Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0012926

Physical Location & Seq

Genomic Coordinates Forward (+)

16752563 .. 16756438

Gene Structure 3876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0121700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGAATTCCTTTGTGCTTTTTCAGTCCTCTTTGATTCCTTTGCTTTTGATCACTTCCTTTCTGTCGATCAATTTTCAATCAAGTGTGTGCGCCGATGATGCAGTGGAATATGCCAACTGCAGCCAACCTATTACCTGCGGGGGTGTCAAAAGCAAAGTCTCTTATCCCTTTCGGGGAGCGAACCGAGCTGATTACTGTGGCAAATCTGGGTTTGACGTCACATGCGAAGCCAACGTCCCAATGATCACCATGGAGAATATCAAGTTCAGAATTCTTGACATGACTACAACAACTCCTACTGTAAAAGTTGCTAGGCAGGATTACTGGGAAACTATCTGTCCGCCGACATATGTTTCCACAAACCTCAACTTCTCTCTCTTCACTTACTCTTCTGGGCTTCTGAACGTGTCCTTTTGGTACGGATGCAATACAACCTTTTCAGTCTTAGGTAATTCGCATGAATGCAACAGTAGCGTCACTGCTTCCTATCTCACACAGAGGGGAGCTAGTAGTCTCCCATCTGATCCAGTTAGTACGGGCGCCTGTGATTATAAGGTTTTGGTTCCGGTATTTGCATCCGCTTCTGCGGATCTGGACAGCAATGCTACAGATATTGAGACTGCGATAGATGGTGGTTTTGATTTGGATGTGCTAAATGCTGATACTGACCTCTGCAACAGTTGCTTGTCATCAGGGGGAGTTTGTGGGCAAAACATGACTACTGTTGCCAACGAATTCAAGTGCTTTTGCCAGACTACTACATCTTCGACAACCACATGTACTGAAAGCTCTTCACAATCTCCAAATCCAGCTCCATCCAATTCAGCTTTTAAGCTTAGACTAGATGGTCTGGTCGATCGAGGTTTAGGTAAAGTGCCAATCGTTCGAGTGTGCAAGTATAGGGAGCATCGGTTACCCTTTCTGGGGATCAAACCGACCCGATTACTGTGGCTCCCGGAGTTCAAGTTGAACTGCAGCGGCGACGCCCCGTCTATCTTGATCCAGGAACAAGAGTTTCGAGTCCTTTCTATCAATCAGAGTCAAAGCAGTTTCACAATTGCTAGAGCCGATTACTGGAACAATGTTTGTCCGGTGTCCCTTACCAATACCACCTCACATGATATTTATAGTATTGACCGCTGTGAATCAATTTGCTTAAATGATTGCCATTGCACTGCTTATGGTTATAGCAGCTCTTCTTCTGAATGTTCAACTTGGAAAGGAGATCTGTGGGCGGATGAAAATGGAAGAACTTTACATTTTAGACTAGCAGCTTCTGATTATAAGAATCTAAAAAGTAGAAAGCGAACCATTGTAATCGCAACAGTCTCAGCTACAGCAGGTTTGCTTGCTATAGTTTTTGGCTATTTTTTATGGAAGAAAACACTGGGAAAGAGAAGTGAAACTATAAAGTATCTTAGTGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATCCAGTTTGAGGAGTATATTAGTAGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGGCTATCAAAGAAGTCCGGACAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTTAGACTCTTGGGTTGTTGCACTGAAGCACAGGAAATGATGTTGATTTATGAGTACATGCCCAATCGAAGTTTGGACAAATTTCTGTTTGATCCATCCGAAAAGACAAAATTGGACTGGGATAGACGTTTAAGAATTATAGAAGGTATAGCTCAAGGATTGCTTTATATACACAAGTACTCAAGATTAAAAATCATTCACAGGGATCTAAAAGCAAGTAATATTCTATTGGATGGAACAATGAACCCCAAGATTTCTGACTTTGGAATGGCAAAGATTTTTGACCTAAATCAAACTGAAGCAAATACTAACAGGGTTGTTGGGACCTACGGCTACATGTCACCTGAGTATGCACGTTATGGTCATTTCTCTGAGAAATCGGATGTTTTTAGTTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAGAAAAATGCTAGTTTCTATCGTTTTGAACGTTCACTGACTCTCGCTGGATGGGCATGGGACCTATGGAAAGAAGGAAGGGGAATAGAGGTGATTGATGCGTCAATAAGGGAAACATTACAGGCTCATGAGGCTTTAAGGTGTATCAATATAGGACTTTTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCGTCAGTAATTCACATGTTGCAGGGAAATGAAGCTGCCTCTCTTCCACCTACCAAAGCACCTGCCTTTTCAACACAGACGAATTTCAGTACTATTGGTCCTTCTTCTCAAACACCTACCAATTATTCAAACAATGCACTCACGATTAGTTTGCCCGAAGCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006457 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006950 GO:0006986 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0030150 GO:0031647 GO:0031974 GO:0033036 GO:0033365 GO:0034613 GO:0035966 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050821 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0065007 GO:0065008 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-DNL

Protein Analysis

818

Amino Acids

90.22

Weight (kDa)

6.45

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	40 - 105	6.2e-12	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	166 - 251	4.4e-11	Wall-associated receptor kinase C-terminal
PAN_2	PF08276	363 - 410	2.4e-07	PAN-like domain
Pkinase	PF00069	500 - 699	2e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	502 - 769	1.4e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27280
fragaria_vesca	FvH4_2g15740
malus_domestica	MD05G1126400.v1.1 MD10G1129200.v1.1
prunus_persica	Prupe.8G169800_v2.0.a1
pyrus_communis	pycom05g12220 pycom10g11080
rosa_chinensis	RchiOBHm_Chr6g0279051
rosa_laevigata	RLG00000013170
rosa_multiflora	Rmu_sc0002080.1_g000007
rosa_roxburghii	Rroxscaffold_7G00189180
rosa_rugosa	Rorug06G0121700
rosa_samantha	Rh6AG230700 Rh6BG235500 Rh6CG237500
rosa_wichuraiana	Rw0G017040 Rw0G021120 Rw6G020190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	552, 1284, 1542
AarI	CACCTGC	1 cut(s)	2359
AasI	GACNNNNNNGTC	1 cut(s)	846
AatII	GACGTC	1 cut(s)	219
Acc36I	ACCTGC	4 cut(s)	143, 1331, 2290, 2359
AccB1I	GGYRCC	1 cut(s)	539
AccIII	TCCGGA	1 cut(s)	1598
AciI	CCGC	7 cut(s)	138, 341, 579, 587, 978, 1138, 1235
AclI	AACGTT	1 cut(s)	2122
AclWI	GGATC	6 cut(s)	518, 597, 935, 994, 1751, 1878
AcsI	RAATTY	5 cut(s)	4, 270, 734, 1745, 2371
AcuI	CTGAAG	3 cut(s)	1521, 1710, 1983
AcyI	GRCGYC	4 cut(s)	216, 540, 984, 2291
AfaI	GTAC	6 cut(s)	419, 535, 781, 1721, 1844, 2380
AfiI	CCNNNNNNNGG	6 cut(s)	173, 923, 924, 1074, 1467, 1581
AflIII	ACRYGT	4 cut(s)	405, 776, 2001, 2304
AgsI	TTSAA	9 cut(s)	77, 739, 964, 970, 1212, 2120, 2261, 2361, 2418
AhdI	GACNNNNNGTC	1 cut(s)	988
AjnI	CCWGG	1 cut(s)	1002
Alw26I	GTCTC	4 cut(s)	163, 518, 611, 1333
AlwI	GGATC	6 cut(s)	518, 597, 935, 994, 1751, 1878
AlwNI	CAGNNNCTG	1 cut(s)	1277
Aor13HI	TCCGGA	1 cut(s)	1598
AoxI	GGCC	1 cut(s)	1531
ApeKI	GCWGC	7 cut(s)	120, 975, 1191, 1271, 1424, 2270, 2324
ApoI	RAATTY	5 cut(s)	4, 270, 734, 1745, 2371
ArsI	GACNNNNNNTTYG	4 cut(s)	141, 173, 219, 251
AspLEI	GCGC	2 cut(s)	92, 542
AspS9I	GGNCC	4 cut(s)	1532, 1989, 2152, 2387
AsuC2I	CCSGG	1 cut(s)	956
AsuHPI	GGTGA	3 cut(s)	238, 1998, 2194
AvaII	GGWCC	3 cut(s)	1989, 2152, 2387
BanI	GGYRCC	1 cut(s)	539
BbvI	GCAGC	7 cut(s)	132, 987, 1203, 1283, 1411, 2282, 2311
BccI	CCATC	7 cut(s)	526, 623, 823, 839, 1768, 1892, 2136
BceAI	ACGGC	1 cut(s)	2011
BcgI	CGANNNNNNTGC	2 cut(s)	2422, 2456
BciT130I	CCWGG	1 cut(s)	1004
BclI	TGATCA	2 cut(s)	48, 243
BcnI	CCSGG	1 cut(s)	956
BcoDI	GTCTC	4 cut(s)	163, 518, 611, 1333
BfaI	CTAG	7 cut(s)	312, 507, 842, 1062, 1268, 1514, 2103
BfmI	CTRYAG	6 cut(s)	118, 606, 973, 1335, 1353, 2268
BfoI	RGCGCY	1 cut(s)	543
BfuAI	ACCTGC	4 cut(s)	143, 1331, 2290, 2359
BglII	AGATCT	1 cut(s)	1225
BisI	GCNGC	8 cut(s)	121, 976, 979, 1192, 1272, 1425, 2271, 2325
BlsI	GCNGC	8 cut(s)	122, 977, 980, 1193, 1273, 1426, 2272, 2326
BmcAI	AGTACT	2 cut(s)	1844, 2380
Bme1390I	CCNGG	2 cut(s)	956, 1004
Bme18I	GGWCC	3 cut(s)	1989, 2152, 2387
BmeRI	GACNNNNNGTC	1 cut(s)	988
BmgT120I	GGNCC	4 cut(s)	1532, 1989, 2152, 2387
BmiI	GGNNCC	5 cut(s)	541, 564, 953, 1990, 2153
BmrFI	CCNGG	2 cut(s)	956, 1004
BmrI	ACTGGG	3 cut(s)	334, 1397, 1792
BmsI	GCATC	5 cut(s)	88, 413, 584, 916, 2179
BmuI	ACTGGG	3 cut(s)	334, 1397, 1792
BpuEI	CTTGAG	2 cut(s)	1803, 1831
BpuMI	CCSGG	1 cut(s)	956
BsaHI	GRCGYC	4 cut(s)	216, 540, 984, 2291
BsaJI	CCNNGG	1 cut(s)	249
BsaWI	WCCGGW	3 cut(s)	565, 1090, 1598
BsaXI	ACNNNNNCTCC	8 cut(s)	277, 307, 896, 926, 936, 950, 966, 980
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 923, 924, 1074, 1467, 1581
Bse1I	ACTGG	6 cut(s)	329, 527, 1079, 1392, 1461, 1787
Bse3DI	GCAATG	3 cut(s)	607, 1168, 2292
BseAI	TCCGGA	1 cut(s)	1598
BseBI	CCWGG	1 cut(s)	1004
BseDI	CCNNGG	1 cut(s)	249
BseGI	GGATG	9 cut(s)	428, 575, 652, 815, 1243, 1760, 1903, 2053, 2147
BseLI	CCNNNNNNNGG	6 cut(s)	173, 923, 924, 1074, 1467, 1581
BseMI	GCAATG	3 cut(s)	607, 1168, 2292
BseMII	CTCAG	3 cut(s)	1344, 2001, 2028
BseNI	ACTGG	6 cut(s)	329, 527, 1079, 1392, 1461, 1787
BseRI	GAGGAG	1 cut(s)	1483
BseXI	GCAGC	7 cut(s)	132, 987, 1203, 1283, 1411, 2282, 2311
Bsh1285I	CGRYCG	1 cut(s)	859
BshFI	GGCC	1 cut(s)	1533
BshNI	GGYRCC	1 cut(s)	539
BsiEI	CGRYCG	1 cut(s)	859
BsiSI	CCGG	4 cut(s)	566, 956, 1091, 1599
BslFI	GGGAC	4 cut(s)	221, 1081, 2002, 2165
BslI	CCNNNNNNNGG	6 cut(s)	173, 923, 924, 1074, 1467, 1581
BsmAI	GTCTC	4 cut(s)	163, 518, 611, 1333
BsmFI	GGGAC	4 cut(s)	221, 1081, 2002, 2165
BsmI	GAATGC	1 cut(s)	467
BsnI	GGCC	1 cut(s)	1533
Bsp13I	TCCGGA	1 cut(s)	1598
Bsp19I	CCATGG	1 cut(s)	249
BspACI	CCGC	7 cut(s)	138, 341, 579, 587, 978, 1138, 1235
BspANI	GGCC	1 cut(s)	1533
BspCNI	CTCAG	3 cut(s)	1343, 2002, 2029
BspEI	TCCGGA	1 cut(s)	1598
BspHI	TCATGA	2 cut(s)	1620, 2218
BspLI	GGNNCC	5 cut(s)	541, 564, 953, 1990, 2153
BspMAI	CTGCAG	3 cut(s)	122, 977, 2272
BspMI	ACCTGC	4 cut(s)	143, 1331, 2290, 2359
BspPI	GGATC	6 cut(s)	518, 597, 935, 994, 1751, 1878
BspQI	GCTCTTC	2 cut(s)	796, 1201
BspT107I	GGYRCC	1 cut(s)	539
BsrDI	GCAATG	3 cut(s)	607, 1168, 2292
BsrI	ACTGG	6 cut(s)	329, 527, 1079, 1392, 1461, 1787
BssECI	CCNNGG	1 cut(s)	249
BssNI	GRCGYC	4 cut(s)	216, 540, 984, 2291
BssT1I	CCWWGG	1 cut(s)	249
Bst2UI	CCWGG	1 cut(s)	1004
Bst4CI	ACNGT	7 cut(s)	197, 301, 470, 680, 724, 948, 1327
Bst6I	CTCTTC	5 cut(s)	383, 394, 796, 1201, 2337
BstACI	GRCGYC	4 cut(s)	216, 540, 984, 2291
BstAPI	GCANNNNNTGC	1 cut(s)	681
BstC8I	GCNNGC	1 cut(s)	1350
BstDEI	CTNAG	6 cut(s)	445, 836, 1330, 1418, 2010, 2037
BstDSI	CCRYGG	1 cut(s)	249
BstEII	GGTNACC	1 cut(s)	912
BstF5I	GGATG	9 cut(s)	428, 575, 652, 815, 1243, 1760, 1903, 2053, 2147
BstH2I	RGCGCY	1 cut(s)	543
BstHHI	GCGC	2 cut(s)	92, 542
BstMAI	GTCTC	4 cut(s)	163, 518, 611, 1333
BstMCI	CGRYCG	1 cut(s)	859
BstMWI	GCNNNNNNNGC	6 cut(s)	98, 185, 471, 681, 2144, 2222
BstNI	CCWGG	1 cut(s)	1004
BstNSI	RCATGY	5 cut(s)	225, 780, 1726, 2005, 2308
BstPI	GGTNACC	1 cut(s)	912
BstSCI	CCNGG	2 cut(s)	954, 1002
BstSFI	CTRYAG	6 cut(s)	118, 606, 973, 1335, 1353, 2268
BstV1I	GCAGC	7 cut(s)	132, 987, 1203, 1283, 1411, 2282, 2311
BstX2I	RGATCY	3 cut(s)	589, 1225, 1870
BstYI	RGATCY	3 cut(s)	589, 1225, 1870
BsuRI	GGCC	1 cut(s)	1533
BtgI	CCRYGG	1 cut(s)	249
BtsCI	GGATG	9 cut(s)	428, 575, 652, 815, 1243, 1760, 1903, 2053, 2147
BtsI	GCAGTG	3 cut(s)	108, 477, 1173
BtsIMutI	CAGTG	6 cut(s)	108, 477, 1173, 1385, 1686, 2126
BveI	ACCTGC	4 cut(s)	143, 1331, 2290, 2359
Cac8I	GCNNGC	1 cut(s)	1350
CaiI	CAGNNNCTG	1 cut(s)	1277
CciI	TCATGA	2 cut(s)	1620, 2218
CfoI	GCGC	2 cut(s)	92, 542
Cfr13I	GGNCC	4 cut(s)	1532, 1989, 2152, 2387
CseI	GACGC	4 cut(s)	463, 992, 2181, 2280
Csp6I	GTAC	6 cut(s)	418, 534, 780, 1720, 1843, 2379
CviQI	GTAC	6 cut(s)	418, 534, 780, 1720, 1843, 2379
DdeI	CTNAG	6 cut(s)	445, 836, 1330, 1418, 2010, 2037
DinI	GGCGCC	1 cut(s)	541
DrdI	GACNNNNNNGTC	1 cut(s)	846
DriI	GACNNNNNGTC	1 cut(s)	988
DseDI	GACNNNNNNGTC	1 cut(s)	846
Eam1104I	CTCTTC	5 cut(s)	383, 394, 796, 1201, 2337
Eam1105I	GACNNNNNGTC	1 cut(s)	988
EarI	CTCTTC	5 cut(s)	383, 394, 796, 1201, 2337
EciI	GGCGGA	2 cut(s)	330, 1250
Eco130I	CCWWGG	1 cut(s)	249
Eco47I	GGWCC	3 cut(s)	1989, 2152, 2387
Eco57I	CTGAAG	3 cut(s)	1521, 1710, 1983
Eco91I	GGTNACC	1 cut(s)	912
EcoO109I	RGGNCCY	2 cut(s)	1989, 2152
EcoO65I	GGTNACC	1 cut(s)	912
EcoRI	GAATTC	3 cut(s)	4, 270, 734
EcoRII	CCWGG	1 cut(s)	1002
EcoT14I	CCWWGG	1 cut(s)	249
EgeI	GGCGCC	1 cut(s)	541
EheI	GGCGCC	1 cut(s)	541
ErhI	CCWWGG	1 cut(s)	249
FalI	AAGNNNNNCTT	2 cut(s)	1812, 1844
FaqI	GGGAC	4 cut(s)	221, 1081, 2002, 2165
FauI	CCCGC	1 cut(s)	131
FauNDI	CATATG	1 cut(s)	349
FbaI	TGATCA	2 cut(s)	48, 243
Fnu4HI	GCNGC	8 cut(s)	121, 976, 979, 1192, 1272, 1425, 2271, 2325
FokI	GGATG	9 cut(s)	435, 562, 659, 802, 1250, 1747, 1910, 2060, 2154
Fsp4HI	GCNGC	8 cut(s)	121, 976, 979, 1192, 1272, 1425, 2271, 2325
FspBI	CTAG	7 cut(s)	312, 507, 842, 1062, 1268, 1514, 2103
GlaI	GCGC	2 cut(s)	91, 541
GluI	GCNGC	8 cut(s)	121, 976, 979, 1192, 1272, 1425, 2271, 2325
HaeII	RGCGCY	1 cut(s)	543
HaeIII	GGCC	1 cut(s)	1533
HapII	CCGG	4 cut(s)	566, 956, 1091, 1599
HgaI	GACGC	4 cut(s)	463, 992, 2181, 2280
HhaI	GCGC	2 cut(s)	92, 542
Hin1I	GRCGYC	4 cut(s)	216, 540, 984, 2291
Hin6I	GCGC	2 cut(s)	90, 540
HinP1I	GCGC	2 cut(s)	90, 540
HindIII	AAGCTT	2 cut(s)	833, 1634
HinfI	GANTC	9 cut(s)	34, 1020, 1039, 1145, 1288, 1527, 1671, 2131, 2264
HpaII	CCGG	4 cut(s)	566, 956, 1091, 1599
HphI	GGTGA	3 cut(s)	238, 1998, 2194
Hpy166II	GTNNAC	1 cut(s)	2126
Hpy8I	GTNNAC	1 cut(s)	2126
Hpy99I	CGWCG	1 cut(s)	986
HpyAV	CCTTC	4 cut(s)	1802, 2159, 2163, 2400
HpyCH4III	ACNGT	7 cut(s)	197, 301, 470, 680, 724, 948, 1327
HpyCH4IV	ACGT	6 cut(s)	216, 234, 405, 1792, 2020, 2122
HpyF10VI	GCNNNNNNNGC	6 cut(s)	98, 185, 471, 681, 2144, 2222
HpyF3I	CTNAG	6 cut(s)	445, 836, 1330, 1418, 2010, 2037
HpySE526I	ACGT	6 cut(s)	216, 234, 405, 1792, 2020, 2122
Hsp92I	GRCGYC	4 cut(s)	216, 540, 984, 2291
HspAI	GCGC	2 cut(s)	90, 540
KasI	GGCGCC	1 cut(s)	539
Kpn2I	TCCGGA	1 cut(s)	1598
Ksp22I	TGATCA	2 cut(s)	48, 243
LguI	GCTCTTC	2 cut(s)	796, 1201
LmnI	GCTCC	6 cut(s)	176, 503, 817, 904, 957, 1653
Lsp1109I	GCAGC	7 cut(s)	132, 987, 1203, 1283, 1411, 2282, 2311
LweI	GCATC	5 cut(s)	88, 413, 584, 916, 2179
MaeI	CTAG	7 cut(s)	312, 507, 842, 1062, 1268, 1514, 2103
MaeII	ACGT	6 cut(s)	216, 234, 405, 1792, 2020, 2122
MaeIII	GTNAC	4 cut(s)	217, 475, 912, 2004
MfeI	CAATTG	1 cut(s)	1056
MflI	RGATCY	3 cut(s)	589, 1225, 1870
Mly113I	GGCGCC	1 cut(s)	540
MlyI	GAGTC	4 cut(s)	1029, 1048, 1665, 2125
MmeI	TCCRAC	2 cut(s)	1675, 2055
MroI	TCCGGA	1 cut(s)	1598
MseI	TTAA	6 cut(s)	831, 1157, 1631, 1796, 1853, 2228
MspA1I	CMGCKG	3 cut(s)	978, 1140, 2273
MspI	CCGG	4 cut(s)	566, 956, 1091, 1599
MspR9I	CCNGG	2 cut(s)	956, 1004
MunI	CAATTG	1 cut(s)	1056
Mva1269I	GAATGC	1 cut(s)	467
MvaI	CCWGG	1 cut(s)	1004
MwoI	GCNNNNNNNGC	6 cut(s)	98, 185, 471, 681, 2144, 2222
NarI	GGCGCC	1 cut(s)	540
NciI	CCSGG	1 cut(s)	956
NcoI	CCATGG	1 cut(s)	249
NdeI	CATATG	1 cut(s)	349
NlaIV	GGNNCC	5 cut(s)	541, 564, 953, 1990, 2153
NmuCI	GTSAC	3 cut(s)	217, 475, 2004
NspI	RCATGY	5 cut(s)	225, 780, 1726, 2005, 2308
PagI	TCATGA	2 cut(s)	1620, 2218
PaqCI	CACCTGC	1 cut(s)	2359
PciI	ACATGT	3 cut(s)	776, 2001, 2304
PciSI	GCTCTTC	2 cut(s)	796, 1201
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 2119
PctI	GAATGC	1 cut(s)	467
PfeI	GAWTC	5 cut(s)	34, 1145, 1288, 1527, 2264
PfoI	TCCNGGA	2 cut(s)	954, 1002
PkrI	GCNGC	8 cut(s)	122, 977, 980, 1193, 1273, 1426, 2272, 2326
Ple19I	CGATCG	1 cut(s)	859
PleI	GAGTC	4 cut(s)	1028, 1047, 1665, 2125
PluTI	GGCGCC	1 cut(s)	543
PpsI	GAGTC	4 cut(s)	1028, 1047, 1665, 2125
PpuMI	RGGWCCY	2 cut(s)	1989, 2152
PscI	ACATGT	3 cut(s)	776, 2001, 2304
PsiI	TTATAA	3 cut(s)	552, 1284, 1542
Psp1406I	AACGTT	1 cut(s)	2122
Psp5II	RGGWCCY	2 cut(s)	1989, 2152
Psp6I	CCWGG	1 cut(s)	1002
PspEI	GGTNACC	1 cut(s)	912
PspGI	CCWGG	1 cut(s)	1002
PspN4I	GGNNCC	5 cut(s)	541, 564, 953, 1990, 2153
PspPI	GGNCC	4 cut(s)	1532, 1989, 2152, 2387
PspPPI	RGGWCCY	2 cut(s)	1989, 2152
PstI	CTGCAG	3 cut(s)	122, 977, 2272
PstNI	CAGNNNCTG	1 cut(s)	1277
PsuI	RGATCY	3 cut(s)	589, 1225, 1870
PvuI	CGATCG	1 cut(s)	859
PvuII	CAGCTG	1 cut(s)	2273
RsaI	GTAC	6 cut(s)	419, 535, 781, 1721, 1844, 2380
RsaNI	GTAC	6 cut(s)	418, 534, 780, 1720, 1843, 2379
SapI	GCTCTTC	2 cut(s)	796, 1201
SaqAI	TTAA	6 cut(s)	831, 1157, 1631, 1796, 1853, 2228
SatI	GCNGC	8 cut(s)	121, 976, 979, 1192, 1272, 1425, 2271, 2325
Sau96I	GGNCC	4 cut(s)	1532, 1989, 2152, 2387
ScaI	AGTACT	2 cut(s)	1844, 2380
SchI	GAGTC	4 cut(s)	1029, 1048, 1665, 2125
ScrFI	CCNGG	2 cut(s)	956, 1004
SfaNI	GCATC	5 cut(s)	88, 413, 584, 916, 2179
SfcI	CTRYAG	6 cut(s)	118, 606, 973, 1335, 1353, 2268
SfoI	GGCGCC	1 cut(s)	541
SinI	GGWCC	3 cut(s)	1989, 2152, 2387
SmlI	CTYRAG	2 cut(s)	1818, 1846
SmoI	CTYRAG	2 cut(s)	1818, 1846
SsiI	CCGC	7 cut(s)	138, 341, 579, 587, 978, 1138, 1235
SspDI	GGCGCC	1 cut(s)	539
SspI	AATATT	1 cut(s)	1888
SspMI	CTAG	7 cut(s)	312, 507, 842, 1062, 1268, 1514, 2103
StyD4I	CCNGG	2 cut(s)	954, 1002
StyI	CCWWGG	1 cut(s)	249
TaaI	ACNGT	7 cut(s)	197, 301, 470, 680, 724, 948, 1327
TaiI	ACGT	6 cut(s)	219, 237, 408, 1795, 2023, 2125
TaqI	TCGA	9 cut(s)	65, 767, 855, 859, 886, 1018, 1732, 2278, 2452
TatI	WGTACW	4 cut(s)	779, 1719, 1842, 2378
TauI	GCSGC	1 cut(s)	981
TfiI	GAWTC	5 cut(s)	34, 1145, 1288, 1527, 2264
Tru1I	TTAA	6 cut(s)	831, 1157, 1631, 1796, 1853, 2228
Tru9I	TTAA	6 cut(s)	831, 1157, 1631, 1796, 1853, 2228
TscAI	CASTG	6 cut(s)	108, 484, 1180, 1392, 1693, 2133
TseFI	GTSAC	3 cut(s)	217, 475, 2004
TseI	GCWGC	7 cut(s)	120, 975, 1191, 1271, 1424, 2270, 2324
Tsp45I	GTSAC	3 cut(s)	217, 475, 2004
TspDTI	ATGAA	7 cut(s)	17, 474, 1254, 1609, 1637, 1922, 2334
TspGWI	ACGGA	1 cut(s)	435
TspRI	CASTG	6 cut(s)	108, 484, 1180, 1392, 1693, 2133
VpaK11BI	GGWCC	3 cut(s)	1989, 2152, 2387
XapI	RAATTY	5 cut(s)	4, 270, 734, 1745, 2371
XceI	RCATGY	5 cut(s)	225, 780, 1726, 2005, 2308
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1735
XspI	CTAG	7 cut(s)	312, 507, 842, 1062, 1268, 1514, 2103
ZraI	GACGTC	1 cut(s)	217
ZrmI	AGTACT	2 cut(s)	1844, 2380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.