Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008577

Physical Location & Seq

Genomic Coordinates Forward (+)

67624655 .. 67628658

Gene Structure 4004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0493600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGAGATGGTGTCGTCGGTTAGGGCCCTGCTTTTGGTGGCTTGTTTCAGCTGGTTGTTTCTGGCACCAGCGGAATGCCTGGAACGACATTACAAGTTTAATGTGGTGCTGAAGAAAACCTCACGGCTGTGCTCAAGCAAGCCCATTGTCACCATCAACGGAAAGTACCCCGGTCCCACCATATATGCCAGGGAATATGACACCGTCCTTGTCAAGGTTGTCAACCACGTCAAGTACAATGTTAGCATCCATTGGCATGGGATCAGACAACTGAGAAATGGCTGGGCTGATGGACCTGCATACATCACTCAGTGCCCAATTCAGCCCGGACAACAGTATGTGTACAACTTCACCGTCACCGGCCAAAGAGGCACACTTTGGTGGCATGCACACATCCTCTGGCTCAGAGCTACCGTCTACGGCGCCTTGGTCGTCTTACCCAAGCTTGGAGTCCCATATCCCTTTCCTACACCCAAGAAAGAAGTTGTGGTTATTCTAGGTGAATGGTGGAAATCAGATGTGGAAGCTGTTATCAATGAGGCTCTGAAATCTGGGGCAGCCCCAAATGTTTCTGATGCTCACACAATTAATGGCTACCCAGGCCCTCTCTCACTCTGCTCCTCACAAGGAGGGTACAAATTACCAGTACTACCAGGCCACACATATTTACTAAGAATCATCAATGCTGCACTGAATGATGAGCTCTTCTTCAAGGTTGCCAACCACAAACTAACCGTAGTTGAAGTGGATGCCGTGTACACGAAACCCTTCGAAACCACCACCATTCTCATAGCACCTGGCCAAACCACAAACGTCCTTCTGACAGCAGACCGCAGCACAGGCAAGTACTTGGTTGCTGCCTCGCCTTTCATGGACAGTCCGACAGTAGCTGTAGACAACAAGACTGCCACTGCTACCTTGCACTATAGGGGCAGCCTTGCAAGCACCTCCACCATTCTCACCGTCCCTCCTCCTCAAAATGCCACACGCCTAGCCACAAAGTTCACAAAGTCCCTTCGCAGCCTAAATTCAGTCACCTACCCTGCTAAGGTCCCATTGAAAATTGATCACTCGTTGATGTTCACTGTCAGCCTTGGACTTCAAACTTGTGCTACTTGTGCCAATGGTAACAGAGTGGTGGCGGATCTTAACAATGTCACATTTGTGATGCCAAAGATTTCTCTCCTTCAAGCACATGTCTTCAACATAAGTGGAGTTTTCACTGATGATTTCCCCGGAAACCCTTTGATGCCTTATAATTATACCGGAGCACAGCAGCCAACGAATATGCTGACCATGAAGGGCACTAGGCTTTATAGACTTGCTTACAACTCTACAGTGCAGCTAGTACTACAAGACACTGGAATGATAGCCCCTGAAAACCATCCAGTGCATCTTCATGGGTTCAACTTCTTTGAGGTTGGGAGGGGATTGGGAAATTTCAACCCCAAGACAGATCCGAGAAGATTCAACCTTATTGACCCTGTCGAGAGGAACACAGTTGGAGTGCCATCAGGTGGATGGGCCGCTATCAGATTTAGGGCTGATAATCCAGGTAAACACATTGGGTTTGGTTTATGCATTGTCATCTTGAGCTTCACACAACATGGGGGCTTAAGATGGCATTTGTGGTGGACAATGGCAAAGGCCCCAACGAGTCTGTTCTACCGCCTCCAAGCGATCTTCCCAAATGTTAGCGATGAAGAACACCACTACACAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0003674 GO:0005484 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006887 GO:0006906 GO:0006996 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0031201 GO:0032940 GO:0032991 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046903 GO:0048284 GO:0051179 GO:0051234 GO:0061024 GO:0061025 GO:0071840 GO:0071944 GO:0090174 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Longin

Protein Analysis

574

Amino Acids

63.66

Weight (kDa)

9.41

Isoelectric Point (pI)

35.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 148	1.5e-42	Multicopper oxidase
Cu-oxidase	PF00394	161 - 312	3.5e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	417 - 520	7.4e-27	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33475 AT1G33475 AT4G10170 AT4G10170
fragaria_vesca	FvH4_2g00290 FvH4_2g00290
malus_domestica	MD05G1005900.v1.1
prunus_persica	Prupe.8G002800_v2.0.a1
pyrus_communis	pycom05g00110
rosa_chinensis	RchiOBHm_Chr6g0249571
rosa_laevigata	RLG00000015561
rosa_multiflora	Rmu_co8370991.1_g000001 Rmu_sc0006936.1_g000007 Rmu_sc0013555.1_g000006
rosa_roxburghii	Rroxscaffold_7G00217540
rosa_rugosa	Rorug05G0493600 Rorug05G0493600 Rorug05G0493700
rosa_samantha	Rh6AG003500 Rh6BG006700 Rh6CG002600 Rh6DG002400
rosa_wichuraiana	Rw6G000390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1257
Acc36I	ACCTGC	1 cut(s)	304
AccB1I	GGYRCC	2 cut(s)	64, 422
AccB7I	CCANNNNNTGG	1 cut(s)	1517
AccI	GTMKAC	2 cut(s)	417, 894
AciI	CCGC	5 cut(s)	71, 832, 1142, 1527, 1669
AclWI	GGATC	3 cut(s)	269, 1152, 1451
AcoI	YGGCCR	2 cut(s)	361, 799
AcsI	RAATTY	2 cut(s)	1027, 1438
AcuI	CTGAAG	1 cut(s)	131
AcyI	GRCGYC	1 cut(s)	423
AdeI	CACNNNGTG	1 cut(s)	312
AfaI	GTAC	8 cut(s)	167, 236, 344, 635, 648, 758, 848, 1350
AfiI	CCNNNNNNNGG	5 cut(s)	34, 214, 446, 1048, 1517
AflII	CTTAAG	1 cut(s)	1615
AflIII	ACRYGT	1 cut(s)	1195
AgsI	TTSAA	9 cut(s)	712, 743, 1060, 1103, 1190, 1204, 1408, 1444, 1471
AjiI	CACGTC	1 cut(s)	229
AjnI	CCWGG	6 cut(s)	78, 188, 598, 652, 796, 1552
AleI	CACNNNNGTG	3 cut(s)	127, 379, 1163
AluBI	AGCT	8 cut(s)	51, 410, 445, 527, 703, 890, 1345, 1596
AluI	AGCT	8 cut(s)	51, 410, 445, 527, 703, 890, 1345, 1596
Alw21I	GWGCWC	3 cut(s)	134, 705, 1273
AlwI	GGATC	3 cut(s)	269, 1152, 1451
AlwNI	CAGNNNCTG	1 cut(s)	890
AoxI	GGCC	7 cut(s)	24, 361, 601, 655, 799, 1524, 1647
ApaI	GGGCCC	1 cut(s)	28
ApeKI	GCWGC	8 cut(s)	557, 686, 834, 857, 933, 1020, 1276, 1342
ApoI	RAATTY	2 cut(s)	1027, 1438
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	1 cut(s)	767
AspLEI	GCGC	1 cut(s)	425
AspS9I	GGNCC	8 cut(s)	24, 25, 173, 293, 602, 1051, 1524, 1648
AsuC2I	CCSGG	3 cut(s)	171, 327, 1236
AsuHPI	GGTGA	6 cut(s)	142, 343, 349, 512, 952, 1027
AsuII	TTCGAA	1 cut(s)	771
AvaII	GGWCC	3 cut(s)	173, 293, 1051
BaeGI	GKGCMC	3 cut(s)	28, 317, 1307
BalI	TGGCCA	1 cut(s)	801
BanI	GGYRCC	2 cut(s)	64, 422
BanII	GRGCYC	2 cut(s)	28, 705
BbsI	GAAGAC	1 cut(s)	1192
Bbv12I	GWGCWC	3 cut(s)	134, 705, 1273
BbvI	GCAGC	8 cut(s)	569, 673, 844, 846, 945, 1032, 1288, 1354
BccI	CCATC	6 cut(s)	161, 284, 1392, 1515, 1519, 1614
BceAI	ACGGC	3 cut(s)	140, 436, 737
BciT130I	CCWGG	6 cut(s)	80, 190, 600, 654, 798, 1554
BclI	TGATCA	1 cut(s)	1066
BcnI	CCSGG	3 cut(s)	171, 327, 1236
BfaI	CTAG	4 cut(s)	497, 992, 1308, 1346
BfmI	CTRYAG	3 cut(s)	891, 925, 1335
BfoI	RGCGCY	1 cut(s)	426
BfrI	CTTAAG	1 cut(s)	1615
BfuAI	ACCTGC	1 cut(s)	304
BglI	GCCNNNNNGGC	1 cut(s)	369
BisI	GCNGC	9 cut(s)	558, 687, 835, 858, 934, 1021, 1277, 1343, 1527
BlsI	GCNGC	9 cut(s)	559, 688, 836, 859, 935, 1022, 1278, 1344, 1528
BmcAI	AGTACT	3 cut(s)	648, 848, 1350
Bme1390I	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
Bme18I	GGWCC	3 cut(s)	173, 293, 1051
BmgBI	CACGTC	1 cut(s)	229
BmgT120I	GGNCC	8 cut(s)	24, 25, 173, 293, 602, 1051, 1524, 1648
BmiI	GGNNCC	6 cut(s)	26, 66, 175, 424, 1053, 1650
BmrFI	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
BmsI	GCATC	6 cut(s)	255, 565, 739, 1158, 1239, 1402
BpiI	GAAGAC	1 cut(s)	1192
Bpu10I	CCTNAGC	1 cut(s)	1047
Bpu14I	TTCGAA	1 cut(s)	771
BpuEI	CTTGAG	2 cut(s)	118, 1612
BpuMI	CCSGG	3 cut(s)	171, 327, 1236
BsaHI	GRCGYC	1 cut(s)	423
BsaJI	CCNNGG	6 cut(s)	169, 189, 426, 598, 1093, 1234
BsaWI	WCCGGW	1 cut(s)	1265
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 952, 982
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 214, 446, 1048, 1517
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	3 cut(s)	644, 1366, 1388
BseBI	CCWGG	6 cut(s)	80, 190, 600, 654, 798, 1554
BseDI	CCNNGG	6 cut(s)	169, 189, 426, 598, 1093, 1234
BseGI	GGATG	5 cut(s)	246, 393, 754, 1384, 1526
BseLI	CCNNNNNNNGG	5 cut(s)	34, 214, 446, 1048, 1517
BseMII	CTCAG	3 cut(s)	263, 323, 418
BseNI	ACTGG	3 cut(s)	644, 1366, 1388
BseRI	GAGGAG	3 cut(s)	610, 960, 963
BseSI	GKGCMC	3 cut(s)	28, 317, 1307
BseXI	GCAGC	8 cut(s)	569, 673, 844, 846, 945, 1032, 1288, 1354
BseYI	CCCAGC	1 cut(s)	282
BsgI	GTGCAG	2 cut(s)	672, 1361
BshFI	GGCC	7 cut(s)	26, 363, 603, 657, 801, 1526, 1649
BshNI	GGYRCC	2 cut(s)	64, 422
BsiHKAI	GWGCWC	3 cut(s)	134, 705, 1273
BsiSI	CCGG	5 cut(s)	171, 327, 360, 1236, 1266
BslFI	GGGAC	5 cut(s)	159, 437, 950, 997, 1037
BslI	CCNNNNNNNGG	5 cut(s)	34, 214, 446, 1048, 1517
BsmFI	GGGAC	5 cut(s)	159, 437, 950, 997, 1037
BsmI	GAATGC	1 cut(s)	80
BsnI	GGCC	7 cut(s)	26, 363, 603, 657, 801, 1526, 1649
Bsp119I	TTCGAA	1 cut(s)	771
Bsp120I	GGGCCC	1 cut(s)	24
Bsp1286I	GDGCHC	6 cut(s)	28, 134, 317, 705, 1273, 1307
Bsp1407I	TGTACA	2 cut(s)	342, 756
Bsp143I	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
BspACI	CCGC	5 cut(s)	71, 832, 1142, 1527, 1669
BspANI	GGCC	7 cut(s)	26, 363, 603, 657, 801, 1526, 1649
BspCNI	CTCAG	3 cut(s)	264, 322, 417
BspLI	GGNNCC	6 cut(s)	26, 66, 175, 424, 1053, 1650
BspMI	ACCTGC	1 cut(s)	304
BspPI	GGATC	3 cut(s)	269, 1152, 1451
BspQI	GCTCTTC	1 cut(s)	710
BspT104I	TTCGAA	1 cut(s)	771
BspT107I	GGYRCC	2 cut(s)	64, 422
BspTI	CTTAAG	1 cut(s)	1615
BsrFI	RCCGGY	1 cut(s)	359
BsrGI	TGTACA	2 cut(s)	342, 756
BsrI	ACTGG	3 cut(s)	644, 1366, 1388
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	6 cut(s)	169, 189, 426, 598, 1093, 1234
BssMI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
BssNI	GRCGYC	1 cut(s)	423
BssT1I	CCWWGG	2 cut(s)	426, 1093
Bst2UI	CCWGG	6 cut(s)	80, 190, 600, 654, 798, 1554
Bst6I	CTCTTC	1 cut(s)	710
BstACI	GRCGYC	1 cut(s)	423
BstAFI	CTTAAG	1 cut(s)	1615
BstAUI	TGTACA	2 cut(s)	342, 756
BstBI	TTCGAA	1 cut(s)	771
BstC8I	GCNNGC	3 cut(s)	140, 387, 943
BstDEI	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
BstENI	CCTNNNNNAGG	1 cut(s)	212
BstF5I	GGATG	5 cut(s)	246, 393, 754, 1384, 1526
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	1 cut(s)	425
BstKTI	GATC	5 cut(s)	264, 1069, 1147, 1459, 1683
BstMBI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
BstMWI	GCNNNNNNNGC	5 cut(s)	369, 600, 840, 942, 1118
BstNI	CCWGG	6 cut(s)	80, 190, 600, 654, 798, 1554
BstNSI	RCATGY	2 cut(s)	389, 1199
BstSCI	CCNGG	9 cut(s)	78, 169, 188, 325, 598, 652, 796, 1234, 1552
BstSFI	CTRYAG	3 cut(s)	891, 925, 1335
BstSLI	GKGCMC	3 cut(s)	28, 317, 1307
BstV1I	GCAGC	8 cut(s)	569, 673, 844, 846, 945, 1032, 1288, 1354
BstV2I	GAAGAC	1 cut(s)	1192
BstX2I	RGATCY	2 cut(s)	1144, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	257
BstYI	RGATCY	2 cut(s)	1144, 1456
BsuRI	GGCC	7 cut(s)	26, 363, 603, 657, 801, 1526, 1649
BtgZI	GCGATG	1 cut(s)	1713
BtrI	CACGTC	1 cut(s)	229
BtsCI	GGATG	5 cut(s)	246, 393, 754, 1384, 1526
BtsI	GCAGTG	1 cut(s)	909
BtsIMutI	CAGTG	8 cut(s)	317, 689, 909, 1083, 1221, 1344, 1359, 1395
BveI	ACCTGC	1 cut(s)	304
Cac8I	GCNNGC	3 cut(s)	140, 387, 943
CaiI	CAGNNNCTG	1 cut(s)	890
CfoI	GCGC	1 cut(s)	425
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	8 cut(s)	24, 25, 173, 293, 602, 1051, 1524, 1648
Csp6I	GTAC	8 cut(s)	166, 235, 343, 634, 647, 757, 847, 1349
CspCI	CAANNNNNGTGG	2 cut(s)	1192, 1227
CviAII	CATG	7 cut(s)	257, 386, 871, 1196, 1297, 1400, 1607
CviQI	GTAC	8 cut(s)	166, 235, 343, 634, 647, 757, 847, 1349
DdeI	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
DinI	GGCGCC	1 cut(s)	424
DpnI	GATC	5 cut(s)	263, 1068, 1146, 1458, 1682
DpnII	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
DraIII	CACNNNGTG	1 cut(s)	312
EaeI	YGGCCR	2 cut(s)	361, 799
Eam1104I	CTCTTC	1 cut(s)	710
EarI	CTCTTC	1 cut(s)	710
EciI	GGCGGA	1 cut(s)	1157
Ecl136II	GAGCTC	1 cut(s)	703
Eco130I	CCWWGG	2 cut(s)	426, 1093
Eco24I	GRGCYC	2 cut(s)	28, 705
Eco47I	GGWCC	3 cut(s)	173, 293, 1051
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	1 cut(s)	131
EcoICRI	GAGCTC	1 cut(s)	703
EcoNI	CCTNNNNNAGG	1 cut(s)	212
EcoO109I	RGGNCCY	5 cut(s)	24, 25, 602, 1051, 1648
EcoRII	CCWGG	6 cut(s)	78, 188, 598, 652, 796, 1552
EcoT14I	CCWWGG	2 cut(s)	426, 1093
EcoT22I	ATGCAT	1 cut(s)	1583
EcoT38I	GRGCYC	2 cut(s)	28, 705
EgeI	GGCGCC	1 cut(s)	424
EheI	GGCGCC	1 cut(s)	424
ErhI	CCWWGG	2 cut(s)	426, 1093
FaeI	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1610
FaqI	GGGAC	5 cut(s)	159, 437, 950, 997, 1037
FatI	CATG	7 cut(s)	256, 385, 870, 1195, 1296, 1399, 1606
FbaI	TGATCA	1 cut(s)	1066
FblI	GTMKAC	2 cut(s)	417, 894
Fnu4HI	GCNGC	9 cut(s)	558, 687, 835, 858, 934, 1021, 1277, 1343, 1527
FokI	GGATG	5 cut(s)	233, 380, 761, 1371, 1533
FriOI	GRGCYC	2 cut(s)	28, 705
Fsp4HI	GCNGC	9 cut(s)	558, 687, 835, 858, 934, 1021, 1277, 1343, 1527
FspBI	CTAG	4 cut(s)	497, 992, 1308, 1346
GlaI	GCGC	1 cut(s)	424
GluI	GCNGC	9 cut(s)	558, 687, 835, 858, 934, 1021, 1277, 1343, 1527
GsaI	CCCAGC	1 cut(s)	286
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	7 cut(s)	26, 363, 603, 657, 801, 1526, 1649
HapII	CCGG	5 cut(s)	171, 327, 360, 1236, 1266
HhaI	GCGC	1 cut(s)	425
Hin1I	GRCGYC	1 cut(s)	423
Hin1II	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1610
Hin6I	GCGC	1 cut(s)	423
HinP1I	GCGC	1 cut(s)	423
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	443
HinfI	GANTC	4 cut(s)	450, 675, 1467, 1657
HpaII	CCGG	5 cut(s)	171, 327, 360, 1236, 1266
HphI	GGTGA	6 cut(s)	142, 343, 349, 512, 952, 1027
Hpy188I	TCNGA	9 cut(s)	266, 407, 517, 546, 574, 822, 882, 1461, 1535
Hpy188III	TCNNGA	2 cut(s)	1489, 1591
Hpy99I	CGWCG	1 cut(s)	19
HpyAV	CCTTC	5 cut(s)	778, 827, 1025, 1196, 1294
HpyCH4IV	ACGT	2 cut(s)	228, 813
HpyCH4V	TGCA	8 cut(s)	299, 389, 689, 922, 941, 1342, 1393, 1581
HpyF10VI	GCNNNNNNNGC	5 cut(s)	369, 600, 840, 942, 1118
HpyF3I	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
HpySE526I	ACGT	2 cut(s)	228, 813
Hsp92I	GRCGYC	1 cut(s)	423
Hsp92II	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1610
HspAI	GCGC	1 cut(s)	423
KasI	GGCGCC	1 cut(s)	422
Ksp22I	TGATCA	1 cut(s)	1066
Kzo9I	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
LguI	GCTCTTC	1 cut(s)	710
LmnI	GCTCC	2 cut(s)	623, 1268
Lsp1109I	GCAGC	8 cut(s)	569, 673, 844, 846, 945, 1032, 1288, 1354
LweI	GCATC	6 cut(s)	255, 565, 739, 1158, 1239, 1402
MaeI	CTAG	4 cut(s)	497, 992, 1308, 1346
MaeII	ACGT	2 cut(s)	228, 813
MaeIII	GTNAC	5 cut(s)	148, 355, 1033, 1127, 1156
MalI	GATC	5 cut(s)	263, 1068, 1146, 1458, 1682
MboI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
MboII	GAAGA	8 cut(s)	124, 697, 700, 1192, 1388, 1476, 1675, 1715
MflI	RGATCY	2 cut(s)	1144, 1456
MhlI	GDGCHC	6 cut(s)	28, 134, 317, 705, 1273, 1307
MlsI	TGGCCA	1 cut(s)	801
MluCI	AATT	7 cut(s)	318, 585, 638, 1027, 1062, 1258, 1438
MluNI	TGGCCA	1 cut(s)	801
Mly113I	GGCGCC	1 cut(s)	423
MlyI	GAGTC	2 cut(s)	459, 1666
MmeI	TCCRAC	2 cut(s)	905, 1483
Mox20I	TGGCCA	1 cut(s)	801
Mph1103I	ATGCAT	1 cut(s)	1583
MroXI	GAANNNNTTC	1 cut(s)	767
MscI	TGGCCA	1 cut(s)	801
MseI	TTAA	4 cut(s)	99, 588, 1149, 1616
MslI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
Msp20I	TGGCCA	1 cut(s)	801
MspA1I	CMGCKG	2 cut(s)	51, 71
MspCI	CTTAAG	1 cut(s)	1615
MspI	CCGG	5 cut(s)	171, 327, 360, 1236, 1266
MspR9I	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
Mva1269I	GAATGC	1 cut(s)	80
MvaI	CCWGG	6 cut(s)	80, 190, 600, 654, 798, 1554
MwoI	GCNNNNNNNGC	5 cut(s)	369, 600, 840, 942, 1118
NarI	GGCGCC	1 cut(s)	423
NciI	CCSGG	3 cut(s)	171, 327, 1236
NdeII	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
NlaIII	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1610
NlaIV	GGNNCC	6 cut(s)	26, 66, 175, 424, 1053, 1650
NmuCI	GTSAC	4 cut(s)	148, 355, 1033, 1156
NsiI	ATGCAT	1 cut(s)	1583
NspI	RCATGY	2 cut(s)	389, 1199
NspV	TTCGAA	1 cut(s)	771
OliI	CACNNNNGTG	3 cut(s)	127, 379, 1163
PaeI	GCATGC	1 cut(s)	389
PciI	ACATGT	1 cut(s)	1195
PciSI	GCTCTTC	1 cut(s)	710
PctI	GAATGC	1 cut(s)	80
PdmI	GAANNNNTTC	1 cut(s)	767
PfeI	GAWTC	2 cut(s)	675, 1467
PflFI	GACNNNGTC	2 cut(s)	203, 1484
PflMI	CCANNNNNTGG	1 cut(s)	1517
PkrI	GCNGC	9 cut(s)	559, 688, 836, 859, 935, 1022, 1278, 1344, 1528
PleI	GAGTC	2 cut(s)	458, 1665
PluTI	GGCGCC	1 cut(s)	426
PpsI	GAGTC	2 cut(s)	458, 1665
PpuMI	RGGWCCY	1 cut(s)	1051
PscI	ACATGT	1 cut(s)	1195
PshBI	ATTAAT	1 cut(s)	588
PsiI	TTATAA	1 cut(s)	1257
Psp124BI	GAGCTC	1 cut(s)	705
Psp5II	RGGWCCY	1 cut(s)	1051
Psp6I	CCWGG	6 cut(s)	78, 188, 598, 652, 796, 1552
PspFI	CCCAGC	1 cut(s)	282
PspGI	CCWGG	6 cut(s)	78, 188, 598, 652, 796, 1552
PspN4I	GGNNCC	6 cut(s)	26, 66, 175, 424, 1053, 1650
PspOMI	GGGCCC	1 cut(s)	24
PspPI	GGNCC	8 cut(s)	24, 25, 173, 293, 602, 1051, 1524, 1648
PspPPI	RGGWCCY	1 cut(s)	1051
PstNI	CAGNNNCTG	1 cut(s)	890
PsuI	RGATCY	2 cut(s)	1144, 1456
PsyI	GACNNNGTC	2 cut(s)	203, 1484
PvuII	CAGCTG	1 cut(s)	51
RsaI	GTAC	8 cut(s)	167, 236, 344, 635, 648, 758, 848, 1350
RsaNI	GTAC	8 cut(s)	166, 235, 343, 634, 647, 757, 847, 1349
RseI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
SacI	GAGCTC	1 cut(s)	705
SapI	GCTCTTC	1 cut(s)	710
SaqAI	TTAA	4 cut(s)	99, 588, 1149, 1616
SatI	GCNGC	9 cut(s)	558, 687, 835, 858, 934, 1021, 1277, 1343, 1527
Sau3AI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1680
Sau96I	GGNCC	8 cut(s)	24, 25, 173, 293, 602, 1051, 1524, 1648
ScaI	AGTACT	3 cut(s)	648, 848, 1350
SchI	GAGTC	2 cut(s)	459, 1666
ScrFI	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
SduI	GDGCHC	6 cut(s)	28, 134, 317, 705, 1273, 1307
SfaNI	GCATC	6 cut(s)	255, 565, 739, 1158, 1239, 1402
SfcI	CTRYAG	3 cut(s)	891, 925, 1335
SfoI	GGCGCC	1 cut(s)	424
SfuI	TTCGAA	1 cut(s)	771
SinI	GGWCC	3 cut(s)	173, 293, 1051
SmiMI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
SmlI	CTYRAG	3 cut(s)	133, 1591, 1615
SmoI	CTYRAG	3 cut(s)	133, 1591, 1615
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	7 cut(s)	318, 585, 638, 1027, 1062, 1258, 1438
SsiI	CCGC	5 cut(s)	71, 832, 1142, 1527, 1669
SspDI	GGCGCC	1 cut(s)	422
SspMI	CTAG	4 cut(s)	497, 992, 1308, 1346
SstI	GAGCTC	1 cut(s)	705
StyD4I	CCNGG	9 cut(s)	78, 169, 188, 325, 598, 652, 796, 1234, 1552
StyI	CCWWGG	2 cut(s)	426, 1093
TaiI	ACGT	2 cut(s)	231, 816
TaqI	TCGA	2 cut(s)	771, 1488
TasI	AATT	7 cut(s)	318, 585, 638, 1027, 1062, 1258, 1438
TatI	WGTACW	6 cut(s)	234, 342, 646, 756, 846, 1348
TauI	GCSGC	1 cut(s)	1529
TfiI	GAWTC	2 cut(s)	675, 1467
Tru1I	TTAA	4 cut(s)	99, 588, 1149, 1616
Tru9I	TTAA	4 cut(s)	99, 588, 1149, 1616
TscAI	CASTG	8 cut(s)	317, 696, 916, 1090, 1228, 1344, 1366, 1395
TseFI	GTSAC	4 cut(s)	148, 355, 1033, 1156
TseI	GCWGC	8 cut(s)	557, 686, 834, 857, 933, 1020, 1276, 1342
Tsp45I	GTSAC	4 cut(s)	148, 355, 1033, 1156
TspDTI	ATGAA	4 cut(s)	859, 1313, 1388, 1716
TspGWI	ACGGA	1 cut(s)	174
TspRI	CASTG	8 cut(s)	317, 696, 916, 1090, 1228, 1344, 1366, 1395
Tth111I	GACNNNGTC	2 cut(s)	203, 1484
Van91I	CCANNNNNTGG	1 cut(s)	1517
Vha464I	CTTAAG	1 cut(s)	1615
VpaK11BI	GGWCC	3 cut(s)	173, 293, 1051
VspI	ATTAAT	1 cut(s)	588
XagI	CCTNNNNNAGG	1 cut(s)	212
XapI	RAATTY	2 cut(s)	1027, 1438
XceI	RCATGY	2 cut(s)	389, 1199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1518
XmiI	GTMKAC	2 cut(s)	417, 894
XmnI	GAANNNNTTC	1 cut(s)	767
XspI	CTAG	4 cut(s)	497, 992, 1308, 1346
ZrmI	AGTACT	3 cut(s)	648, 848, 1350
Zsp2I	ATGCAT	1 cut(s)	1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.