Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0012578

Physical Location & Seq

Genomic Coordinates Reverse (-)

32667709 .. 32669278

Gene Structure 1570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0204900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGTGCCTTCCAAAAGCTCAAGGAGGTCTGGGTTTCAAAAATCTTCATGCTCACAACCTGGCCATGTTGGCAAAGCAAGGATGGCGTTTACTCTCCCATCCTTCTACGCTTGTAGCCCAAGTTTTCAAGGCGCTATACTATCCTCATGGTACTTTCCTCACTGCGGATATGGGGGAGCGACCATCGTACTCTTGGAGGAGTATTATGGAGGCTAGGCCTGTATTGCAGGCTGGATTAACCTGGCGGATTGGCAACGGGGCTTCTGTGGGTATATGGGATTCGGACTGGATTCCACAGGTTTCTCATCATTCCTTAGTCCGGCCTCTGGATACTATCTTTGAGAGAGTTGCAGATTTGATTAACCAGTCTACATGGTCGTGGGATGAGGCTGCTGTACTAATGTGTTTTGAGCCTCAGGTGGCTACACAGGTTCTCTCCATCCCTCTTAGTAGACATCATGGTCAAGATCGAGTGGCGTGGAAATTGCACAAGAGAGGTTTCTTCTCGGTGAAGTCCGCTTATACGGTAGCTTGTGATCTTGTCATGGGCTACCAGTTCGCTTCAACTTCAGTTGGAGACCCGTATGGTCCGGTCTGGAGGGCTCTTTGGAAGGCAAAAGTCCCCAGTAAGGTTGTTATCTTTGGGTGGCGGGCAGTGCAGAACCTCCTTCCTACTCGAGCTGCTCTGTCGACCAAAGGGTACTCGGGGGATCTACATTGTGTTGTCTACTCCAATGCTATTGAATCAGTGGAGCATTTGTTCTGCCAGTGTCCCTTCTCTACAGAGATCCTAGGTGCTCCTCCATTCCATCTTCAGTCTTCATCTGCCACTTGGAAGGACTGGTTCCTGGAGAGAGCTACTTCTATGCCTCCCGAGCTTTTTGATAAACTTCTTGTTCTGATGTGGAGTATCTGGAGGAATCGGAATGAGAAGCTGTGGAGGGATCGGACTCAAACAGGGTTGGGGGTTGCGGCCTCTGCAATGGCCTGGTTTGAGGAGTATTCCCGAGTCCACAGGGATGATGCACCGTTGGTGCGAAGTCATCCTCCTCGTAGGAAGAAATGGATGGCACCCATGGAAGATAGGCTTAAGTTAAACGTGGATGGGGCTTTCCTTCCAACTGTTCAGTATGGCGGTACAGGTGGAGTGTTAAGGAATGCCCATGGAGGTTTCATTGCTGCGTTCTCTTACAGGTCAGCTTTCGTTACCTCTCCATTGCATACTGAACTGGTGGCTATCAAGTATGGCCTAGAGTTGTTGCAGGCCTTGAATGTTACACGGGCTGTGATTGAGAGTGATTGTCTATATGCGATTCAGGCTATCAATTCCATGGCTGAGGATCTTTCTGATTTAGCTGCTTTGATTTCTGATATCAAAGGTTTAGTGAATGTCATGGGGGAGATTGTAATCAGTTTTACTCCTAGACAAGCAAATATGGTTGCTCATCGTCTAGCTAGTCATAGTTTTGATTCAAATGTCCATCTTGAATGGTTTACTATTGCTCCAGAGTTTATACTGGATGCCCTCTTGTACGATTGTAATCGTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000018 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0007005 GO:0008150 GO:0009892 GO:0009987 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045910 GO:0045934 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SSB

Protein Analysis

516

Amino Acids

57.93

Weight (kDa)

8.52

Isoelectric Point (pI)

35.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	191 - 262	1.7e-15	zinc-binding in reverse transcriptase
RVT_3	PF13456	366 - 487	6.9e-19	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012578)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g22540 FvH4_2g22540
malus_domestica	MD05G1206000.v1.1 MD10G1193100.v1.1
prunus_persica	Prupe.8G232500_v2.0.a1
pyrus_communis	pycom05g19220 pycom10g16660
rosa_chinensis	RchiOBHm_Chr6g0289591
rosa_laevigata	RLG00000012290
rosa_multiflora	Rmu_sc0001527.1_g000063 Rmu_sc0010363.1_g000003
rosa_roxburghii	Rroxscaffold_7G00177830
rosa_rugosa	Rorug06G0204900 Rorug06G0205000
rosa_samantha	Rh6AG316500 Rh6BG322900 Rh6CG329400 Rh6DG314900
rosa_wichuraiana	Rw6G027290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	459
AccB1I	GGYRCC	1 cut(s)	1069
AccI	GTMKAC	4 cut(s)	368, 451, 689, 726
AciI	CCGC	6 cut(s)	164, 244, 516, 649, 971, 1134
AclWI	GGATC	4 cut(s)	717, 781, 951, 1347
AcoI	YGGCCR	1 cut(s)	60
AcuI	CTGAAG	2 cut(s)	552, 797
AfaI	GTAC	6 cut(s)	151, 188, 396, 701, 1138, 1532
AfiI	CCNNNNNNNGG	4 cut(s)	163, 318, 325, 628
AflII	CTTAAG	1 cut(s)	1088
AgsI	TTSAA	7 cut(s)	37, 127, 564, 743, 1270, 1473, 1487
AjnI	CCWGG	4 cut(s)	57, 239, 846, 986
AloI	GAACNNNNNNTCC	2 cut(s)	743, 775
AluBI	AGCT	9 cut(s)	17, 530, 680, 857, 877, 934, 1199, 1355, 1454
AluI	AGCT	9 cut(s)	17, 530, 680, 857, 877, 934, 1199, 1355, 1454
Alw21I	GWGCWC	1 cut(s)	799
Alw26I	GTCTC	1 cut(s)	570
AlwI	GGATC	4 cut(s)	717, 781, 951, 1347
Ama87I	CYCGRG	4 cut(s)	675, 703, 872, 1005
AoxI	GGCC	7 cut(s)	60, 215, 320, 972, 984, 1246, 1263
ApeKI	GCWGC	4 cut(s)	389, 680, 1178, 1355
AspA2I	CCTAGG	1 cut(s)	790
AspLEI	GCGC	1 cut(s)	133
AspS9I	GGNCC	1 cut(s)	587
AsuHPI	GGTGA	1 cut(s)	520
AvaI	CYCGRG	4 cut(s)	675, 703, 872, 1005
AvaII	GGWCC	1 cut(s)	587
AvrII	CCTAGG	1 cut(s)	790
AxyI	CCTNAGG	1 cut(s)	414
BalI	TGGCCA	1 cut(s)	62
BanI	GGYRCC	1 cut(s)	1069
BanII	GRGCYC	1 cut(s)	604
BbsI	GAAGAC	1 cut(s)	810
Bbv12I	GWGCWC	1 cut(s)	799
BbvCI	CCTCAGC	1 cut(s)	1335
BbvI	GCAGC	4 cut(s)	376, 667, 1165, 1342
BccI	CCATC	8 cut(s)	75, 105, 190, 446, 816, 1060, 1097, 1488
BciT130I	CCWGG	4 cut(s)	59, 241, 848, 988
BciVI	GTATCC	1 cut(s)	322
BcoDI	GTCTC	1 cut(s)	570
BfaI	CTAG	7 cut(s)	213, 791, 1250, 1422, 1451, 1455, 1549
BfmI	CTRYAG	1 cut(s)	780
BfoI	RGCGCY	1 cut(s)	134
BfrI	CTTAAG	1 cut(s)	1088
BfuI	GTATCC	1 cut(s)	322
BglI	GCCNNNNNGGC	1 cut(s)	68
BisI	GCNGC	5 cut(s)	390, 681, 972, 1179, 1356
BlnI	CCTAGG	1 cut(s)	790
BlsI	GCNGC	5 cut(s)	391, 682, 973, 1180, 1357
Bme1390I	CCNGG	4 cut(s)	59, 241, 848, 988
Bme18I	GGWCC	1 cut(s)	587
BmeT110I	CYCGRG	4 cut(s)	675, 703, 872, 1005
BmgT120I	GGNCC	1 cut(s)	587
BmiI	GGNNCC	2 cut(s)	845, 1071
BmrFI	CCNGG	4 cut(s)	59, 241, 848, 988
BmrI	ACTGGG	1 cut(s)	618
BmsI	GCATC	2 cut(s)	1012, 1510
BmuI	ACTGGG	1 cut(s)	618
BpiI	GAAGAC	1 cut(s)	810
BpmI	CTGGAG	4 cut(s)	616, 869, 934, 1488
Bpu10I	CCTNAGC	1 cut(s)	1335
BsaBI	GATNNNNATC	2 cut(s)	1406, 1539
BsaI	GGTCTC	1 cut(s)	570
BsaJI	CCNNGG	4 cut(s)	790, 1074, 1162, 1329
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	4 cut(s)	743, 773, 1486, 1516
Bsc4I	CCNNNNNNNGG	4 cut(s)	163, 318, 325, 628
Bse1I	ACTGG	8 cut(s)	290, 364, 553, 624, 766, 845, 1233, 1521
Bse21I	CCTNAGG	1 cut(s)	414
Bse3DI	GCAATG	3 cut(s)	987, 1173, 1214
Bse8I	GATNNNNATC	2 cut(s)	1406, 1539
BseBI	CCWGG	4 cut(s)	59, 241, 848, 988
BseDI	CCNNGG	4 cut(s)	790, 1074, 1162, 1329
BseGI	GGATG	9 cut(s)	86, 97, 388, 438, 1024, 1042, 1071, 1108, 1525
BseJI	GATNNNNATC	2 cut(s)	1406, 1539
BseLI	CCNNNNNNNGG	4 cut(s)	163, 318, 325, 628
BseMI	GCAATG	3 cut(s)	987, 1173, 1214
BseMII	CTCAG	2 cut(s)	428, 1326
BseNI	ACTGG	8 cut(s)	290, 364, 553, 624, 766, 845, 1233, 1521
BseRI	GAGGAG	4 cut(s)	211, 789, 1010, 1038
BseXI	GCAGC	4 cut(s)	376, 667, 1165, 1342
BsgI	GTGCAG	1 cut(s)	677
BshFI	GGCC	7 cut(s)	62, 217, 322, 974, 986, 1248, 1265
BshNI	GGYRCC	1 cut(s)	1069
BsiHKAI	GWGCWC	1 cut(s)	799
BsiHKCI	CYCGRG	4 cut(s)	675, 703, 872, 1005
BsiSI	CCGG	2 cut(s)	319, 590
BslFI	GGGAC	2 cut(s)	605, 756
BslI	CCNNNNNNNGG	4 cut(s)	163, 318, 325, 628
BsmAI	GTCTC	1 cut(s)	570
BsmFI	GGGAC	2 cut(s)	605, 756
BsmI	GAATGC	1 cut(s)	1162
BsnI	GGCC	7 cut(s)	62, 217, 322, 974, 986, 1248, 1265
Bso31I	GGTCTC	1 cut(s)	570
BsoBI	CYCGRG	4 cut(s)	675, 703, 872, 1005
Bsp1286I	GDGCHC	2 cut(s)	604, 799
Bsp143I	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
Bsp19I	CCATGG	3 cut(s)	1074, 1162, 1329
BspACI	CCGC	6 cut(s)	164, 244, 516, 649, 971, 1134
BspANI	GGCC	7 cut(s)	62, 217, 322, 974, 986, 1248, 1265
BspCNI	CTCAG	2 cut(s)	427, 1327
BspLI	GGNNCC	2 cut(s)	845, 1071
BspPI	GGATC	4 cut(s)	717, 781, 951, 1347
BspT107I	GGYRCC	1 cut(s)	1069
BspTI	CTTAAG	1 cut(s)	1088
BspTNI	GGTCTC	1 cut(s)	570
BsrDI	GCAATG	3 cut(s)	987, 1173, 1214
BsrI	ACTGG	8 cut(s)	290, 364, 553, 624, 766, 845, 1233, 1521
BssECI	CCNNGG	4 cut(s)	790, 1074, 1162, 1329
BssMI	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
BssT1I	CCWWGG	4 cut(s)	790, 1074, 1162, 1329
Bst2UI	CCWGG	4 cut(s)	59, 241, 848, 988
Bst4CI	ACNGT	3 cut(s)	526, 1029, 1123
BstAFI	CTTAAG	1 cut(s)	1088
BstC8I	GCNNGC	3 cut(s)	228, 651, 1263
BstDEI	CTNAG	4 cut(s)	313, 414, 446, 1335
BstDSI	CCRYGG	3 cut(s)	1074, 1162, 1329
BstF5I	GGATG	9 cut(s)	86, 97, 388, 438, 1024, 1042, 1071, 1108, 1525
BstH2I	RGCGCY	1 cut(s)	134
BstHHI	GCGC	1 cut(s)	133
BstKTI	GATC	6 cut(s)	469, 538, 712, 789, 946, 1342
BstMAI	GTCTC	1 cut(s)	570
BstMBI	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
BstMWI	GCNNNNNNNGC	7 cut(s)	68, 82, 223, 655, 874, 977, 1316
BstNI	CCWGG	4 cut(s)	59, 241, 848, 988
BstSCI	CCNGG	4 cut(s)	57, 239, 846, 986
BstSFI	CTRYAG	1 cut(s)	780
BstV1I	GCAGC	4 cut(s)	376, 667, 1165, 1342
BstV2I	GAAGAC	1 cut(s)	810
BstX2I	RGATCY	3 cut(s)	709, 786, 1339
BstYI	RGATCY	3 cut(s)	709, 786, 1339
Bsu36I	CCTNAGG	1 cut(s)	414
BsuI	GTATCC	1 cut(s)	322
BsuRI	GGCC	7 cut(s)	62, 217, 322, 974, 986, 1248, 1265
BtgI	CCRYGG	3 cut(s)	1074, 1162, 1329
BtsCI	GGATG	9 cut(s)	86, 97, 388, 438, 1024, 1042, 1071, 1108, 1525
BtsI	GCAGTG	2 cut(s)	159, 660
BtsIMutI	CAGTG	4 cut(s)	159, 660, 753, 773
Cac8I	GCNNGC	3 cut(s)	228, 651, 1263
CfoI	GCGC	1 cut(s)	133
Cfr13I	GGNCC	1 cut(s)	587
Csp6I	GTAC	6 cut(s)	150, 187, 395, 700, 1137, 1531
CviQI	GTAC	6 cut(s)	150, 187, 395, 700, 1137, 1531
DdeI	CTNAG	4 cut(s)	313, 414, 446, 1335
DpnI	GATC	6 cut(s)	468, 537, 711, 788, 945, 1341
DpnII	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
DrdI	GACNNNNNNGTC	1 cut(s)	459
DseDI	GACNNNNNNGTC	1 cut(s)	459
EaeI	YGGCCR	1 cut(s)	60
EciI	GGCGGA	1 cut(s)	259
Eco130I	CCWWGG	4 cut(s)	790, 1074, 1162, 1329
Eco147I	AGGCCT	2 cut(s)	217, 1265
Eco24I	GRGCYC	1 cut(s)	604
Eco31I	GGTCTC	1 cut(s)	570
Eco32I	GATATC	1 cut(s)	1372
Eco47I	GGWCC	1 cut(s)	587
Eco57I	CTGAAG	2 cut(s)	552, 797
Eco81I	CCTNAGG	1 cut(s)	414
Eco88I	CYCGRG	4 cut(s)	675, 703, 872, 1005
EcoRII	CCWGG	4 cut(s)	57, 239, 846, 986
EcoRV	GATATC	1 cut(s)	1372
EcoT14I	CCWWGG	4 cut(s)	790, 1074, 1162, 1329
EcoT38I	GRGCYC	1 cut(s)	604
ErhI	CCWWGG	4 cut(s)	790, 1074, 1162, 1329
FalI	AAGNNNNNCTT	2 cut(s)	1071, 1103
FaqI	GGGAC	2 cut(s)	605, 756
FauI	CCCGC	1 cut(s)	642
FblI	GTMKAC	4 cut(s)	368, 451, 689, 726
Fnu4HI	GCNGC	5 cut(s)	390, 681, 972, 1179, 1356
FokI	GGATG	9 cut(s)	84, 93, 395, 425, 1029, 1031, 1078, 1115, 1532
FriOI	GRGCYC	1 cut(s)	604
Fsp4HI	GCNGC	5 cut(s)	390, 681, 972, 1179, 1356
FspBI	CTAG	7 cut(s)	213, 791, 1250, 1422, 1451, 1455, 1549
GlaI	GCGC	1 cut(s)	132
GluI	GCNGC	5 cut(s)	390, 681, 972, 1179, 1356
GsuI	CTGGAG	4 cut(s)	616, 869, 934, 1488
HaeII	RGCGCY	1 cut(s)	134
HaeIII	GGCC	7 cut(s)	62, 217, 322, 974, 986, 1248, 1265
HapII	CCGG	2 cut(s)	319, 590
HhaI	GCGC	1 cut(s)	133
Hin6I	GCGC	1 cut(s)	131
HinP1I	GCGC	1 cut(s)	131
HincII	GTYRAC	1 cut(s)	690
HindII	GTYRAC	1 cut(s)	690
HinfI	GANTC	8 cut(s)	278, 289, 743, 919, 949, 1008, 1312, 1469
HpaII	CCGG	2 cut(s)	319, 590
HphI	GGTGA	1 cut(s)	520
Hpy166II	GTNNAC	7 cut(s)	89, 369, 452, 690, 727, 1012, 1494
Hpy188I	TCNGA	6 cut(s)	283, 900, 924, 948, 1348, 1369
Hpy188III	TCNNGA	8 cut(s)	326, 464, 595, 872, 913, 1005, 1484, 1505
Hpy8I	GTNNAC	7 cut(s)	89, 369, 452, 690, 727, 1012, 1494
HpyAV	CCTTC	7 cut(s)	17, 111, 604, 677, 784, 829, 1124
HpyCH4III	ACNGT	3 cut(s)	526, 1029, 1123
HpyCH4IV	ACGT	1 cut(s)	1098
HpyCH4V	TGCA	8 cut(s)	226, 350, 487, 658, 980, 1025, 1219, 1261
HpyF10VI	GCNNNNNNNGC	7 cut(s)	68, 82, 223, 655, 874, 977, 1316
HpyF3I	CTNAG	4 cut(s)	313, 414, 446, 1335
HpySE526I	ACGT	1 cut(s)	1098
HspAI	GCGC	1 cut(s)	131
Kzo9I	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
LmnI	GCTCC	4 cut(s)	175, 751, 802, 1507
Lsp1109I	GCAGC	4 cut(s)	376, 667, 1165, 1342
LweI	GCATC	2 cut(s)	1012, 1510
MaeI	CTAG	7 cut(s)	213, 791, 1250, 1422, 1451, 1455, 1549
MaeII	ACGT	1 cut(s)	1098
MaeIII	GTNAC	2 cut(s)	1204, 1273
MalI	GATC	6 cut(s)	468, 537, 711, 788, 945, 1341
MboI	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
MboII	GAAGA	6 cut(s)	35, 493, 803, 810, 1069, 1091
MflI	RGATCY	3 cut(s)	709, 786, 1339
MhlI	GDGCHC	2 cut(s)	604, 799
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	2 cut(s)	482, 1324
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	2 cut(s)	943, 1017
MmeI	TCCRAC	2 cut(s)	553, 1142
Mox20I	TGGCCA	1 cut(s)	62
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	5 cut(s)	236, 360, 1089, 1094, 1151
MslI	CAYNNNNRTG	2 cut(s)	376, 1017
Msp20I	TGGCCA	1 cut(s)	62
MspCI	CTTAAG	1 cut(s)	1088
MspI	CCGG	2 cut(s)	319, 590
MspR9I	CCNGG	4 cut(s)	59, 241, 848, 988
Mva1269I	GAATGC	1 cut(s)	1162
MvaI	CCWGG	4 cut(s)	59, 241, 848, 988
MwoI	GCNNNNNNNGC	7 cut(s)	68, 82, 223, 655, 874, 977, 1316
NcoI	CCATGG	3 cut(s)	1074, 1162, 1329
NdeII	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
NlaIV	GGNNCC	2 cut(s)	845, 1071
PaeR7I	CTCGAG	1 cut(s)	675
PceI	AGGCCT	2 cut(s)	217, 1265
PctI	GAATGC	1 cut(s)	1162
PfeI	GAWTC	6 cut(s)	278, 289, 743, 919, 1312, 1469
PfoI	TCCNGGA	1 cut(s)	846
PkrI	GCNGC	5 cut(s)	391, 682, 973, 1180, 1357
PleI	GAGTC	2 cut(s)	943, 1016
PpsI	GAGTC	2 cut(s)	943, 1016
Psp6I	CCWGG	4 cut(s)	57, 239, 846, 986
PspGI	CCWGG	4 cut(s)	57, 239, 846, 986
PspN4I	GGNNCC	2 cut(s)	845, 1071
PspPI	GGNCC	1 cut(s)	587
PspXI	VCTCGAGB	1 cut(s)	675
PsuI	RGATCY	3 cut(s)	709, 786, 1339
RsaI	GTAC	6 cut(s)	151, 188, 396, 701, 1138, 1532
RsaNI	GTAC	6 cut(s)	150, 187, 395, 700, 1137, 1531
RseI	CAYNNNNRTG	2 cut(s)	376, 1017
SalI	GTCGAC	1 cut(s)	688
SaqAI	TTAA	5 cut(s)	236, 360, 1089, 1094, 1151
SatI	GCNGC	5 cut(s)	390, 681, 972, 1179, 1356
Sau3AI	GATC	6 cut(s)	466, 535, 709, 786, 943, 1339
Sau96I	GGNCC	1 cut(s)	587
SchI	GAGTC	2 cut(s)	943, 1017
ScrFI	CCNGG	4 cut(s)	59, 241, 848, 988
SduI	GDGCHC	2 cut(s)	604, 799
SfaNI	GCATC	2 cut(s)	1012, 1510
SfcI	CTRYAG	1 cut(s)	780
Sfr274I	CTCGAG	1 cut(s)	675
SinI	GGWCC	1 cut(s)	587
SlaI	CTCGAG	1 cut(s)	675
SmiMI	CAYNNNNRTG	2 cut(s)	376, 1017
SmlI	CTYRAG	3 cut(s)	18, 675, 1088
SmoI	CTYRAG	3 cut(s)	18, 675, 1088
Sse9I	AATT	2 cut(s)	482, 1324
SseBI	AGGCCT	2 cut(s)	217, 1265
SsiI	CCGC	6 cut(s)	164, 244, 516, 649, 971, 1134
SspMI	CTAG	7 cut(s)	213, 791, 1250, 1422, 1451, 1455, 1549
StuI	AGGCCT	2 cut(s)	217, 1265
StyD4I	CCNGG	4 cut(s)	57, 239, 846, 986
StyI	CCWWGG	4 cut(s)	790, 1074, 1162, 1329
TaaI	ACNGT	3 cut(s)	526, 1029, 1123
TaiI	ACGT	1 cut(s)	1101
TaqI	TCGA	3 cut(s)	469, 676, 689
TasI	AATT	2 cut(s)	482, 1324
TatI	WGTACW	1 cut(s)	394
TauI	GCSGC	1 cut(s)	974
TfiI	GAWTC	6 cut(s)	278, 289, 743, 919, 1312, 1469
Tru1I	TTAA	5 cut(s)	236, 360, 1089, 1094, 1151
Tru9I	TTAA	5 cut(s)	236, 360, 1089, 1094, 1151
TscAI	CASTG	4 cut(s)	166, 660, 753, 773
TseI	GCWGC	4 cut(s)	389, 680, 1178, 1355
TspDTI	ATGAA	3 cut(s)	35, 810, 1162
TspRI	CASTG	4 cut(s)	166, 660, 753, 773
Vha464I	CTTAAG	1 cut(s)	1088
VpaK11BI	GGWCC	1 cut(s)	587
XcmI	CCANNNNNNNNNTGG	1 cut(s)	189
XhoI	CTCGAG	1 cut(s)	675
XmaJI	CCTAGG	1 cut(s)	790
XmiI	GTMKAC	4 cut(s)	368, 451, 689, 726
XspI	CTAG	7 cut(s)	213, 791, 1250, 1422, 1451, 1455, 1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.