Rorug05G0408300

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
56359818 .. 56360090
273 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0408300.1

Sequence Viewer

Length: 273 bp
ATGGTGAAGTGTGGAGTTGTTTTAGCAGCTATGGTTTGTGGGGTTTTGGTGTATGGGTCTAGGAGAGCTTTTGCTGTGGAGGGTGCGGTCAATGCAAGTTATGGGGTTGTTGACAAGTGCATATTGATGTTCAGAAATGCTTGGCCGAAGACGCTGCTGGTTCTTCAAGTTTTTAAAGAGCAGGGTTTGATTTTGGCGGCGCTTTTGGGTCTCTCGGCTTTTTTCTCAATGGCAGAGACTTCGATTACCACGCTATGGCCTTGGAAGGTATGA

Protein Analysis

90

Amino Acids

9.77

Weight (kDa)

9.26

Isoelectric Point (pI)

23.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 255
AciI CCGC 2 cut(s) 86, 197
AcoI YGGCCR 1 cut(s) 143
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 1 cut(s) 167
AluBI AGCT 2 cut(s) 29, 68
AluI AGCT 2 cut(s) 29, 68
Alw26I GTCTC 2 cut(s) 215, 230
AoxI GGCC 2 cut(s) 143, 257
ApeKI GCWGC 2 cut(s) 26, 154
AspLEI GCGC 1 cut(s) 202
AsuHPI GGTGA 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 155
BbvI GCAGC 2 cut(s) 38, 141
BcgI CGANNNNNNTGC 4 cut(s) 136, 170, 222, 256
BcoDI GTCTC 2 cut(s) 215, 230
BfaI CTAG 1 cut(s) 60
BfoI RGCGCY 1 cut(s) 203
BisI GCNGC 3 cut(s) 27, 155, 198
BlsI GCNGC 3 cut(s) 28, 156, 199
BpiI GAAGAC 1 cut(s) 155
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 260
Bsc4I CCNNNNNNNGG 1 cut(s) 255
BseDI CCNNGG 1 cut(s) 260
BseLI CCNNNNNNNGG 1 cut(s) 255
BseXI GCAGC 2 cut(s) 38, 141
BshFI GGCC 2 cut(s) 145, 259
BslI CCNNNNNNNGG 1 cut(s) 255
BsmAI GTCTC 2 cut(s) 215, 230
BsnI GGCC 2 cut(s) 145, 259
Bso31I GGTCTC 1 cut(s) 215
BspACI CCGC 2 cut(s) 86, 197
BspANI GGCC 2 cut(s) 145, 259
BspTNI GGTCTC 1 cut(s) 215
BssECI CCNNGG 1 cut(s) 260
BssT1I CCWWGG 1 cut(s) 260
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 1 cut(s) 202
BstMAI GTCTC 2 cut(s) 215, 230
BstMWI GCNNNNNNNGC 2 cut(s) 92, 151
BstV1I GCAGC 2 cut(s) 38, 141
BstV2I GAAGAC 1 cut(s) 155
BsuRI GGCC 2 cut(s) 145, 259
CfoI GCGC 1 cut(s) 202
CseI GACGC 1 cut(s) 160
CviJI RGCY 5 cut(s) 29, 68, 145, 218, 259
CviKI_1 RGCY 5 cut(s) 29, 68, 145, 218, 259
DraI TTTAAA 1 cut(s) 175
EaeI YGGCCR 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 260
Eco31I GGTCTC 1 cut(s) 215
EcoT14I CCWWGG 1 cut(s) 260
ErhI CCWWGG 1 cut(s) 260
FaiI YATR 6 cut(s) 32, 54, 102, 122, 256, 271
Fnu4HI GCNGC 3 cut(s) 27, 155, 198
Fsp4HI GCNGC 3 cut(s) 27, 155, 198
FspBI CTAG 1 cut(s) 60
GlaI GCGC 1 cut(s) 201
GluI GCNGC 3 cut(s) 27, 155, 198
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 2 cut(s) 145, 259
HgaI GACGC 1 cut(s) 160
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 1 cut(s) 134
Hpy8I GTNNAC 1 cut(s) 112
HpyAV CCTTC 1 cut(s) 259
HpyCH4V TGCA 2 cut(s) 95, 120
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 151
HspAI GCGC 1 cut(s) 200
LpnPI CCDG 2 cut(s) 143, 167
Lsp1109I GCAGC 2 cut(s) 38, 141
MaeI CTAG 1 cut(s) 60
MboII GAAGA 2 cut(s) 155, 160
MnlI CCTC 1 cut(s) 73
MseI TTAA 1 cut(s) 174
MslI CAYNNNNRTG 1 cut(s) 125
MwoI GCNNNNNNNGC 2 cut(s) 92, 151
NmeAIII GCCGAG 1 cut(s) 194
PflMI CCANNNNNTGG 1 cut(s) 255
PkrI GCNGC 3 cut(s) 28, 156, 199
RseI CAYNNNNRTG 1 cut(s) 125
SaqAI TTAA 1 cut(s) 174
SatI GCNGC 3 cut(s) 27, 155, 198
SetI ASST 3 cut(s) 31, 70, 270
SgeI CNNG 9 cut(s) 72, 108, 127, 153, 170, 179, 194, 226, 262
SmiMI CAYNNNNRTG 1 cut(s) 125
SsiI CCGC 2 cut(s) 86, 197
SspMI CTAG 1 cut(s) 60
StyI CCWWGG 1 cut(s) 260
TaqI TCGA 1 cut(s) 242
TauI GCSGC 1 cut(s) 200
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TseI GCWGC 2 cut(s) 26, 154
Van91I CCANNNNNTGG 1 cut(s) 255
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.