Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006299

Physical Location & Seq

Genomic Coordinates Reverse (-)

14170084 .. 14177326

Gene Structure 7243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0105600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGGCTGCTGCGGTTATGAGGAAGCTGAGTGCTGCTTTGGCTTCAAAAGGTGCTGATTTTGATGTCGAGAGTTACGAAGATTTGAGCGCGGAGTTGGAATACTCGTTTGCAGTGGAGTATCAAGGTCCTCCGGTGGGTTATGAAATCCCACATGCGTTTCCGATTGACATTCACCGAATCCCGACTGCTGCTCCGGTTTCTTCACCGGCGCTGTTGCACAATCTGTCGCTGCCGATCATCCAGCCCATTGCGAAGTCCAGTCAGAGCAAGAAGGCCAGAGTAGAGTCTAAACTTGGGGATGAAGTAAAGGCGGTTCTTGATTCAGGTGAAGAGAAGGGTGTGTGTAGTGAAGTTGGGAGCTCTGGTGAATTGGGTTGTGGAAAGTTGGAGGGTGAGGTGGAGTTGGGTGAGGATGGTGGAGAAGGTGATTGGGGATCAACAGAGTCTGGGTTGAGCTCAAGAAGTGTTTCCTCTGAGGTTTTCTCTGGCAGAGAGGAAGCTGGTGTGGATGAGATTGTTCCTCACCATGTGAAAAGGCCATCAACTGTGACTTTTCGCGATCCGGATTCGAATGACATAGTTGTGCAGGAAGTGGAGTTCAATGCCTCTGATGGGGATGAGAGTTTGCAAGTGAGGCCGAGGGTGGAGAGGAATGGGAAGAAGGGGTCGTGCTATCGATGTGGGAGAGGGAACAAGTTCACTGAGAAGGAGGTGTGCATTGTTTGTGGTGCAAAGTATTGCTTTGATTGTGTGCTGAGGGCAATGGGGTCAATGCCGGAAGGAAGGAAATGTGTTACTTGCATTCGGTTTGGGATTGATGAGTTGAGGCGAGGGAGTATTGGCAAGTCTTCTAGGATGCTCTGGCGGCTTCTGACTAAGGCGCAAGTGGAAGTGGTCATGAAAGCTGAGATATCATGCCAAGCAAATCAACTGCCAGGCAATCTTGTTTTCGTGAACGACGAGCCTCTTACACAAGAAGAGCTCTCTAGATTGCAAGGTTGCAGAAACCCTCCAAAAAATCTAAAACCAGGATCTTATTGGTATGATAATGTATCTGGGTTTTGGGGAAAGGTTGGGCATAGGCCTTGCCAAGTTATAAGCCCCCAGCTGAATGTTGGGGGCCATTTAAAGGAAAATGCTAGTCATGGGGACACAAAAATAATAATAAACAATCGAGTGATCACCAAATTAGAGGTCTTCATGCTGCAGATGGCAGGAGTGCCATGTGAAGGAAAACTCAACTACTGGGTGAGTGCAGATGGATCCTATCAGGAAGAGGGAATGAATAACGTAAAAGGAAAGATATGGGACACGAAAATAAAGCTGGTTTGTACTATCTTGTCTCTACCAATTCCTTCTGAACCTACAATTCCTCCTCCTGCGGAAGAAGACAGAAACTTTATTGAAGAGAAACTGCTTGACAAACTTGTTTTAGTTGGGTATCATAAATCTGGCTCAAGCACTATATTTAAACAGGCAAAGTTTTTGTATAATGTTCCTTTTTGTGAAGATGAGCGCCAAAATATTAAGTTCATGATCCAAAGCAGATTGTACAGTTATCTTGGTATACTGCTTGAGGGGCGTGAATGGTTTGAAGAAGAAAGTTTGGTTGAAAACAGAAAAGGAGAGCTTCGAGATGAACCTGGTCCTTCAGGAATTACAAGCCAGCTGGACAGTAAAACAACGTATACCATTGGCCCGAGACTGAAATCTTTTGCAGATTGGCTACTAAAGAATATGATATCAGGTACTTTGGAAGCCATATTTCCTGCGGCTACTCGTGAATATGCACCGTTTGTTGAGGAGTTGTGGAATGATCCAGCTATTCAAGCCACATACAACCGGAGGAATGAATTAGAAATGCTACCCAGACAAGCTACATATTTTCTTAATCGGGCTGTAGAAATTTCAAGGACCGATTATGAGCCCTCAGACATGGACATCTTGTACGCAGAGGGAATTACCTCGTCCAACAGCCTTAATACCATGGAATTTTCATTGACTAGATCATCTCAACGTAGCGATCTGGACTCTATCTATCAGCTTAATCCTTCGCAAAGGTATCAGCTCATTAGAGTGCATAGCCTTGGAGGAAGTTGCAAGTTGCTGGAGATGTTTGAAGATGTTGATATGGTCATATTTTGTGTTGCTTTGACAGACTACGATGAGTTTTGTGAAGATGCTAGTGGGGTATCCATAAACAAGATGATGGCAAGTAAGCAGCTGTTTGAAAGTATTGCAACTCATCCGGCTTTTGATCAGAAACACTTCCTTCTGATACTCAACAAGTTTGATCTGCTCGAAGAAAAGATTGACCAAGTCTCTCTCACTCGATGCGAATGGTTTAATGACTTCAATCCAGCAACCAGTCATAATCCCAACAGTAGTAATAATAACAGTAATAATCCTACACTGGCTCATCGAGCCTTTCAGTATATTGCAATGAAGTTCAAAAGACTATTTCATACCCAAACAGATAGAAAGTTGTTTGTCTCCCAAGTTACTGCATTAGAGCCTGATACTGTAGATGAAGCTCTCAGATATGCTAGTGAGATTCTAAGATGTGAGGAAGAGGTACCCAGATTAATTAATGAGTTCTCTTCGGCTAGCATTGATGCCAGTTCTACAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006996 GO:0007033 GO:0008150 GO:0009705 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0023051 GO:0023057 GO:0031090 GO:0031224 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0065007 GO:0071840 GO:0098588 GO:0098805 GO:0098876 GO:1900457 GO:1900458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Solute_trans_a

Protein Analysis

877

Amino Acids

98.1

Weight (kDa)

5.14

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	475 - 851	4.4e-63	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77220
fragaria_vesca	FvH4_2g14580 FvH4_2g14580 FvH4_2g14580 FvH4_2g14580 FvH4_2g14580 FvH4_2g14580 FvH4_2g14580 FvH4_2g14580
malus_domestica	MD05G1016800.v1.1 MD10G1016600.v1.1
prunus_persica	Prupe.8G020400_v2.0.a1 Prupe.8G020400_v2.0.a1 Prupe.8G020400_v2.0.a1
pyrus_communis	pycom05g00950 pycom10g01090
rosa_chinensis	RchiOBHm_Chr6g0277041
rosa_laevigata	RLG00000013343
rosa_multiflora	Rmu_sc0000206.1_g000009
rosa_roxburghii	Rroxscaffold_7G00191750
rosa_rugosa	Rorug06G0105600 Rorug06G0105700
rosa_samantha	Rh6AG215700 Rh6BG220400 Rh6CG223200 Rh6DG212800
rosa_wichuraiana	Rw6G018830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1097
Acc65I	GGTACC	1 cut(s)	2575
AccB1I	GGYRCC	1 cut(s)	2575
AccI	GTMKAC	2 cut(s)	1567, 1688
AccII	CGCG	2 cut(s)	89, 558
AccIII	TCCGGA	1 cut(s)	562
AciI	CCGC	6 cut(s)	11, 89, 311, 865, 1382, 1772
AclWI	GGATC	7 cut(s)	442, 554, 1039, 1257, 1270, 1531, 1811
AcsI	RAATTY	2 cut(s)	1905, 1991
AcuI	CTGAAG	1 cut(s)	1635
AdeI	CACNNNGTG	1 cut(s)	529
AfaI	GTAC	5 cut(s)	1333, 1553, 1750, 1949, 2577
AfiI	CCNNNNNNNGG	4 cut(s)	134, 612, 1129, 1229
AjnI	CCWGG	3 cut(s)	934, 1027, 1642
AloI	GAACNNNNNNTCC	2 cut(s)	581, 613
Alw21I	GWGCWC	3 cut(s)	362, 458, 984
Alw26I	GTCTC	4 cut(s)	1347, 1696, 2326, 2497
AlwI	GGATC	7 cut(s)	442, 554, 1039, 1257, 1270, 1531, 1811
AlwNI	CAGNNNCTG	1 cut(s)	446
Ama87I	CYCGRG	1 cut(s)	1699
Aor13HI	TCCGGA	1 cut(s)	562
AoxI	GGCC	6 cut(s)	273, 536, 635, 1082, 1120, 1696
ApeKI	GCWGC	7 cut(s)	5, 8, 32, 188, 229, 1204, 2221
ApoI	RAATTY	2 cut(s)	1905, 1991
ArsI	GACNNNNNNTTYG	2 cut(s)	1179, 1211
AseI	ATTAAT	2 cut(s)	2585, 2589
Asp700I	GAANNNNTTC	3 cut(s)	466, 695, 2267
Asp718I	GGTACC	1 cut(s)	2575
AspLEI	GCGC	4 cut(s)	89, 211, 883, 1518
AspS9I	GGNCC	5 cut(s)	125, 1120, 1646, 1697, 1914
AsuII	TTCGAA	1 cut(s)	569
AsuNHI	GCTAGC	1 cut(s)	2606
AvaI	CYCGRG	1 cut(s)	1699
AvaII	GGWCC	3 cut(s)	125, 1646, 1914
BamHI	GGATCC	1 cut(s)	1262
BanI	GGYRCC	1 cut(s)	2575
BanII	GRGCYC	4 cut(s)	362, 458, 984, 1929
BauI	CACGAG	1 cut(s)	1779
BbsI	GAAGAC	3 cut(s)	840, 1189, 1395
Bbv12I	GWGCWC	3 cut(s)	362, 458, 984
BbvCI	CCTCAGC	1 cut(s)	755
BbvI	GCAGC	5 cut(s)	19, 175, 216, 1191, 2233
BccI	CCATC	6 cut(s)	407, 547, 605, 1204, 1253, 2203
BciT130I	CCWGG	3 cut(s)	936, 1029, 1644
BciVI	GTATCC	1 cut(s)	2203
BclI	TGATCA	2 cut(s)	1179, 2257
BcoDI	GTCTC	4 cut(s)	1347, 1696, 2326, 2497
BfaI	CTAG	7 cut(s)	852, 987, 1140, 2004, 2184, 2547, 2607
BfmI	CTRYAG	4 cut(s)	1205, 1899, 2523, 2625
BfoI	RGCGCY	2 cut(s)	212, 1519
BfuI	GTATCC	1 cut(s)	2203
BisI	GCNGC	9 cut(s)	6, 9, 33, 189, 230, 866, 1205, 1773, 2222
BlsI	GCNGC	9 cut(s)	7, 10, 34, 190, 231, 867, 1206, 1774, 2223
Bme1390I	CCNGG	3 cut(s)	936, 1029, 1644
Bme18I	GGWCC	3 cut(s)	125, 1646, 1914
BmeT110I	CYCGRG	1 cut(s)	1699
BmgT120I	GGNCC	5 cut(s)	125, 1120, 1646, 1697, 1914
BmiI	GGNNCC	3 cut(s)	1121, 1264, 2577
BmrFI	CCNGG	3 cut(s)	936, 1029, 1644
BmrI	ACTGGG	1 cut(s)	1255
BmsI	GCATC	4 cut(s)	846, 2170, 2324, 2605
BmtI	GCTAGC	1 cut(s)	2610
BmuI	ACTGGG	1 cut(s)	1255
BpiI	GAAGAC	3 cut(s)	840, 1189, 1395
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
BpmI	CTGGAG	1 cut(s)	2129
Bpu10I	CCTNAGC	1 cut(s)	755
Bpu14I	TTCGAA	1 cut(s)	569
BpuEI	CTTGAG	3 cut(s)	442, 1441, 1595
Bsa29I	ATCGAT	1 cut(s)	676
BsaJI	CCNNGG	3 cut(s)	638, 1986, 2086
BsaWI	WCCGGW	4 cut(s)	130, 193, 562, 1842
BsaXI	ACNNNNNCTCC	6 cut(s)	175, 205, 349, 379, 1357, 1387
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 612, 1129, 1229
Bse118I	RCCGGY	1 cut(s)	205
Bse1I	ACTGG	5 cut(s)	258, 1250, 2367, 2418, 2619
Bse3DI	GCAATG	3 cut(s)	246, 768, 2448
BseAI	TCCGGA	1 cut(s)	562
BseBI	CCWGG	3 cut(s)	936, 1029, 1644
BseCI	ATCGAT	1 cut(s)	676
BseDI	CCNNGG	3 cut(s)	638, 1986, 2086
BseGI	GGATG	7 cut(s)	237, 304, 418, 514, 622, 861, 2245
BseLI	CCNNNNNNNGG	4 cut(s)	134, 612, 1129, 1229
BseMI	GCAATG	3 cut(s)	246, 768, 2448
BseMII	CTCAG	7 cut(s)	17, 465, 693, 746, 897, 1944, 2551
BseNI	ACTGG	5 cut(s)	258, 1250, 2367, 2418, 2619
BseRI	GAGGAG	2 cut(s)	1365, 1817
BseXI	GCAGC	5 cut(s)	19, 175, 216, 1191, 2233
BseYI	CCCAGC	1 cut(s)	1104
BsgI	GTGCAG	2 cut(s)	605, 1275
Bsh1236I	CGCG	2 cut(s)	89, 558
BshFI	GGCC	6 cut(s)	275, 538, 637, 1084, 1122, 1698
BshNI	GGYRCC	1 cut(s)	2575
BshVI	ATCGAT	1 cut(s)	676
BsiHKAI	GWGCWC	3 cut(s)	362, 458, 984
BsiHKCI	CYCGRG	1 cut(s)	1699
BsiSI	CCGG	7 cut(s)	131, 194, 206, 563, 776, 1843, 2249
BslFI	GGGAC	2 cut(s)	1163, 1322
BslI	CCNNNNNNNGG	4 cut(s)	134, 612, 1129, 1229
BsmAI	GTCTC	4 cut(s)	1347, 1696, 2326, 2497
BsmFI	GGGAC	2 cut(s)	1163, 1322
BsmI	GAATGC	1 cut(s)	801
BsnI	GGCC	6 cut(s)	275, 538, 637, 1084, 1122, 1698
BsoBI	CYCGRG	1 cut(s)	1699
Bsp119I	TTCGAA	1 cut(s)	569
Bsp1286I	GDGCHC	4 cut(s)	362, 458, 984, 1929
Bsp13I	TCCGGA	1 cut(s)	562
Bsp1407I	TGTACA	1 cut(s)	1551
Bsp19I	CCATGG	1 cut(s)	1986
Bsp68I	TCGCGA	1 cut(s)	558
BspACI	CCGC	6 cut(s)	11, 89, 311, 865, 1382, 1772
BspANI	GGCC	6 cut(s)	275, 538, 637, 1084, 1122, 1698
BspCNI	CTCAG	7 cut(s)	18, 466, 694, 747, 898, 1943, 2550
BspDI	ATCGAT	1 cut(s)	676
BspEI	TCCGGA	1 cut(s)	562
BspFNI	CGCG	2 cut(s)	89, 558
BspHI	TCATGA	2 cut(s)	897, 1533
BspLI	GGNNCC	3 cut(s)	1121, 1264, 2577
BspMAI	CTGCAG	1 cut(s)	1209
BspOI	GCTAGC	1 cut(s)	2610
BspPI	GGATC	7 cut(s)	442, 554, 1039, 1257, 1270, 1531, 1811
BspQI	GCTCTTC	1 cut(s)	972
BspT104I	TTCGAA	1 cut(s)	569
BspT107I	GGYRCC	1 cut(s)	2575
BsrDI	GCAATG	3 cut(s)	246, 768, 2448
BsrFI	RCCGGY	1 cut(s)	205
BsrGI	TGTACA	1 cut(s)	1551
BsrI	ACTGG	5 cut(s)	258, 1250, 2367, 2418, 2619
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	3 cut(s)	638, 1986, 2086
BssNAI	GTATAC	2 cut(s)	1568, 1689
BssSI	CACGAG	1 cut(s)	1779
BssT1I	CCWWGG	2 cut(s)	1986, 2086
Bst1107I	GTATAC	2 cut(s)	1568, 1689
Bst2BI	CACGAG	1 cut(s)	1779
Bst2UI	CCWGG	3 cut(s)	936, 1029, 1644
Bst4CI	ACNGT	8 cut(s)	547, 1556, 1676, 1794, 2384, 2399, 2524, 2629
Bst6I	CTCTTC	6 cut(s)	324, 972, 1269, 1401, 2565, 2605
BstAUI	TGTACA	1 cut(s)	1551
BstBI	TTCGAA	1 cut(s)	569
BstC8I	GCNNGC	2 cut(s)	1667, 2608
BstDEI	CTNAG	9 cut(s)	26, 474, 702, 755, 876, 906, 1930, 2537, 2558
BstDSI	CCRYGG	1 cut(s)	1986
BstF5I	GGATG	7 cut(s)	237, 304, 418, 514, 622, 861, 2245
BstFNI	CGCG	2 cut(s)	89, 558
BstH2I	RGCGCY	2 cut(s)	212, 1519
BstHHI	GCGC	4 cut(s)	89, 211, 883, 1518
BstMAI	GTCTC	4 cut(s)	1347, 1696, 2326, 2497
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 634, 865, 1579, 1829, 2423
BstNI	CCWGG	3 cut(s)	936, 1029, 1644
BstNSI	RCATGY	1 cut(s)	155
BstSCI	CCNGG	3 cut(s)	934, 1027, 1642
BstSFI	CTRYAG	4 cut(s)	1205, 1899, 2523, 2625
BstUI	CGCG	2 cut(s)	89, 558
BstV1I	GCAGC	5 cut(s)	19, 175, 216, 1191, 2233
BstV2I	GAAGAC	3 cut(s)	840, 1189, 1395
BstX2I	RGATCY	2 cut(s)	1031, 1262
BstYI	RGATCY	2 cut(s)	1031, 1262
BstZ17I	GTATAC	2 cut(s)	1568, 1689
Bsu15I	ATCGAT	1 cut(s)	676
BsuI	GTATCC	1 cut(s)	2203
BsuRI	GGCC	6 cut(s)	275, 538, 637, 1084, 1122, 1698
BsuTUI	ATCGAT	1 cut(s)	676
BtgI	CCRYGG	1 cut(s)	1986
BtsCI	GGATG	7 cut(s)	237, 304, 418, 514, 622, 861, 2245
BtsI	GCAGTG	1 cut(s)	117
BtsIMutI	CAGTG	3 cut(s)	117, 699, 2411
BtuMI	TCGCGA	1 cut(s)	558
Cac8I	GCNNGC	2 cut(s)	1667, 2608
CaiI	CAGNNNCTG	1 cut(s)	446
CciI	TCATGA	2 cut(s)	897, 1533
CfoI	GCGC	4 cut(s)	89, 211, 883, 1518
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	5 cut(s)	125, 1120, 1646, 1697, 1914
ClaI	ATCGAT	1 cut(s)	676
CsiI	ACCWGGT	1 cut(s)	1642
Csp6I	GTAC	5 cut(s)	1332, 1552, 1749, 1948, 2576
CviQI	GTAC	5 cut(s)	1332, 1552, 1749, 1948, 2576
DdeI	CTNAG	9 cut(s)	26, 474, 702, 755, 876, 906, 1930, 2537, 2558
DraI	TTTAAA	2 cut(s)	1128, 1471
DraIII	CACNNNGTG	1 cut(s)	529
Eam1104I	CTCTTC	6 cut(s)	324, 972, 1269, 1401, 2565, 2605
EarI	CTCTTC	6 cut(s)	324, 972, 1269, 1401, 2565, 2605
Ecl136II	GAGCTC	3 cut(s)	360, 456, 982
Eco130I	CCWWGG	2 cut(s)	1986, 2086
Eco147I	AGGCCT	1 cut(s)	1084
Eco24I	GRGCYC	4 cut(s)	362, 458, 984, 1929
Eco32I	GATATC	2 cut(s)	912, 1743
Eco47I	GGWCC	3 cut(s)	125, 1646, 1914
Eco53kI	GAGCTC	3 cut(s)	360, 456, 982
Eco57I	CTGAAG	1 cut(s)	1635
Eco88I	CYCGRG	1 cut(s)	1699
EcoICRI	GAGCTC	3 cut(s)	360, 456, 982
EcoO109I	RGGNCCY	1 cut(s)	125
EcoRII	CCWGG	3 cut(s)	934, 1027, 1642
EcoRV	GATATC	2 cut(s)	912, 1743
EcoT14I	CCWWGG	2 cut(s)	1986, 2086
EcoT38I	GRGCYC	4 cut(s)	362, 458, 984, 1929
ErhI	CCWWGG	2 cut(s)	1986, 2086
FalI	AAGNNNNNCTT	4 cut(s)	725, 757, 1614, 1646
FaqI	GGGAC	2 cut(s)	1163, 1322
FbaI	TGATCA	2 cut(s)	1179, 2257
FblI	GTMKAC	2 cut(s)	1567, 1688
Fnu4HI	GCNGC	9 cut(s)	6, 9, 33, 189, 230, 866, 1205, 1773, 2222
FokI	GGATG	7 cut(s)	224, 311, 425, 521, 629, 868, 2232
FriOI	GRGCYC	4 cut(s)	362, 458, 984, 1929
Fsp4HI	GCNGC	9 cut(s)	6, 9, 33, 189, 230, 866, 1205, 1773, 2222
FspBI	CTAG	7 cut(s)	852, 987, 1140, 2004, 2184, 2547, 2607
GlaI	GCGC	4 cut(s)	88, 210, 882, 1517
GluI	GCNGC	9 cut(s)	6, 9, 33, 189, 230, 866, 1205, 1773, 2222
GsaI	CCCAGC	1 cut(s)	1108
GsuI	CTGGAG	1 cut(s)	2129
HaeII	RGCGCY	2 cut(s)	212, 1519
HaeIII	GGCC	6 cut(s)	275, 538, 637, 1084, 1122, 1698
HapII	CCGG	7 cut(s)	131, 194, 206, 563, 776, 1843, 2249
HhaI	GCGC	4 cut(s)	89, 211, 883, 1518
Hin6I	GCGC	4 cut(s)	87, 209, 881, 1516
HinP1I	GCGC	4 cut(s)	87, 209, 881, 1516
HinfI	GANTC	7 cut(s)	177, 284, 320, 443, 566, 2030, 2554
HpaII	CCGG	7 cut(s)	131, 194, 206, 563, 776, 1843, 2249
Hpy166II	GTNNAC	4 cut(s)	699, 955, 1568, 1689
Hpy8I	GTNNAC	4 cut(s)	699, 955, 1568, 1689
Hpy99I	CGWCG	1 cut(s)	962
HpyCH4III	ACNGT	8 cut(s)	547, 1556, 1676, 1794, 2384, 2399, 2524, 2629
HpyCH4IV	ACGT	3 cut(s)	1290, 1685, 2017
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 634, 865, 1579, 1829, 2423
HpyF3I	CTNAG	9 cut(s)	26, 474, 702, 755, 876, 906, 1930, 2537, 2558
HpySE526I	ACGT	3 cut(s)	1290, 1685, 2017
HspAI	GCGC	4 cut(s)	87, 209, 881, 1516
Kpn2I	TCCGGA	1 cut(s)	562
KpnI	GGTACC	1 cut(s)	2579
Ksp22I	TGATCA	2 cut(s)	1179, 2257
LguI	GCTCTTC	1 cut(s)	972
LmnI	GCTCC	2 cut(s)	196, 357
Lsp1109I	GCAGC	5 cut(s)	19, 175, 216, 1191, 2233
LweI	GCATC	4 cut(s)	846, 2170, 2324, 2605
MabI	ACCWGGT	1 cut(s)	1642
MaeI	CTAG	7 cut(s)	852, 987, 1140, 2004, 2184, 2547, 2607
MaeII	ACGT	3 cut(s)	1290, 1685, 2017
MaeIII	GTNAC	4 cut(s)	71, 547, 793, 2500
MflI	RGATCY	2 cut(s)	1031, 1262
MhlI	GDGCHC	4 cut(s)	362, 458, 984, 1929
MlyI	GAGTC	3 cut(s)	293, 452, 2024
MmeI	TCCRAC	3 cut(s)	75, 366, 1995
MroI	TCCGGA	1 cut(s)	562
MroXI	GAANNNNTTC	3 cut(s)	466, 695, 2267
MslI	CAYNNNNRTG	2 cut(s)	581, 2075
MspA1I	CMGCKG	3 cut(s)	1108, 1669, 2224
MspI	CCGG	7 cut(s)	131, 194, 206, 563, 776, 1843, 2249
MspR9I	CCNGG	3 cut(s)	936, 1029, 1644
Mva1269I	GAATGC	1 cut(s)	801
MvaI	CCWGG	3 cut(s)	936, 1029, 1644
MvnI	CGCG	2 cut(s)	89, 558
MwoI	GCNNNNNNNGC	6 cut(s)	38, 634, 865, 1579, 1829, 2423
NcoI	CCATGG	1 cut(s)	1986
NheI	GCTAGC	1 cut(s)	2606
NlaIV	GGNNCC	3 cut(s)	1121, 1264, 2577
NmeAIII	GCCGAG	1 cut(s)	663
NmuCI	GTSAC	1 cut(s)	547
NruI	TCGCGA	1 cut(s)	558
NspI	RCATGY	1 cut(s)	155
NspV	TTCGAA	1 cut(s)	569
PacI	TTAATTAA	1 cut(s)	2589
PagI	TCATGA	2 cut(s)	897, 1533
PceI	AGGCCT	1 cut(s)	1084
PciSI	GCTCTTC	1 cut(s)	972
PcsI	WCGNNNNNNNCGW	2 cut(s)	72, 957
PctI	GAATGC	1 cut(s)	801
PdmI	GAANNNNTTC	3 cut(s)	466, 695, 2267
PfeI	GAWTC	4 cut(s)	177, 320, 566, 2554
PflFI	GACNNNGTC	1 cut(s)	2318
PkrI	GCNGC	9 cut(s)	7, 10, 34, 190, 231, 867, 1206, 1774, 2223
PleI	GAGTC	3 cut(s)	292, 451, 2024
PpsI	GAGTC	3 cut(s)	292, 451, 2024
PpuMI	RGGWCCY	1 cut(s)	125
PshBI	ATTAAT	2 cut(s)	2585, 2589
PsiI	TTATAA	1 cut(s)	1097
Psp124BI	GAGCTC	3 cut(s)	362, 458, 984
Psp5II	RGGWCCY	1 cut(s)	125
Psp6I	CCWGG	3 cut(s)	934, 1027, 1642
PspFI	CCCAGC	1 cut(s)	1104
PspGI	CCWGG	3 cut(s)	934, 1027, 1642
PspN4I	GGNNCC	3 cut(s)	1121, 1264, 2577
PspPI	GGNCC	5 cut(s)	125, 1120, 1646, 1697, 1914
PspPPI	RGGWCCY	1 cut(s)	125
PsrI	GAACNNNNNNTAC	2 cut(s)	297, 329
PstI	CTGCAG	1 cut(s)	1209
PstNI	CAGNNNCTG	1 cut(s)	446
PsuI	RGATCY	2 cut(s)	1031, 1262
PsyI	GACNNNGTC	1 cut(s)	2318
PvuII	CAGCTG	3 cut(s)	1108, 1669, 2224
RruI	TCGCGA	1 cut(s)	558
RsaI	GTAC	5 cut(s)	1333, 1553, 1750, 1949, 2577
RsaNI	GTAC	5 cut(s)	1332, 1552, 1749, 1948, 2576
RseI	CAYNNNNRTG	2 cut(s)	581, 2075
SacI	GAGCTC	3 cut(s)	362, 458, 984
SapI	GCTCTTC	1 cut(s)	972
SatI	GCNGC	9 cut(s)	6, 9, 33, 189, 230, 866, 1205, 1773, 2222
Sau96I	GGNCC	5 cut(s)	125, 1120, 1646, 1697, 1914
SchI	GAGTC	3 cut(s)	293, 452, 2024
ScrFI	CCNGG	3 cut(s)	936, 1029, 1644
SduI	GDGCHC	4 cut(s)	362, 458, 984, 1929
SexAI	ACCWGGT	1 cut(s)	1642
SfaNI	GCATC	4 cut(s)	846, 2170, 2324, 2605
SfcI	CTRYAG	4 cut(s)	1205, 1899, 2523, 2625
SfuI	TTCGAA	1 cut(s)	569
SgrAI	CRCCGGYG	1 cut(s)	205
SinI	GGWCC	3 cut(s)	125, 1646, 1914
SmiMI	CAYNNNNRTG	2 cut(s)	581, 2075
SmlI	CTYRAG	3 cut(s)	457, 1456, 1574
SmoI	CTYRAG	3 cut(s)	457, 1456, 1574
SseBI	AGGCCT	1 cut(s)	1084
SsiI	CCGC	6 cut(s)	11, 89, 311, 865, 1382, 1772
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	7 cut(s)	852, 987, 1140, 2004, 2184, 2547, 2607
SstI	GAGCTC	3 cut(s)	362, 458, 984
StuI	AGGCCT	1 cut(s)	1084
StyD4I	CCNGG	3 cut(s)	934, 1027, 1642
StyI	CCWWGG	2 cut(s)	1986, 2086
TaaI	ACNGT	8 cut(s)	547, 1556, 1676, 1794, 2384, 2399, 2524, 2629
TaiI	ACGT	3 cut(s)	1293, 1688, 2020
TaqI	TCGA	8 cut(s)	66, 569, 676, 1174, 1633, 2301, 2332, 2422
TaqII	GACCGA	1 cut(s)	1931
TatI	WGTACW	2 cut(s)	1331, 1551
TauI	GCSGC	2 cut(s)	868, 1775
TfiI	GAWTC	4 cut(s)	177, 320, 566, 2554
TscAI	CASTG	3 cut(s)	117, 706, 2418
TseFI	GTSAC	1 cut(s)	547
TseI	GCWGC	7 cut(s)	5, 8, 32, 188, 229, 1204, 2221
Tsp45I	GTSAC	1 cut(s)	547
TspRI	CASTG	3 cut(s)	117, 706, 2418
Tth111I	GACNNNGTC	1 cut(s)	2318
VpaK11BI	GGWCC	3 cut(s)	125, 1646, 1914
VspI	ATTAAT	2 cut(s)	2585, 2589
XapI	RAATTY	2 cut(s)	1905, 1991
XbaI	TCTAGA	1 cut(s)	986
XceI	RCATGY	1 cut(s)	155
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1035, 1112
XmiI	GTMKAC	2 cut(s)	1567, 1688
XmnI	GAANNNNTTC	3 cut(s)	466, 695, 2267
XspI	CTAG	7 cut(s)	852, 987, 1140, 2004, 2184, 2547, 2607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.