Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005231

Physical Location & Seq

Genomic Coordinates Forward (+)

2066803 .. 2069067

Gene Structure 2265 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0015800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGCAGGTGGTGGAGAGGATCATGCAATAGGGATTGACTTGGGGACAACCTATTCGTGCGTGGCAGTGTGGCAGCACGATCGAGTTGAGATAATAGTGAACGATCAAGGCAACAGAACTACTCCATCTTATGTTGCCTTCACTGATACTGAGCAATTGGTAGGAGATGCAGCACTTAACCAGATCATCAAAAACCCTACCAACTCGGTCTTTGATGCTAAGCGATTGATAGGTAGAAGATTTAGCGATGCATGTGTTCAAAGTGATATGAAGCTTTGGCCATTCAAGGTCATTGAAGGTCCTAATGACAAGCCCATTATTGTTGTGCAAGACAAGGGCCAAGAGAAACACTTCGCTGCTGAAGAAATATCATCCATGGTACTCGCAAAGATGCATAAAGTTGCTGAAGCCTATCTTGGATCAAGTGTAAAAAATGCTGTTATTACTGTCCCTGCTTACTTTAATGACGCACAACGTCAGGCTACCAAAAATGCTGCTGAAATGGCTGACCTAAATGTGATTCGTATAATAAATGAACCAACTGCTGCAGCCATTGCTTACGGCCTTGATAAGAAAGCCGGTTCAGAGAGCAAAAGAACTGTGATGATATTTGATTTAGGTGGTGGTACTTTAGATGTGTCACTACTAGTAATAGGTCATGGCGTCTTTGATGTGATGGCCACTGCTGGAGACACTCATCTTGGAGGTGAAGATTTTGATAACAAAATGGTGAACTATTGTGCCGAGCAATTCAAGAGGAAGCACGACTTGGACGTTAGTGGGAACTTGAGAGCTCTTACGAGGTTGAAAAGTGCTTGTGAGAAGGCAAAGAGGAGACTGTCATTCGCATCTTCAGTTGACATCGACATTGATTGTTTGGACCAGGGTGTAGATTTCAGTGCAACTATTACCCGTGCCAAATTTGAACAACTGAACATGGAATTCTTTAAAAAGTGCATGGAACCTGTGAAGAAGTGTTTGAGCGATGCTGGCATGGACGCAAGCAGTGTGGATGATGTTGTTCTTGCTGGCGGCTCTTCTAGAATTCCCATGGTGCAACAGCTACTACAAGACTTGTTCCATGGGAAGGAGTTGTGCAAGGGCATCAATCCAGATGAGGCGGTTGCCTATGGAGCCGCCGCTCAAGCTGCAGTCTTAAGTGCTTGTGGTCACAATAATGGGAATAGGCTTCAACTTTTCACTCTCTGTGATGTCACCCCTCTGTCACTTGGGTTGGAGAGTACCGAACCCGACAGTTTCAGGAAACATATGAATTTTTTGATCCCAAGAAATTCCAGCATCCCTGTGATGAAGAAGAGCACTTTCACTACAATTTATGATAACCAAGCTTCCATAAGCTTTCCCATCTACGAGGGTGAGAGTACTACACCTGCAGAGAATAACTTTTTGGGTGAATTTTCCCTTGATGACATTCCTGCAGCTCCTGCGGGAGCTCCTAATTTTGAGGTTTGCTTCGATATTGATGCAAATGGTATCTTGAATGTCTCTGCCGAGGACATGTCTACTGGAAGAAAGAAGGGGATTACAATCAATATGGAAAAAAGAAGCTTGGGAACTGAGAAGATGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061649 GO:0065007 GO:0080090 GO:0140030 GO:0140035 GO:0140036 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

530

Amino Acids

57.56

Weight (kDa)

5.18

Isoelectric Point (pI)

37.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	9 - 522	6.7e-203	Hsp70 protein
MreB_Mbl	PF06723	126 - 382	9.7e-17	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21650
fragaria_vesca	FvH4_2g08910 FvH4_2g08910 FvH4_6g06380 FvH4_6g06380
malus_domestica	MD05G1065500.v1.1 MD10G1075200.v1.1
prunus_persica	Prupe.8G096300_v2.0.a1
pyrus_communis	pycom05g05690
rosa_chinensis	RchiOBHm_Chr3g0455471 RchiOBHm_Chr6g0264521
rosa_laevigata	RLG00000014247 RLG00000025357
rosa_multiflora	Rmu_sc0000578.1_g000011 Rmu_sc0005281.1_g000011
rosa_roxburghii	Rroxscaffold_176G00431860 Rroxscaffold_6G00424240
rosa_rugosa	Rorug03G0007800 Rorug06G0015800
rosa_samantha	Rh3AG067300 Rh3BG069600 Rh3CG068100 Rh3DG069700 Rh6AG132900 Rh6BG130500 Rh6CG128700 Rh6DG115900
rosa_wichuraiana	Rw0G009760 Rw3G005330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1399
Acc36I	ACCTGC	1 cut(s)	1399
AccBSI	CCGCTC	1 cut(s)	1142
AccI	GTMKAC	1 cut(s)	1523
AciI	CCGC	5 cut(s)	1032, 1121, 1137, 1140, 1448
AclWI	GGATC	3 cut(s)	27, 427, 1276
AcoI	YGGCCR	2 cut(s)	278, 678
AcsI	RAATTY	6 cut(s)	920, 941, 1044, 1273, 1291, 1415
AcuI	CTGAAG	3 cut(s)	381, 426, 837
AcyI	GRCGYC	1 cut(s)	663
AfaI	GTAC	4 cut(s)	381, 628, 1243, 1384
AfiI	CCNNNNNNNGG	1 cut(s)	1087
AflII	CTTAAG	1 cut(s)	1156
AflIII	ACRYGT	1 cut(s)	1518
AgsI	TTSAA	8 cut(s)	260, 286, 296, 754, 808, 926, 1193, 1501
AhlI	ACTAGT	1 cut(s)	646
AjnI	CCWGG	1 cut(s)	882
AjuI	GAANNNNNNNTTGG	6 cut(s)	399, 431, 752, 784, 1391, 1423
AluBI	AGCT	9 cut(s)	274, 794, 1063, 1148, 1349, 1359, 1442, 1454, 1569
AluI	AGCT	9 cut(s)	274, 794, 1063, 1148, 1349, 1359, 1442, 1454, 1569
Alw21I	GWGCWC	3 cut(s)	796, 1322, 1456
Alw26I	GTCTC	3 cut(s)	684, 829, 1510
AlwI	GGATC	3 cut(s)	27, 427, 1276
AlwNI	CAGNNNCTG	1 cut(s)	1445
AoxI	GGCC	4 cut(s)	278, 337, 562, 678
ApeKI	GCWGC	8 cut(s)	73, 170, 356, 494, 545, 548, 1148, 1439
ApoI	RAATTY	6 cut(s)	920, 941, 1044, 1273, 1291, 1415
ArsI	GACNNNNNNTTYG	2 cut(s)	37, 69
Asp700I	GAANNNNTTC	1 cut(s)	350
AspS9I	GGNCC	3 cut(s)	299, 337, 880
AsuHPI	GGTGA	5 cut(s)	719, 742, 1207, 1388, 1424
AvaII	GGWCC	2 cut(s)	299, 880
BalI	TGGCCA	2 cut(s)	280, 680
BanII	GRGCYC	2 cut(s)	796, 1456
Bbv12I	GWGCWC	3 cut(s)	796, 1322, 1456
BbvI	GCAGC	8 cut(s)	85, 182, 343, 481, 532, 560, 1135, 1451
BccI	CCATC	3 cut(s)	133, 670, 1373
BceAI	ACGGC	1 cut(s)	577
BcgI	CGANNNNNNTGC	4 cut(s)	62, 96, 1466, 1500
BciT130I	CCWGG	1 cut(s)	884
BcoDI	GTCTC	3 cut(s)	684, 829, 1510
BcuI	ACTAGT	1 cut(s)	646
BfaI	CTAG	2 cut(s)	647, 1041
BfmI	CTRYAG	4 cut(s)	546, 1149, 1392, 1437
BfrI	CTTAAG	1 cut(s)	1156
BfuAI	ACCTGC	1 cut(s)	1399
BlpI	GCTNAGC	1 cut(s)	219
BmcAI	AGTACT	1 cut(s)	1384
Bme1390I	CCNGG	1 cut(s)	884
Bme18I	GGWCC	2 cut(s)	299, 880
BmgT120I	GGNCC	3 cut(s)	299, 337, 880
BmiI	GGNNCC	2 cut(s)	963, 1135
BmrFI	CCNGG	1 cut(s)	884
BmsI	GCATC	9 cut(s)	157, 205, 238, 381, 857, 976, 1113, 1308, 1474
BpmI	CTGGAG	1 cut(s)	708
Bpu1102I	GCTNAGC	1 cut(s)	219
BpuEI	CTTGAG	2 cut(s)	808, 1128
BsaBI	GATNNNNATC	1 cut(s)	1547
BsaHI	GRCGYC	1 cut(s)	663
BsaJI	CCNNGG	5 cut(s)	375, 883, 1050, 1081, 1512
Bsc4I	CCNNNNNNNGG	1 cut(s)	1087
Bse118I	RCCGGY	1 cut(s)	578
Bse1I	ACTGG	1 cut(s)	1531
Bse3DI	GCAATG	1 cut(s)	552
Bse8I	GATNNNNATC	1 cut(s)	1547
BseBI	CCWGG	1 cut(s)	884
BseDI	CCNNGG	5 cut(s)	375, 883, 1050, 1081, 1512
BseGI	GGATG	3 cut(s)	371, 1018, 1299
BseJI	GATNNNNATC	1 cut(s)	1547
BseLI	CCNNNNNNNGG	1 cut(s)	1087
BseMI	GCAATG	1 cut(s)	552
BseMII	CTCAG	2 cut(s)	141, 1569
BseNI	ACTGG	1 cut(s)	1531
BseRI	GAGGAG	1 cut(s)	847
BseXI	GCAGC	8 cut(s)	85, 182, 343, 481, 532, 560, 1135, 1451
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	4 cut(s)	280, 339, 564, 680
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	3 cut(s)	796, 1322, 1456
BsiSI	CCGG	1 cut(s)	579
BslFI	GGGAC	2 cut(s)	58, 434
BslI	CCNNNNNNNGG	1 cut(s)	1087
BsmAI	GTCTC	3 cut(s)	684, 829, 1510
BsmFI	GGGAC	2 cut(s)	58, 434
BsnI	GGCC	4 cut(s)	280, 339, 564, 680
Bsp1286I	GDGCHC	3 cut(s)	796, 1322, 1456
Bsp143I	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
Bsp1720I	GCTNAGC	1 cut(s)	219
Bsp19I	CCATGG	3 cut(s)	375, 1050, 1081
BspACI	CCGC	5 cut(s)	1032, 1121, 1137, 1140, 1448
BspANI	GGCC	4 cut(s)	280, 339, 564, 680
BspCNI	CTCAG	2 cut(s)	142, 1570
BspLI	GGNNCC	2 cut(s)	963, 1135
BspMAI	CTGCAG	4 cut(s)	550, 1153, 1396, 1441
BspMI	ACCTGC	1 cut(s)	1399
BspPI	GGATC	3 cut(s)	27, 427, 1276
BspQI	GCTCTTC	2 cut(s)	1042, 1310
BspTI	CTTAAG	1 cut(s)	1156
BsrBI	CCGCTC	1 cut(s)	1142
BsrDI	GCAATG	1 cut(s)	552
BsrFI	RCCGGY	1 cut(s)	578
BsrI	ACTGG	1 cut(s)	1531
BssAI	RCCGGY	1 cut(s)	578
BssECI	CCNNGG	5 cut(s)	375, 883, 1050, 1081, 1512
BssMI	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
BssNI	GRCGYC	1 cut(s)	663
BssT1I	CCWWGG	3 cut(s)	375, 1050, 1081
Bst2UI	CCWGG	1 cut(s)	884
Bst4CI	ACNGT	4 cut(s)	448, 601, 840, 1256
Bst6I	CTCTTC	2 cut(s)	1042, 1310
BstACI	GRCGYC	1 cut(s)	663
BstAFI	CTTAAG	1 cut(s)	1156
BstAPI	GCANNNNNTGC	2 cut(s)	554, 1445
BstC8I	GCNNGC	3 cut(s)	991, 1003, 1030
BstDEI	CTNAG	3 cut(s)	150, 219, 1578
BstDSI	CCRYGG	3 cut(s)	375, 1050, 1081
BstF5I	GGATG	3 cut(s)	371, 1018, 1299
BstKTI	GATC	6 cut(s)	22, 82, 106, 186, 422, 1284
BstMAI	GTCTC	3 cut(s)	684, 829, 1510
BstMBI	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
BstMCI	CGRYCG	1 cut(s)	82
BstMWI	GCNNNNNNNGC	7 cut(s)	503, 554, 990, 1133, 1145, 1148, 1445
BstNI	CCWGG	1 cut(s)	884
BstNSI	RCATGY	2 cut(s)	255, 1522
BstSCI	CCNGG	1 cut(s)	882
BstSFI	CTRYAG	4 cut(s)	546, 1149, 1392, 1437
BstV1I	GCAGC	8 cut(s)	85, 182, 343, 481, 532, 560, 1135, 1451
BsuRI	GGCC	4 cut(s)	280, 339, 564, 680
BtgI	CCRYGG	3 cut(s)	375, 1050, 1081
BtgZI	GCGATG	2 cut(s)	261, 999
BtsCI	GGATG	3 cut(s)	371, 1018, 1299
BtsI	GCAGTG	3 cut(s)	72, 681, 1012
BtsIMutI	CAGTG	5 cut(s)	72, 141, 681, 904, 1012
BveI	ACCTGC	1 cut(s)	1399
Cac8I	GCNNGC	3 cut(s)	991, 1003, 1030
CaiI	CAGNNNCTG	1 cut(s)	1445
Cfr10I	RCCGGY	1 cut(s)	578
Cfr13I	GGNCC	3 cut(s)	299, 337, 880
CseI	GACGC	3 cut(s)	476, 652, 1007
Csp6I	GTAC	4 cut(s)	380, 627, 1242, 1383
CspCI	CAANNNNNGTGG	2 cut(s)	990, 1025
CviQI	GTAC	4 cut(s)	380, 627, 1242, 1383
DdeI	CTNAG	3 cut(s)	150, 219, 1578
DpnI	GATC	6 cut(s)	21, 81, 105, 185, 421, 1283
DpnII	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
DraI	TTTAAA	1 cut(s)	949
EaeI	YGGCCR	2 cut(s)	278, 678
Eam1104I	CTCTTC	2 cut(s)	1042, 1310
EarI	CTCTTC	2 cut(s)	1042, 1310
Ecl136II	GAGCTC	2 cut(s)	794, 1454
Eco130I	CCWWGG	3 cut(s)	375, 1050, 1081
Eco24I	GRGCYC	2 cut(s)	796, 1456
Eco47I	GGWCC	2 cut(s)	299, 880
Eco53kI	GAGCTC	2 cut(s)	794, 1454
Eco57I	CTGAAG	3 cut(s)	381, 426, 837
EcoICRI	GAGCTC	2 cut(s)	794, 1454
EcoO109I	RGGNCCY	1 cut(s)	299
EcoRI	GAATTC	2 cut(s)	941, 1044
EcoRII	CCWGG	1 cut(s)	882
EcoT14I	CCWWGG	3 cut(s)	375, 1050, 1081
EcoT22I	ATGCAT	2 cut(s)	253, 396
EcoT38I	GRGCYC	2 cut(s)	796, 1456
ErhI	CCWWGG	3 cut(s)	375, 1050, 1081
FalI	AAGNNNNNCTT	4 cut(s)	399, 431, 752, 784
FaqI	GGGAC	2 cut(s)	58, 434
FauI	CCCGC	1 cut(s)	1441
FauNDI	CATATG	1 cut(s)	1269
FblI	GTMKAC	1 cut(s)	1523
FokI	GGATG	3 cut(s)	358, 1025, 1286
FriOI	GRGCYC	2 cut(s)	796, 1456
FspBI	CTAG	2 cut(s)	647, 1041
GsuI	CTGGAG	1 cut(s)	708
HaeIII	GGCC	4 cut(s)	280, 339, 564, 680
HapII	CCGG	1 cut(s)	579
HgaI	GACGC	3 cut(s)	476, 652, 1007
Hin1I	GRCGYC	1 cut(s)	663
HincII	GTYRAC	1 cut(s)	859
HindII	GTYRAC	1 cut(s)	859
HindIII	AAGCTT	4 cut(s)	272, 1347, 1357, 1567
HinfI	GANTC	1 cut(s)	520
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	5 cut(s)	719, 742, 1207, 1388, 1424
Hpy166II	GTNNAC	4 cut(s)	100, 733, 859, 1524
Hpy188I	TCNGA	1 cut(s)	586
Hpy188III	TCNNGA	5 cut(s)	754, 1041, 1112, 1261, 1498
Hpy8I	GTNNAC	4 cut(s)	100, 733, 859, 1524
HpyAV	CCTTC	5 cut(s)	148, 290, 817, 1081, 1531
HpyCH4III	ACNGT	4 cut(s)	448, 601, 840, 1256
HpyCH4IV	ACGT	2 cut(s)	475, 774
HpyF10VI	GCNNNNNNNGC	7 cut(s)	503, 554, 990, 1133, 1145, 1148, 1445
HpyF3I	CTNAG	3 cut(s)	150, 219, 1578
HpySE526I	ACGT	2 cut(s)	475, 774
Hsp92I	GRCGYC	1 cut(s)	663
Kzo9I	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
LguI	GCTCTTC	2 cut(s)	1042, 1310
LmnI	GCTCC	4 cut(s)	1133, 1447, 1451, 1459
Lsp1109I	GCAGC	8 cut(s)	85, 182, 343, 481, 532, 560, 1135, 1451
LweI	GCATC	9 cut(s)	157, 205, 238, 381, 857, 976, 1113, 1308, 1474
MaeI	CTAG	2 cut(s)	647, 1041
MaeII	ACGT	2 cut(s)	475, 774
MaeIII	GTNAC	4 cut(s)	639, 1169, 1213, 1224
MalI	GATC	6 cut(s)	21, 81, 105, 185, 421, 1283
MbiI	CCGCTC	1 cut(s)	1142
MboI	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
MboII	GAAGA	9 cut(s)	249, 374, 722, 843, 982, 1029, 1324, 1327, 1542
MfeI	CAATTG	1 cut(s)	155
MhlI	GDGCHC	3 cut(s)	796, 1322, 1456
MlsI	TGGCCA	2 cut(s)	280, 680
MluNI	TGGCCA	2 cut(s)	280, 680
MmeI	TCCRAC	1 cut(s)	1215
Mox20I	TGGCCA	2 cut(s)	280, 680
Mph1103I	ATGCAT	2 cut(s)	253, 396
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	2 cut(s)	280, 680
MseI	TTAA	4 cut(s)	177, 462, 948, 1157
MslI	CAYNNNNRTG	2 cut(s)	1176, 1304
Msp20I	TGGCCA	2 cut(s)	280, 680
MspCI	CTTAAG	1 cut(s)	1156
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	1 cut(s)	884
MunI	CAATTG	1 cut(s)	155
MvaI	CCWGG	1 cut(s)	884
MwoI	GCNNNNNNNGC	7 cut(s)	503, 554, 990, 1133, 1145, 1148, 1445
NcoI	CCATGG	3 cut(s)	375, 1050, 1081
NdeI	CATATG	1 cut(s)	1269
NdeII	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
NlaIV	GGNNCC	2 cut(s)	963, 1135
NmeAIII	GCCGAG	2 cut(s)	769, 1537
NmuCI	GTSAC	4 cut(s)	639, 1169, 1213, 1224
NsiI	ATGCAT	2 cut(s)	253, 396
NspI	RCATGY	2 cut(s)	255, 1522
PaqCI	CACCTGC	1 cut(s)	1399
PciI	ACATGT	1 cut(s)	1518
PciSI	GCTCTTC	2 cut(s)	1042, 1310
PcsI	WCGNNNNNNNCGW	1 cut(s)	771
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	1 cut(s)	520
Ple19I	CGATCG	1 cut(s)	82
PpuMI	RGGWCCY	1 cut(s)	299
PscI	ACATGT	1 cut(s)	1518
Psp124BI	GAGCTC	2 cut(s)	796, 1456
Psp5II	RGGWCCY	1 cut(s)	299
Psp6I	CCWGG	1 cut(s)	882
PspGI	CCWGG	1 cut(s)	882
PspN4I	GGNNCC	2 cut(s)	963, 1135
PspPI	GGNCC	3 cut(s)	299, 337, 880
PspPPI	RGGWCCY	1 cut(s)	299
PstI	CTGCAG	4 cut(s)	550, 1153, 1396, 1441
PstNI	CAGNNNCTG	1 cut(s)	1445
PvuI	CGATCG	1 cut(s)	82
RsaI	GTAC	4 cut(s)	381, 628, 1243, 1384
RsaNI	GTAC	4 cut(s)	380, 627, 1242, 1383
RseI	CAYNNNNRTG	2 cut(s)	1176, 1304
SacI	GAGCTC	2 cut(s)	796, 1456
SapI	GCTCTTC	2 cut(s)	1042, 1310
SaqAI	TTAA	4 cut(s)	177, 462, 948, 1157
Sau3AI	GATC	6 cut(s)	19, 79, 103, 183, 419, 1281
Sau96I	GGNCC	3 cut(s)	299, 337, 880
ScaI	AGTACT	1 cut(s)	1384
ScrFI	CCNGG	1 cut(s)	884
SduI	GDGCHC	3 cut(s)	796, 1322, 1456
SfaNI	GCATC	9 cut(s)	157, 205, 238, 381, 857, 976, 1113, 1308, 1474
SfcI	CTRYAG	4 cut(s)	546, 1149, 1392, 1437
SinI	GGWCC	2 cut(s)	299, 880
SmiMI	CAYNNNNRTG	2 cut(s)	1176, 1304
SmlI	CTYRAG	3 cut(s)	787, 1143, 1156
SmoI	CTYRAG	3 cut(s)	787, 1143, 1156
SpeI	ACTAGT	1 cut(s)	646
SsiI	CCGC	5 cut(s)	1032, 1121, 1137, 1140, 1448
SspMI	CTAG	2 cut(s)	647, 1041
SstI	GAGCTC	2 cut(s)	796, 1456
StyD4I	CCNGG	1 cut(s)	882
StyI	CCWWGG	3 cut(s)	375, 1050, 1081
TaaI	ACNGT	4 cut(s)	448, 601, 840, 1256
TaiI	ACGT	2 cut(s)	478, 777
TaqI	TCGA	3 cut(s)	82, 864, 1476
TaqII	GACCGA	1 cut(s)	196
TatI	WGTACW	1 cut(s)	1382
TauI	GCSGC	3 cut(s)	1035, 1139, 1142
TfiI	GAWTC	1 cut(s)	520
Tru1I	TTAA	4 cut(s)	177, 462, 948, 1157
Tru9I	TTAA	4 cut(s)	177, 462, 948, 1157
TscAI	CASTG	5 cut(s)	72, 148, 688, 904, 1012
TseFI	GTSAC	4 cut(s)	639, 1169, 1213, 1224
TseI	GCWGC	8 cut(s)	73, 170, 356, 494, 545, 548, 1148, 1439
Tsp45I	GTSAC	4 cut(s)	639, 1169, 1213, 1224
TspDTI	ATGAA	4 cut(s)	284, 549, 1286, 1325
TspRI	CASTG	5 cut(s)	72, 148, 688, 904, 1012
Vha464I	CTTAAG	1 cut(s)	1156
VpaK11BI	GGWCC	2 cut(s)	299, 880
XapI	RAATTY	6 cut(s)	920, 941, 1044, 1273, 1291, 1415
XbaI	TCTAGA	1 cut(s)	1040
XceI	RCATGY	2 cut(s)	255, 1522
XmiI	GTMKAC	1 cut(s)	1523
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	2 cut(s)	647, 1041
ZrmI	AGTACT	1 cut(s)	1384
Zsp2I	ATGCAT	2 cut(s)	253, 396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.