Rorug06G0164900

mRNA-decapping enzyme subunit 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0009616
Physical Location & Seq
Forward (+)
23511165 .. 23517670
6506 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0164900.1

Sequence Viewer

Length: 2892 bp
ATGAAGAACCATACAAATATCAACACCATCCTTGTTCCTTTTATATTTTTCTTTGTTCTGTTTTCATGGATTTTCATGGCCATGAATGCACAGAACACAACTATTCAAGTGAATGTGGGGGTTATTCTTGACTTTGATTCAGGGAGCCAAAAAACTGATGAGTTTTACTGGAGTTGCATGAATCTGGCCCTCTCAGACTTCTATGCATCCAATCCTCACTACAAGACTAGGCTAGTTTTGCTCCCAGGAAACTCCAAAGGAAATGTTGTTGGTGCAGCTGCTGCAGCTGTAGATTTGATAAACAATGCAGAAGTCCAAGCAATCATAGGGCCTGTAACATCAATGCAGGCGAACTTCGTTGTTAATGTGGGATACCAAGCTCAAGTGCCCATTTTAACTTTTTCTGCATCCAGTCCTTCTCTTGCTTCACTCGGGAGCTCTTTCTTTTTCCGACTTACACAAAATGACTCAATCCAAGTGAAAGCCATAAGTAATATTGTTCAGAACTTTGGATGGAGACAAGTTGTTCCCATCTTTGAAGACACTTCTTATGGGGAGGGAATTATACCTTTTCTAATCGATGCCTTGCAAACTGTTGAAGCTCATGTTCCCCACAGAAGTGTAGTTTCCCAATCAGCCACTGATGATCAAATTGAAATTGAGCTTAACAGGTTAAAAGGGATGCCAACTAGAGTCTTCATTGTGCATATGAATCCTCATCTGTGCTCCAGGCTATTTGCCAAGGCAAAAAAGATTGGAATGGTGAGTGATGGTTATGTTTGGATCATTGCTAGTGGGATATCTAATCGTTTAAGTTTGATGAAACATTCACACCTAAATTCCATGGAAGGTGTGTTAGGTATACAAACATACATTCCAAGAACACTAAAGCTTAGAGAATTTGAAAAGCGGTGGAAAATGAAATTCCAACAAGAGAATCCAAACGTAACTAAGATTAAGTTGGATGTTTACGGATTTCAAGCTCATGATGCTGTCTTTGCACTAGCTATGGCAGTCGAAAAAGTTGGATATACAAGCATTGAATATCAAAAGCCAAGTGATTCCTTCAAGGCAACAGATCTTGATGCCCTTAAGGTATCTCAGTATGGTCAAAAACTTGTTGGAGCCCTGTCTGGTATTAGATTTGAAGGTTTAGCTGGAGATTTCAATGTCGTAGAAGGGGAGCTTCAGTCATCAACTTATAACATAATTAATGTAATTGGTGGTAAAGCAAAGGCAATTGCGTTGTGGACTCCAGAAAAAGGAATGGTTGTTCCAACAAACACAAGCAAAATCTTTACTAATTCCAAGTGCATTTTTGGACCCATTAAGTGGCCAGGTGATCCTATCTGTGTTCCTAGAGGATGGAAGATCCCAACTAATGGAAATAAGTTGAAAATAGGTGTTCCTGTCAAGAAAGGTTTTGAAGAGTTTGTTAGGATCACGAAAGATCCTAATACTAACACAACGACTGTCACAGGGTTCTGTATTGATGTCTTCCTTGCAGCAGTGAAATTATTACCATATGATCTTCCTCATGTTTTCATTCCCTATGAAAATTCTAATGGGTCGATGAATGGGACTTATGATGATTTGGTCTATCAAGTATATCTCGAGAAATTTGATGCTGTTGTTGGAGATACAACAATTAGAGCAAACAGATCCTTGTATGTTGACTTTACAATGCCATACACTAAATCTGATGTAGGAATGGTTGTGCTAATCAGAGACAGCACAAGGAAAAATGCATGGATTTTCATGAAGCCTTTGACATGGGGCCTTTGGTCGACAACTTTGTGTTTCTTTATCTTTATTGGTTTTGTTGTTTGGGTATTGGAACATCGAGTTAATGAAGATTTTCGGGGTCCTCCTTCACATCAAGTTGGAACAAGCTTCTGGTTTTCTTTCTCAACCATGGTTTTTGCACATAGGGAGAGAGTGGTCAGCAACTTGGCTAGATTTGTGATGACTATATGGGTATTTGTTATGCTCATAGTGACACAAAGTTACACAGCTAGTCTCTCATCACTATTAACAGTCCAACAACTCATGCCGACTGTTACTGACTTAAGTGATCTTTTAAGGAATGGCGATGATGTCGGCTACATCGAGAATGCCTTTGTTCGTGAAGTCTTGTATGAAATAGGTTTTAATAATACCAGGCTCAGGGTTATTAAATCCGCGGAAGATGGTGATAAAGAGCTCACAAAAGGTACTACAAAGGGTGGTATTGCTGCTTTTGTTGGTGGAACGCCATTGTTGAAGGTTTTTGTTGCAAAGTACTGCTCCAAATACACCATGATTGGACCTATCTCCAAAACTAATGGGTTTGCTTTCGTGTTCCCTAAACGTTCACCTCTTGTAGCTGATATGTCAAGCGCAATCCTAAATTTGACCGAAGGAAAGGAGATTCTGAATCTTGAAGCCACTTGGCTAGGGAACGAAAGCATTTGTCAAGGCTCAAGTTCTGCCAATATATCTGGCAACAGTCTTGGCCTTGAGAGCTTTTGGGGACTATTCCTCATTGCTGGAGTCGCTTCTGTATTAGCTCTCATCATATTTTTTGCTTCCTTCCTTTACGAGCATAAGCATGTCTTGATGCCCCCTAATTCAAGAGCTTCCATATGGAGAAGGATTCATGCCTTAATTGAAATTTTTGATGATAGAGATGCCAGCTCTTATACTTTCAGAAGCAGTCAACCGTCTAATAAAATCATTAGTGTTGGCGATCATGGACCGAATGCGTCACCGATTAGCAACTGGCCAGAAAGCCCCTTCAGCTATACAAACCATGAAGATCTTGACTCTGTATTTGGAGGTCAACAAACACCAGCTCCAGGTGGAGCATCTCCGGAACCAGTTCCAACTATTGAGCTTGCTATCACTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000287 GO:0000288 GO:0000290 GO:0000291 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005845 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010072 GO:0010154 GO:0010468 GO:0010494 GO:0010605 GO:0010608 GO:0010629 GO:0016032 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0019048 GO:0019222 GO:0019439 GO:0022414 GO:0030145 GO:0030554 GO:0031086 GO:0031087 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0034428 GO:0034518 GO:0034641 GO:0034655 GO:0035639 GO:0035770 GO:0035821 GO:0036094 GO:0036464 GO:0040029 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0046872 GO:0046914 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050072 GO:0050789 GO:0051701 GO:0051704 GO:0051817 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0097367 GO:0098745 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DCP2 NUDIX

Protein Analysis

963

Amino Acids

106.76

Weight (kDa)

7.62

Isoelectric Point (pI)

31.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 343 6.2e-17 Periplasmic binding protein
ANF_receptor PF01094 59 - 408 1.2e-73 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 485 - 575 7.4e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 528 - 813 7.8e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 592 - 846 6.2e-38 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
AccB7I CCANNNNNTGG 2 cut(s) 1332, 1382
AccI GTMKAC 2 cut(s) 862, 1787
AccII CGCG 1 cut(s) 2183
AccIII TCCGGA 1 cut(s) 2851
AciI CCGC 3 cut(s) 910, 2181, 2183
AclI AACGTT 1 cut(s) 2350
AclWI GGATC 6 cut(s) 791, 1337, 1366, 1445, 1448, 1656
AcoI YGGCCR 3 cut(s) 78, 1334, 2762
AcsI RAATTY 7 cut(s) 838, 899, 923, 1558, 1619, 2389, 2652
AcuI CTGAAG 2 cut(s) 1172, 2761
AfaI GTAC 2 cut(s) 2215, 2282
AfiI CCNNNNNNNGG 5 cut(s) 1262, 1332, 1382, 2166, 2837
AflII CTTAAG 2 cut(s) 1091, 2068
AjnI CCWGG 5 cut(s) 244, 728, 1336, 2159, 2836
AleI CACNNNNGTG 1 cut(s) 618
AloI GAACNNNNNNTCC 2 cut(s) 1257, 1289
Alw21I GWGCWC 3 cut(s) 440, 728, 2205
Alw26I GTCTC 3 cut(s) 511, 1722, 2024
AlwI GGATC 6 cut(s) 791, 1337, 1366, 1445, 1448, 1656
AlwNI CAGNNNCTG 2 cut(s) 281, 641
Ama87I CYCGRG 2 cut(s) 431, 1613
Aor13HI TCCGGA 1 cut(s) 2851
AoxI GGCC 7 cut(s) 78, 186, 329, 1334, 1777, 2494, 2762
ApeKI GCWGC 6 cut(s) 275, 278, 281, 284, 1505, 2234
ApoI RAATTY 7 cut(s) 838, 899, 923, 1558, 1619, 2389, 2652
ArsI GACNNNNNNTTYG 2 cut(s) 2795, 2827
AseI ATTAAT 1 cut(s) 1212
Asp700I GAANNNNTTC 2 cut(s) 1857, 2859
AspLEI GCGC 1 cut(s) 2381
AspS9I GGNCC 7 cut(s) 187, 329, 1322, 1777, 1865, 2306, 2735
AsuHPI GGTGA 5 cut(s) 775, 1352, 2204, 2346, 2739
AvaI CYCGRG 2 cut(s) 431, 1613
AvaII GGWCC 4 cut(s) 1322, 1865, 2306, 2735
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 3 cut(s) 80, 1336, 2764
BanII GRGCYC 3 cut(s) 440, 1129, 2205
BbsI GAAGAC 3 cut(s) 546, 688, 1489
Bbv12I GWGCWC 3 cut(s) 440, 728, 2205
BbvI GCAGC 6 cut(s) 265, 268, 287, 296, 1517, 2221
BccI CCATC 6 cut(s) 35, 507, 539, 764, 1359, 2183
BciT130I CCWGG 5 cut(s) 246, 730, 1338, 2161, 2838
BciVI GTATCC 1 cut(s) 365
BclI TGATCA 1 cut(s) 646
BcoDI GTCTC 3 cut(s) 511, 1722, 2024
BfaI CTAG 9 cut(s) 228, 233, 690, 792, 1004, 1359, 1956, 2016, 2435
BfmI CTRYAG 2 cut(s) 282, 288
BfrI CTTAAG 2 cut(s) 1091, 2068
BfuI GTATCC 1 cut(s) 365
BglII AGATCT 2 cut(s) 1078, 2797
BisI GCNGC 6 cut(s) 276, 279, 282, 285, 1506, 2235
BlsI GCNGC 6 cut(s) 277, 280, 283, 286, 1507, 2236
BmcAI AGTACT 1 cut(s) 2282
Bme1390I CCNGG 5 cut(s) 246, 730, 1338, 2161, 2838
Bme18I GGWCC 4 cut(s) 1322, 1865, 2306, 2735
BmeT110I CYCGRG 2 cut(s) 431, 1613
BmgT120I GGNCC 7 cut(s) 187, 329, 1322, 1777, 1865, 2306, 2735
BmiI GGNNCC 6 cut(s) 146, 1126, 1324, 1778, 1866, 2856
BmrFI CCNGG 5 cut(s) 246, 730, 1338, 2161, 2838
BpiI GAAGAC 3 cut(s) 546, 688, 1489
BpmI CTGGAG 6 cut(s) 190, 712, 1179, 1239, 2550, 2820
Bpu10I CCTNAGC 1 cut(s) 2165
BpuEI CTTGAG 3 cut(s) 366, 2446, 2519
Bsa29I ATCGAT 1 cut(s) 579
BsaJI CCNNGG 5 cut(s) 244, 741, 843, 1914, 2181
BsaWI WCCGGW 1 cut(s) 2851
BsaXI ACNNNNNCTCC 4 cut(s) 1175, 1205, 2818, 2848
Bsc4I CCNNNNNNNGG 5 cut(s) 1262, 1332, 1382, 2166, 2837
Bse1I ACTGG 4 cut(s) 173, 411, 2765, 2858
Bse3DI GCAATG 2 cut(s) 786, 2523
BseAI TCCGGA 1 cut(s) 2851
BseBI CCWGG 5 cut(s) 246, 730, 1338, 2161, 2838
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 5 cut(s) 244, 741, 843, 1914, 2181
BseGI GGATG 7 cut(s) 27, 206, 407, 518, 687, 970, 1370
BseLI CCNNNNNNNGG 5 cut(s) 1262, 1332, 1382, 2166, 2837
BseMI GCAATG 2 cut(s) 786, 2523
BseMII CTCAG 3 cut(s) 207, 1115, 2179
BseNI ACTGG 4 cut(s) 173, 411, 2765, 2858
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 6 cut(s) 265, 268, 287, 296, 1517, 2221
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 2183
BshFI GGCC 7 cut(s) 80, 188, 331, 1336, 1779, 2496, 2764
BshVI ATCGAT 1 cut(s) 579
BsiHKAI GWGCWC 3 cut(s) 440, 728, 2205
BsiHKCI CYCGRG 2 cut(s) 431, 1613
BsiSI CCGG 1 cut(s) 2852
BslFI GGGAC 2 cut(s) 1594, 2526
BslI CCNNNNNNNGG 5 cut(s) 1262, 1332, 1382, 2166, 2837
BsmAI GTCTC 3 cut(s) 511, 1722, 2024
BsmFI GGGAC 2 cut(s) 1594, 2526
BsmI GAATGC 3 cut(s) 91, 2119, 2746
BsnI GGCC 7 cut(s) 80, 188, 331, 1336, 1779, 2496, 2764
BsoBI CYCGRG 2 cut(s) 431, 1613
Bsp1286I GDGCHC 5 cut(s) 390, 440, 728, 1129, 2205
Bsp13I TCCGGA 1 cut(s) 2851
Bsp19I CCATGG 2 cut(s) 843, 1914
BspACI CCGC 3 cut(s) 910, 2181, 2183
BspANI GGCC 7 cut(s) 80, 188, 331, 1336, 1779, 2496, 2764
BspCNI CTCAG 3 cut(s) 206, 1114, 2178
BspDI ATCGAT 1 cut(s) 579
BspEI TCCGGA 1 cut(s) 2851
BspFNI CGCG 1 cut(s) 2183
BspHI TCATGA 2 cut(s) 985, 1758
BspLI GGNNCC 6 cut(s) 146, 1126, 1324, 1778, 1866, 2856
BspMAI CTGCAG 1 cut(s) 286
BspPI GGATC 6 cut(s) 791, 1337, 1366, 1445, 1448, 1656
BspTI CTTAAG 2 cut(s) 1091, 2068
BsrDI GCAATG 2 cut(s) 786, 2523
BsrI ACTGG 4 cut(s) 173, 411, 2765, 2858
BssECI CCNNGG 5 cut(s) 244, 741, 843, 1914, 2181
BssNAI GTATAC 1 cut(s) 863
BssT1I CCWWGG 3 cut(s) 741, 843, 1914
Bst1107I GTATAC 1 cut(s) 863
Bst2UI CCWGG 5 cut(s) 246, 730, 1338, 2161, 2838
Bst4CI ACNGT 6 cut(s) 595, 1474, 2038, 2059, 2489, 2703
Bst6I CTCTTC 1 cut(s) 1422
BstAFI CTTAAG 2 cut(s) 1091, 2068
BstAPI GCANNNNNTGC 1 cut(s) 281
BstC8I GCNNGC 3 cut(s) 348, 2674, 2877
BstDEI CTNAG 5 cut(s) 193, 893, 951, 1101, 2165
BstDSI CCRYGG 3 cut(s) 843, 1914, 2181
BstF5I GGATG 7 cut(s) 27, 206, 407, 518, 687, 970, 1370
BstFNI CGCG 1 cut(s) 2183
BstHHI GCGC 1 cut(s) 2381
BstMAI GTCTC 3 cut(s) 511, 1722, 2024
BstMWI GCNNNNNNNGC 9 cut(s) 86, 238, 281, 284, 989, 998, 2502, 2534, 2778
BstNI CCWGG 5 cut(s) 246, 730, 1338, 2161, 2838
BstNSI RCATGY 1 cut(s) 2594
BstSCI CCNGG 5 cut(s) 244, 728, 1336, 2159, 2836
BstSFI CTRYAG 2 cut(s) 282, 288
BstSLI GKGCMC 1 cut(s) 390
BstUI CGCG 1 cut(s) 2183
BstV1I GCAGC 6 cut(s) 265, 268, 287, 296, 1517, 2221
BstV2I GAAGAC 3 cut(s) 546, 688, 1489
BstX2I RGATCY 5 cut(s) 1078, 1371, 1450, 1661, 2797
BstYI RGATCY 5 cut(s) 1078, 1371, 1450, 1661, 2797
BstZ17I GTATAC 1 cut(s) 863
Bsu15I ATCGAT 1 cut(s) 579
BsuI GTATCC 1 cut(s) 365
BsuRI GGCC 7 cut(s) 80, 188, 331, 1336, 1779, 2496, 2764
BsuTUI ATCGAT 1 cut(s) 579
BtgI CCRYGG 3 cut(s) 843, 1914, 2181
BtgZI GCGATG 1 cut(s) 2106
BtsCI GGATG 7 cut(s) 27, 206, 407, 518, 687, 970, 1370
BtsI GCAGTG 1 cut(s) 1515
BtsIMutI CAGTG 2 cut(s) 639, 1515
Cac8I GCNNGC 3 cut(s) 348, 2674, 2877
CaiI CAGNNNCTG 2 cut(s) 281, 641
CciI TCATGA 2 cut(s) 985, 1758
CfoI GCGC 1 cut(s) 2381
Cfr13I GGNCC 7 cut(s) 187, 329, 1322, 1777, 1865, 2306, 2735
Cfr42I CCGCGG 1 cut(s) 2184
ClaI ATCGAT 1 cut(s) 579
CseI GACGC 1 cut(s) 2733
Csp6I GTAC 2 cut(s) 2214, 2281
CviQI GTAC 2 cut(s) 2214, 2281
DdeI CTNAG 5 cut(s) 193, 893, 951, 1101, 2165
EaeI YGGCCR 3 cut(s) 78, 1334, 2762
Eam1104I CTCTTC 1 cut(s) 1422
EarI CTCTTC 1 cut(s) 1422
Ecl136II GAGCTC 2 cut(s) 438, 2203
Eco130I CCWWGG 3 cut(s) 741, 843, 1914
Eco24I GRGCYC 3 cut(s) 440, 1129, 2205
Eco32I GATATC 1 cut(s) 801
Eco47I GGWCC 4 cut(s) 1322, 1865, 2306, 2735
Eco53kI GAGCTC 2 cut(s) 438, 2203
Eco57I CTGAAG 2 cut(s) 1172, 2761
Eco88I CYCGRG 2 cut(s) 431, 1613
EcoICRI GAGCTC 2 cut(s) 438, 2203
EcoO109I RGGNCCY 3 cut(s) 329, 1777, 1865
EcoRII CCWGG 5 cut(s) 244, 728, 1336, 2159, 2836
EcoRV GATATC 1 cut(s) 801
EcoT14I CCWWGG 3 cut(s) 741, 843, 1914
EcoT22I ATGCAT 2 cut(s) 208, 1750
EcoT38I GRGCYC 3 cut(s) 440, 1129, 2205
ErhI CCWWGG 3 cut(s) 741, 843, 1914
FalI AAGNNNNNCTT 4 cut(s) 1170, 1202, 2579, 2611
FaqI GGGAC 2 cut(s) 1594, 2526
FauNDI CATATG 3 cut(s) 708, 1525, 2624
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 2 cut(s) 862, 1787
Fnu4HI GCNGC 6 cut(s) 276, 279, 282, 285, 1506, 2235
FokI GGATG 7 cut(s) 14, 193, 394, 525, 694, 977, 1377
FriOI GRGCYC 3 cut(s) 440, 1129, 2205
Fsp4HI GCNGC 6 cut(s) 276, 279, 282, 285, 1506, 2235
FspBI CTAG 9 cut(s) 228, 233, 690, 792, 1004, 1359, 1956, 2016, 2435
GlaI GCGC 1 cut(s) 2380
GluI GCNGC 6 cut(s) 276, 279, 282, 285, 1506, 2235
GsuI CTGGAG 6 cut(s) 190, 712, 1179, 1239, 2550, 2820
HaeIII GGCC 7 cut(s) 80, 188, 331, 1336, 1779, 2496, 2764
HapII CCGG 1 cut(s) 2852
HgaI GACGC 1 cut(s) 2733
HhaI GCGC 1 cut(s) 2381
Hin6I GCGC 1 cut(s) 2379
HinP1I GCGC 1 cut(s) 2379
HincII GTYRAC 4 cut(s) 1675, 1788, 2699, 2822
HindII GTYRAC 4 cut(s) 1675, 1788, 2699, 2822
HindIII AAGCTT 2 cut(s) 890, 1891
HpaII CCGG 1 cut(s) 2852
HphI GGTGA 5 cut(s) 775, 1352, 2204, 2346, 2739
Hpy166II GTNNAC 8 cut(s) 863, 970, 1251, 1675, 1788, 2354, 2699, 2822
Hpy188I TCNGA 7 cut(s) 196, 452, 504, 1702, 1727, 2415, 2690
Hpy8I GTNNAC 8 cut(s) 863, 970, 1251, 1675, 1788, 2354, 2699, 2822
HpyCH4III ACNGT 6 cut(s) 595, 1474, 2038, 2059, 2489, 2703
HpyCH4IV ACGT 2 cut(s) 945, 2350
HpyF10VI GCNNNNNNNGC 9 cut(s) 86, 238, 281, 284, 989, 998, 2502, 2534, 2778
HpyF3I CTNAG 5 cut(s) 193, 893, 951, 1101, 2165
HpySE526I ACGT 2 cut(s) 945, 2350
HspAI GCGC 1 cut(s) 2379
Kpn2I TCCGGA 1 cut(s) 2851
Ksp22I TGATCA 1 cut(s) 646
KspI CCGCGG 1 cut(s) 2184
LmnI GCTCC 9 cut(s) 144, 246, 435, 731, 1124, 1183, 2291, 2839, 2843
Lsp1109I GCAGC 6 cut(s) 265, 268, 287, 296, 1517, 2221
MaeI CTAG 9 cut(s) 228, 233, 690, 792, 1004, 1359, 1956, 2016, 2435
MaeII ACGT 2 cut(s) 945, 2350
MaeIII GTNAC 7 cut(s) 334, 946, 1474, 1996, 2006, 2059, 2745
MfeI CAATTG 1 cut(s) 1239
MflI RGATCY 5 cut(s) 1078, 1371, 1450, 1661, 2797
MhlI GDGCHC 5 cut(s) 390, 440, 728, 1129, 2205
MlsI TGGCCA 3 cut(s) 80, 1336, 2764
MluNI TGGCCA 3 cut(s) 80, 1336, 2764
MlyI GAGTC 5 cut(s) 461, 702, 1246, 2541, 2798
Mox20I TGGCCA 3 cut(s) 80, 1336, 2764
Mph1103I ATGCAT 2 cut(s) 208, 1750
MroI TCCGGA 1 cut(s) 2851
MroXI GAANNNNTTC 2 cut(s) 1857, 2859
MscI TGGCCA 3 cut(s) 80, 1336, 2764
MslI CAYNNNNRTG 3 cut(s) 80, 618, 2589
Msp20I TGGCCA 3 cut(s) 80, 1336, 2764
MspA1I CMGCKG 3 cut(s) 278, 287, 2183
MspCI CTTAAG 2 cut(s) 1091, 2068
MspI CCGG 1 cut(s) 2852
MspR9I CCNGG 5 cut(s) 246, 730, 1338, 2161, 2838
MunI CAATTG 1 cut(s) 1239
Mva1269I GAATGC 3 cut(s) 91, 2119, 2746
MvaI CCWGG 5 cut(s) 246, 730, 1338, 2161, 2838
MvnI CGCG 1 cut(s) 2183
MwoI GCNNNNNNNGC 9 cut(s) 86, 238, 281, 284, 989, 998, 2502, 2534, 2778
NcoI CCATGG 2 cut(s) 843, 1914
NdeI CATATG 3 cut(s) 708, 1525, 2624
NlaIV GGNNCC 6 cut(s) 146, 1126, 1324, 1778, 1866, 2856
NmuCI GTSAC 3 cut(s) 1474, 1996, 2745
NsiI ATGCAT 2 cut(s) 208, 1750
NspI RCATGY 1 cut(s) 2594
OliI CACNNNNGTG 1 cut(s) 618
PaeR7I CTCGAG 1 cut(s) 1613
PagI TCATGA 2 cut(s) 985, 1758
PcsI WCGNNNNNNNCGW 1 cut(s) 2106
PctI GAATGC 3 cut(s) 91, 2119, 2746
PdmI GAANNNNTTC 2 cut(s) 1857, 2859
PfeI GAWTC 8 cut(s) 137, 181, 712, 937, 1061, 2410, 2416, 2635
PflMI CCANNNNNTGG 2 cut(s) 1332, 1382
PkrI GCNGC 6 cut(s) 277, 280, 283, 286, 1507, 2236
PleI GAGTC 5 cut(s) 461, 701, 1246, 2540, 2798
PpsI GAGTC 5 cut(s) 461, 701, 1246, 2540, 2798
PpuMI RGGWCCY 1 cut(s) 1865
PshBI ATTAAT 1 cut(s) 1212
PsiI TTATAA 1 cut(s) 1203
Psp124BI GAGCTC 2 cut(s) 440, 2205
Psp1406I AACGTT 1 cut(s) 2350
Psp5II RGGWCCY 1 cut(s) 1865
Psp6I CCWGG 5 cut(s) 244, 728, 1336, 2159, 2836
PspGI CCWGG 5 cut(s) 244, 728, 1336, 2159, 2836
PspN4I GGNNCC 6 cut(s) 146, 1126, 1324, 1778, 1866, 2856
PspPI GGNCC 7 cut(s) 187, 329, 1322, 1777, 1865, 2306, 2735
PspPPI RGGWCCY 1 cut(s) 1865
PstI CTGCAG 1 cut(s) 286
PstNI CAGNNNCTG 2 cut(s) 281, 641
PsuI RGATCY 5 cut(s) 1078, 1371, 1450, 1661, 2797
PvuII CAGCTG 2 cut(s) 278, 287
RsaI GTAC 2 cut(s) 2215, 2282
RsaNI GTAC 2 cut(s) 2214, 2281
RseI CAYNNNNRTG 3 cut(s) 80, 618, 2589
SacI GAGCTC 2 cut(s) 440, 2205
SacII CCGCGG 1 cut(s) 2184
SalI GTCGAC 1 cut(s) 1786
SatI GCNGC 6 cut(s) 276, 279, 282, 285, 1506, 2235
Sau96I GGNCC 7 cut(s) 187, 329, 1322, 1777, 1865, 2306, 2735
ScaI AGTACT 1 cut(s) 2282
SchI GAGTC 5 cut(s) 461, 702, 1246, 2541, 2798
ScrFI CCNGG 5 cut(s) 246, 730, 1338, 2161, 2838
SduI GDGCHC 5 cut(s) 390, 440, 728, 1129, 2205
SfcI CTRYAG 2 cut(s) 282, 288
Sfr274I CTCGAG 1 cut(s) 1613
Sfr303I CCGCGG 1 cut(s) 2184
SgrBI CCGCGG 1 cut(s) 2184
SinI GGWCC 4 cut(s) 1322, 1865, 2306, 2735
SlaI CTCGAG 1 cut(s) 1613
SmiMI CAYNNNNRTG 3 cut(s) 80, 618, 2589
SmlI CTYRAG 6 cut(s) 381, 1091, 1613, 2068, 2461, 2498
SmoI CTYRAG 6 cut(s) 381, 1091, 1613, 2068, 2461, 2498
SsiI CCGC 3 cut(s) 910, 2181, 2183
SspI AATATT 1 cut(s) 496
SspMI CTAG 9 cut(s) 228, 233, 690, 792, 1004, 1359, 1956, 2016, 2435
SstI GAGCTC 2 cut(s) 440, 2205
StyD4I CCNGG 5 cut(s) 244, 728, 1336, 2159, 2836
StyI CCWWGG 3 cut(s) 741, 843, 1914
TaaI ACNGT 6 cut(s) 595, 1474, 2038, 2059, 2489, 2703
TaiI ACGT 2 cut(s) 948, 2353
TaqI TCGA 7 cut(s) 579, 1017, 1571, 1614, 1787, 1843, 2109
TaqII GACCGA 2 cut(s) 2411, 2752
TatI WGTACW 1 cut(s) 2280
TfiI GAWTC 8 cut(s) 137, 181, 712, 937, 1061, 2410, 2416, 2635
TscAI CASTG 2 cut(s) 646, 1515
TseFI GTSAC 3 cut(s) 1474, 1996, 2745
TseI GCWGC 6 cut(s) 275, 278, 281, 284, 1505, 2234
Tsp45I GTSAC 3 cut(s) 1474, 1996, 2745
TspGWI ACGGA 1 cut(s) 987
TspRI CASTG 2 cut(s) 646, 1515
Van91I CCANNNNNTGG 2 cut(s) 1332, 1382
Vha464I CTTAAG 2 cut(s) 1091, 2068
VpaK11BI GGWCC 4 cut(s) 1322, 1865, 2306, 2735
VspI ATTAAT 1 cut(s) 1212
XapI RAATTY 7 cut(s) 838, 899, 923, 1558, 1619, 2389, 2652
XceI RCATGY 1 cut(s) 2594
XhoI CTCGAG 1 cut(s) 1613
XmiI GTMKAC 2 cut(s) 862, 1787
XmnI GAANNNNTTC 2 cut(s) 1857, 2859
XspI CTAG 9 cut(s) 228, 233, 690, 792, 1004, 1359, 1956, 2016, 2435
ZrmI AGTACT 1 cut(s) 2282
Zsp2I ATGCAT 2 cut(s) 208, 1750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.