTAATATGGATGGTGATTATCCAACAAACATATAGAAATAGGCAATATATAGCCCTTGAAATATGA

Protein Analysis

68

Amino Acids

7.78

Weight (kDa)

10.52

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 40
AccB7I CCANNNNNTGG 1 cut(s) 50
AcsI RAATTY 1 cut(s) 101
AcuI CTGAAG 1 cut(s) 53
AfiI CCNNNNNNNGG 1 cut(s) 50
AgsI TTSAA 2 cut(s) 127, 200
Alw21I GWGCWC 1 cut(s) 23
Alw26I GTCTC 1 cut(s) 19
ApoI RAATTY 1 cut(s) 101
AseI ATTAAT 1 cut(s) 143
AsuHPI GGTGA 2 cut(s) 142, 166
BaeGI GKGCMC 1 cut(s) 43
BanI GGYRCC 1 cut(s) 40
BauI CACGAG 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 23
BccI CCATC 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 19
BfmI CTRYAG 1 cut(s) 8
BmiI GGNNCC 1 cut(s) 42
Bsc4I CCNNNNNNNGG 1 cut(s) 50
BseGI GGATG 1 cut(s) 156
BseLI CCNNNNNNNGG 1 cut(s) 50
BseSI GKGCMC 1 cut(s) 43
BshNI GGYRCC 1 cut(s) 40
BsiHKAI GWGCWC 1 cut(s) 23
BslI CCNNNNNNNGG 1 cut(s) 50
BsmAI GTCTC 1 cut(s) 19
Bsp1286I GDGCHC 2 cut(s) 23, 43
BspLI GGNNCC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 40
BssSI CACGAG 1 cut(s) 22
Bst2BI CACGAG 1 cut(s) 22
Bst4CI ACNGT 1 cut(s) 12
Bst6I CTCTTC 1 cut(s) 29
BstF5I GGATG 1 cut(s) 156
BstMAI GTCTC 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 8
BstSLI GKGCMC 1 cut(s) 43
BtsCI GGATG 1 cut(s) 156
CviAII CATG 1 cut(s) 65
CviJI RGCY 4 cut(s) 82, 92, 123, 194
CviKI_1 RGCY 4 cut(s) 82, 92, 123, 194
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Eco57I CTGAAG 1 cut(s) 53
FaeI CATG 1 cut(s) 68
FaiI YATR 7 cut(s) 66, 148, 172, 174, 189, 191, 205
FatI CATG 1 cut(s) 64
FokI GGATG 1 cut(s) 163
Hin1II CATG 1 cut(s) 68
HphI GGTGA 2 cut(s) 142, 166
Hpy188I TCNGA 1 cut(s) 100
HpyAV CCTTC 1 cut(s) 121
HpyCH4III ACNGT 1 cut(s) 12
Hsp92II CATG 1 cut(s) 68
LmnI GCTCC 1 cut(s) 68
MaeIII GTNAC 1 cut(s) 136
MboII GAAGA 1 cut(s) 46
MhlI GDGCHC 2 cut(s) 23, 43
MluCI AATT 1 cut(s) 101
MmeI TCCRAC 1 cut(s) 187
MnlI CCTC 1 cut(s) 30
MseI TTAA 1 cut(s) 143
MslI CAYNNNNRTG 1 cut(s) 145
NlaIII CATG 1 cut(s) 68
NlaIV GGNNCC 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 136
PflMI CCANNNNNTGG 1 cut(s) 50
PshBI ATTAAT 1 cut(s) 143
PspN4I GGNNCC 1 cut(s) 42
RseI CAYNNNNRTG 1 cut(s) 145
SaqAI TTAA 1 cut(s) 143
SduI GDGCHC 2 cut(s) 23, 43
SetI ASST 1 cut(s) 132
SfcI CTRYAG 1 cut(s) 8
SgeI CNNG 6 cut(s) 30, 34, 36, 57, 77, 136
SmiMI CAYNNNNRTG 1 cut(s) 145
Sse9I AATT 1 cut(s) 101
TaaI ACNGT 1 cut(s) 12
TaqI TCGA 1 cut(s) 17
TasI AATT 1 cut(s) 101
Tru1I TTAA 1 cut(s) 143
Tru9I TTAA 1 cut(s) 143
TseFI GTSAC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 136
Van91I CCANNNNNTGG 1 cut(s) 50
VspI ATTAAT 1 cut(s) 143
XapI RAATTY 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.