Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0014488

Physical Location & Seq

Genomic Coordinates Reverse (-)

33909108 .. 33912157

Gene Structure 3050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0213100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGGCTTCACGTCTACTCCTCCACGCACATACGATGTGTTTCTGAGTTTCAGGGGTATGGACACCCGTGAGGGTTTTACAGAGCGTTTATACCAGAAACTGCGGTGGCGCAAATTTGTTGTTTTCAAAGACGACGAAGACCATGAAAAAGGAATGTCTATCTCTGAGAAGCTCCTGAGTGCAATAGAAGAATCAAAGACTGCCATCATTGTCATCTCGCCAAACTTTGCTTCATCCACCTGGTGCTTGGATGAACTGTTGAAGATTCTTGAATGCATGGAAGCTAGGAATACAGTTTTGCCGGTTTTTTATGATGTGGATCCCGCCCATGTCCGACATCAATTGGGGACTTTTGCAGAAGCCATGGTAAAGCATGAACAAAGAATTAAGGTAGACAAGGTGCAACTTTGGAGAGATGCTTTAACAAAATTGGCTAATTTCGTTGGGTGGACTTCAAAAGATTATGGCTCTGAGGCAGAGCTTATCGATGAAATAGTGGAACAAGTGCAGAATAAGGTACATCCTGCTATCACCTTGTTAGGTTCCACAGAGAAGTTGGTTGGGATGGATTCTGAACTAAAGAATTTTATTCGGCTCTTAGAACCGGAGGCTGATGATGGTCGCTTTTTAGGGATATGCGGTATGGGCGGGATCGGTAAGACGACTCTTGCTAGATTAGTGTATGAGAGAGTTTCGCATAATTTCCAAGTTAGCTGCTTTCTTGCAAATGTCAGAGAAGTTTATAGGAAACAGGGTCTTGTTCATTTGCAAAACCAGCTTCTTTCCCAAATCTTGAAGGAAAAATTTGTAGAAGTATTCGATGTTCATACCGCAGCCCGTATGATTAAGAATAGTTTGCAGAATTATAAGGTTCTTCTTATTCTTGATGATGTGGATCGAATTGAGCAACTAGAGTCCGTGGCCGGAAAGGCAGACTGGTTTGGTAAGGGAAGCAGAATCATCATTACAACTAGAGACCATCATATGCTGTGCGATCATGGGGTAAATAGATTGTACAAGTCTGCCTCAAGAGCATTAGATGAAGCACTTCAACTCTTTAGTCGGAAAGCCTTTCACAGAGATGAACCTGAAGAAGCTTATATCAAATTGTCCAACTGTTTCATCAAATATTGCCAGGGCCATTCATTAGCTCTTAAAATTTTGGGATCCTTTTTATATGGTAAAGGTCTAGATATATGGGATAGTACATTGGTTAAACTCCAAAAAATTAGTGATCACAGCATTTTTTCTGTGCTCAAAGTGGGTTATGATGGACTAAACAGGAAAGAGAAGAGAATTTTTCTGGATGTCGCATGTTTCTTTAGGGGTGAACAACGGGAGCGAGTGATTCAGATACTAAGTTCCAACTTTGTTGGTGCTCATGTGATGGTAAAAGCTCTCGAGGAGAAATCTTTCTTAACTTCATATAAGAACTGTGTGGAGATGCATGACTTGATCCAAGAATTGGGACGGGAAATTGTTCGTGAAGAGTGTCTTACGAAGCCTGGTCGACGCAGTCGGCTGTGGCATCATAAAGAAATTTTGGAAGTACTCGCATCCGATGAGGGTACAGAAGCAATTGAAGGCATACTTTTGAACTTGCCTGATGATCATGAATCAACAATGATAGAAGATCGCTTGAATCCTAAAGCCTTCTACAAGATGAGCAATCTGAGGTTTCTCAAAATTCACAATTTGAGGATGAGCCTTCCTCTAATCTCCAAATATCTTCCTGATTCCTTGAGGCATTTCGAATGGAGTTGTTCTTGTCCAAGCATAGATGATCAAGATAGTGCTAGTGAGGATTGGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043527 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

605

Amino Acids

69.68

Weight (kDa)

6.19

Isoelectric Point (pI)

41.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	11 - 188	2.7e-51	TIR domain
TIR_2	PF13676	13 - 108	2.1e-14	TIR domain
NB-ARC	PF00931	199 - 361	2.7e-20	NB-ARC domain
WHD_ROQ1	PF23282	427 - 497	3e-14	Disease resistance protein Roq1-like, winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03110
fragaria_vesca	FvH4_2g23260
malus_domestica	MD03G1261900.v1.1 MD11G1282600.v1.1
prunus_persica	Prupe.8G238200_v2.0.a1
pyrus_communis	pycom03g20960 pycom11g25030
rosa_chinensis	RchiOBHm_Chr6g0290561
rosa_laevigata	RLG00000012193 RLG00000012197
rosa_multiflora	Rmu_sc0017853.1_g000005 Rmu_sc0022570.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176890
rosa_rugosa	Rorug06G0213100
rosa_samantha	Rh6AG324200 Rh6DG324700
rosa_wichuraiana	Rw6G028130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	867
AccB7I	CCANNNNNTGG	1 cut(s)	1465
AccI	GTMKAC	3 cut(s)	14, 393, 1510
AciI	CCGC	5 cut(s)	103, 324, 639, 648, 831
AclWI	GGATC	7 cut(s)	314, 327, 659, 903, 1161, 1174, 1450
AcoI	YGGCCR	1 cut(s)	921
AcsI	RAATTY	7 cut(s)	113, 583, 803, 1158, 1296, 1539, 1686
AcuI	CTGAAG	1 cut(s)	1110
AdeI	CACNNNGTG	1 cut(s)	243
AfaI	GTAC	5 cut(s)	519, 1016, 1207, 1551, 1570
AfiI	CCNNNNNNNGG	1 cut(s)	1465
AgsI	TTSAA	9 cut(s)	127, 262, 272, 456, 796, 1052, 1583, 1597, 1642
AjiI	CACGTC	1 cut(s)	12
AjnI	CCWGG	3 cut(s)	239, 1134, 1504
AjuI	GAANNNNNNNTTGG	2 cut(s)	214, 246
AluBI	AGCT	8 cut(s)	172, 284, 481, 714, 778, 1097, 1151, 1397
AluI	AGCT	8 cut(s)	172, 284, 481, 714, 778, 1097, 1151, 1397
Alw21I	GWGCWC	2 cut(s)	1257, 1381
Alw26I	GTCTC	1 cut(s)	969
AlwI	GGATC	7 cut(s)	314, 327, 659, 903, 1161, 1174, 1450
AlwNI	CAGNNNCTG	1 cut(s)	100
Ama87I	CYCGRG	1 cut(s)	1400
AoxI	GGCC	2 cut(s)	921, 1138
ApeKI	GCWGC	2 cut(s)	714, 833
ApoI	RAATTY	7 cut(s)	113, 583, 803, 1158, 1296, 1539, 1686
Asp700I	GAANNNNTTC	3 cut(s)	1047, 1412, 1479
AspLEI	GCGC	1 cut(s)	111
AspS9I	GGNCC	1 cut(s)	1138
AsuHPI	GGTGA	2 cut(s)	523, 1340
AsuII	TTCGAA	1 cut(s)	1752
AvaI	CYCGRG	1 cut(s)	1400
BamHI	GGATCC	2 cut(s)	319, 1166
BbsI	GAAGAC	1 cut(s)	144
Bbv12I	GWGCWC	2 cut(s)	1257, 1381
BbvI	GCAGC	2 cut(s)	701, 845
BccI	CCATC	6 cut(s)	212, 559, 611, 987, 1265, 1381
BciT130I	CCWGG	3 cut(s)	241, 1136, 1506
BclI	TGATCA	3 cut(s)	1234, 1609, 1783
BcoDI	GTCTC	1 cut(s)	969
BfaI	CTAG	6 cut(s)	285, 672, 911, 972, 1190, 1797
BglI	GCCNNNNNGGC	1 cut(s)	929
BisI	GCNGC	2 cut(s)	715, 834
BlsI	GCNGC	2 cut(s)	716, 835
BmcAI	AGTACT	1 cut(s)	1551
Bme1390I	CCNGG	3 cut(s)	241, 1136, 1506
BmeT110I	CYCGRG	1 cut(s)	1400
BmgBI	CACGTC	1 cut(s)	12
BmgT120I	GGNCC	1 cut(s)	1138
BmiI	GGNNCC	3 cut(s)	321, 544, 1168
BmrFI	CCNGG	3 cut(s)	241, 1136, 1506
BmsI	GCATC	4 cut(s)	406, 1434, 1537, 1565
BpiI	GAAGAC	1 cut(s)	144
BplI	GAGNNNNNCTC	2 cut(s)	1696, 1728
Bpu14I	TTCGAA	1 cut(s)	1752
BpuEI	CTTGAG	2 cut(s)	1012, 1762
Bsa29I	ATCGAT	1 cut(s)	486
BsaBI	GATNNNNATC	2 cut(s)	318, 894
BsaI	GGTCTC	1 cut(s)	969
BsaJI	CCNNGG	3 cut(s)	363, 918, 1135
BsaWI	WCCGGW	1 cut(s)	604
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	1 cut(s)	1465
Bse118I	RCCGGY	1 cut(s)	301
Bse1I	ACTGG	1 cut(s)	941
Bse8I	GATNNNNATC	2 cut(s)	318, 894
BseBI	CCWGG	3 cut(s)	241, 1136, 1506
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	3 cut(s)	363, 918, 1135
BseGI	GGATG	8 cut(s)	233, 256, 520, 570, 1312, 1556, 1707, 1816
BseJI	GATNNNNATC	2 cut(s)	318, 894
BseLI	CCNNNNNNNGG	1 cut(s)	1465
BseMII	CTCAG	5 cut(s)	35, 156, 167, 462, 1664
BseNI	ACTGG	1 cut(s)	941
BseRI	GAGGAG	2 cut(s)	9, 1418
BseXI	GCAGC	2 cut(s)	701, 845
BsgI	GTGCAG	1 cut(s)	527
BshFI	GGCC	2 cut(s)	923, 1140
BshVI	ATCGAT	1 cut(s)	486
BsiHKAI	GWGCWC	2 cut(s)	1257, 1381
BsiHKCI	CYCGRG	1 cut(s)	1400
BsiSI	CCGG	3 cut(s)	302, 605, 924
BslFI	GGGAC	2 cut(s)	361, 1482
BslI	CCNNNNNNNGG	1 cut(s)	1465
BsmAI	GTCTC	1 cut(s)	969
BsmFI	GGGAC	2 cut(s)	361, 1482
BsmI	GAATGC	1 cut(s)	278
BsnI	GGCC	2 cut(s)	923, 1140
Bso31I	GGTCTC	1 cut(s)	969
BsoBI	CYCGRG	1 cut(s)	1400
Bsp119I	TTCGAA	1 cut(s)	1752
Bsp1286I	GDGCHC	2 cut(s)	1257, 1381
Bsp1407I	TGTACA	1 cut(s)	1014
Bsp19I	CCATGG	1 cut(s)	363
BspACI	CCGC	5 cut(s)	103, 324, 639, 648, 831
BspANI	GGCC	2 cut(s)	923, 1140
BspCNI	CTCAG	5 cut(s)	36, 157, 168, 463, 1665
BspDI	ATCGAT	1 cut(s)	486
BspHI	TCATGA	1 cut(s)	1612
BspLI	GGNNCC	3 cut(s)	321, 544, 1168
BspPI	GGATC	7 cut(s)	314, 327, 659, 903, 1161, 1174, 1450
BspT104I	TTCGAA	1 cut(s)	1752
BspTNI	GGTCTC	1 cut(s)	969
BsrFI	RCCGGY	1 cut(s)	301
BsrGI	TGTACA	1 cut(s)	1014
BsrI	ACTGG	1 cut(s)	941
BssAI	RCCGGY	1 cut(s)	301
BssECI	CCNNGG	3 cut(s)	363, 918, 1135
BssT1I	CCWWGG	1 cut(s)	363
Bst2UI	CCWGG	3 cut(s)	241, 1136, 1506
Bst4CI	ACNGT	4 cut(s)	258, 295, 1118, 1436
Bst6I	CTCTTC	2 cut(s)	1286, 1482
BstAUI	TGTACA	1 cut(s)	1014
BstBI	TTCGAA	1 cut(s)	1752
BstDEI	CTNAG	7 cut(s)	44, 165, 176, 471, 598, 1358, 1673
BstDSI	CCRYGG	2 cut(s)	363, 918
BstF5I	GGATG	8 cut(s)	233, 256, 520, 570, 1312, 1556, 1707, 1816
BstHHI	GCGC	1 cut(s)	111
BstMAI	GTCTC	1 cut(s)	969
BstMWI	GCNNNNNNNGC	4 cut(s)	645, 775, 929, 1031
BstNI	CCWGG	3 cut(s)	241, 1136, 1506
BstNSI	RCATGY	1 cut(s)	1317
BstSCI	CCNGG	3 cut(s)	239, 1134, 1504
BstV1I	GCAGC	2 cut(s)	701, 845
BstV2I	GAAGAC	1 cut(s)	144
BstX2I	RGATCY	2 cut(s)	319, 1166
BstYI	RGATCY	2 cut(s)	319, 1166
Bsu15I	ATCGAT	1 cut(s)	486
BsuRI	GGCC	2 cut(s)	923, 1140
BsuTUI	ATCGAT	1 cut(s)	486
BtgI	CCRYGG	2 cut(s)	363, 918
BtrI	CACGTC	1 cut(s)	12
BtsCI	GGATG	8 cut(s)	233, 256, 520, 570, 1312, 1556, 1707, 1816
CaiI	CAGNNNCTG	1 cut(s)	100
CciI	TCATGA	1 cut(s)	1612
CfoI	GCGC	1 cut(s)	111
Cfr10I	RCCGGY	1 cut(s)	301
Cfr13I	GGNCC	1 cut(s)	1138
ClaI	ATCGAT	1 cut(s)	486
CseI	GACGC	1 cut(s)	1521
CsiI	ACCWGGT	1 cut(s)	239
Csp6I	GTAC	5 cut(s)	518, 1015, 1206, 1550, 1569
CviQI	GTAC	5 cut(s)	518, 1015, 1206, 1550, 1569
DdeI	CTNAG	7 cut(s)	44, 165, 176, 471, 598, 1358, 1673
DraIII	CACNNNGTG	1 cut(s)	243
EaeI	YGGCCR	1 cut(s)	921
Eam1104I	CTCTTC	2 cut(s)	1286, 1482
EarI	CTCTTC	2 cut(s)	1286, 1482
Eco130I	CCWWGG	1 cut(s)	363
Eco31I	GGTCTC	1 cut(s)	969
Eco57I	CTGAAG	1 cut(s)	1110
Eco88I	CYCGRG	1 cut(s)	1400
EcoRII	CCWGG	3 cut(s)	239, 1134, 1504
EcoT14I	CCWWGG	1 cut(s)	363
EcoT22I	ATGCAT	2 cut(s)	278, 1449
ErhI	CCWWGG	1 cut(s)	363
FalI	AAGNNNNNCTT	4 cut(s)	1479, 1511, 1575, 1607
FaqI	GGGAC	2 cut(s)	361, 1482
FauI	CCCGC	2 cut(s)	331, 641
FauNDI	CATATG	1 cut(s)	984
FbaI	TGATCA	3 cut(s)	1234, 1609, 1783
FblI	GTMKAC	3 cut(s)	14, 393, 1510
Fnu4HI	GCNGC	2 cut(s)	715, 834
FokI	GGATG	7 cut(s)	220, 263, 507, 577, 1319, 1543, 1714
Fsp4HI	GCNGC	2 cut(s)	715, 834
FspBI	CTAG	6 cut(s)	285, 672, 911, 972, 1190, 1797
GlaI	GCGC	1 cut(s)	110
GluI	GCNGC	2 cut(s)	715, 834
HaeIII	GGCC	2 cut(s)	923, 1140
HapII	CCGG	3 cut(s)	302, 605, 924
HgaI	GACGC	1 cut(s)	1521
HhaI	GCGC	1 cut(s)	111
Hin6I	GCGC	1 cut(s)	109
HinP1I	GCGC	1 cut(s)	109
HincII	GTYRAC	1 cut(s)	1511
HindII	GTYRAC	1 cut(s)	1511
HindIII	AAGCTT	1 cut(s)	1095
HpaII	CCGG	3 cut(s)	302, 605, 924
HphI	GGTGA	2 cut(s)	523, 1340
Hpy166II	GTNNAC	5 cut(s)	15, 394, 450, 1331, 1511
Hpy8I	GTNNAC	5 cut(s)	15, 394, 450, 1331, 1511
Hpy99I	CGWCG	2 cut(s)	137, 1515
HpyAV	CCTTC	4 cut(s)	790, 1577, 1663, 1718
HpyCH4III	ACNGT	4 cut(s)	258, 295, 1118, 1436
HpyCH4IV	ACGT	1 cut(s)	11
HpyCH4V	TGCA	9 cut(s)	182, 276, 356, 403, 508, 725, 769, 859, 1447
HpyF10VI	GCNNNNNNNGC	4 cut(s)	645, 775, 929, 1031
HpyF3I	CTNAG	7 cut(s)	44, 165, 176, 471, 598, 1358, 1673
HpySE526I	ACGT	1 cut(s)	11
HspAI	GCGC	1 cut(s)	109
Ksp22I	TGATCA	3 cut(s)	1234, 1609, 1783
LmnI	GCTCC	2 cut(s)	177, 1339
Lsp1109I	GCAGC	2 cut(s)	701, 845
LweI	GCATC	4 cut(s)	406, 1434, 1537, 1565
MabI	ACCWGGT	1 cut(s)	239
MaeI	CTAG	6 cut(s)	285, 672, 911, 972, 1190, 1797
MaeII	ACGT	1 cut(s)	11
MboII	GAAGA	9 cut(s)	149, 200, 274, 866, 1103, 1303, 1499, 1643, 1721
MfeI	CAATTG	2 cut(s)	341, 1578
MflI	RGATCY	2 cut(s)	319, 1166
MhlI	GDGCHC	2 cut(s)	1257, 1381
MlyI	GAGTC	2 cut(s)	658, 923
MmeI	TCCRAC	4 cut(s)	358, 1043, 1137, 1389
Mph1103I	ATGCAT	2 cut(s)	278, 1449
MroXI	GAANNNNTTC	3 cut(s)	1047, 1412, 1479
MseI	TTAA	6 cut(s)	387, 422, 846, 1155, 1215, 1418
MslI	CAYNNNNRTG	1 cut(s)	1080
MspI	CCGG	3 cut(s)	302, 605, 924
MspR9I	CCNGG	3 cut(s)	241, 1136, 1506
MunI	CAATTG	2 cut(s)	341, 1578
Mva1269I	GAATGC	1 cut(s)	278
MvaI	CCWGG	3 cut(s)	241, 1136, 1506
MwoI	GCNNNNNNNGC	4 cut(s)	645, 775, 929, 1031
NcoI	CCATGG	1 cut(s)	363
NdeI	CATATG	1 cut(s)	984
NlaIV	GGNNCC	3 cut(s)	321, 544, 1168
NsiI	ATGCAT	2 cut(s)	278, 1449
NspI	RCATGY	1 cut(s)	1317
NspV	TTCGAA	1 cut(s)	1752
PaeR7I	CTCGAG	1 cut(s)	1400
PagI	TCATGA	1 cut(s)	1612
PctI	GAATGC	1 cut(s)	278
PdmI	GAANNNNTTC	3 cut(s)	1047, 1412, 1479
PfeI	GAWTC	8 cut(s)	191, 265, 569, 957, 1348, 1616, 1642, 1736
PflFI	GACNNNGTC	1 cut(s)	1515
PflMI	CCANNNNNTGG	1 cut(s)	1465
PkrI	GCNGC	2 cut(s)	716, 835
PleI	GAGTC	2 cut(s)	658, 922
PpsI	GAGTC	2 cut(s)	658, 922
PsiI	TTATAA	1 cut(s)	867
Psp6I	CCWGG	3 cut(s)	239, 1134, 1504
PspGI	CCWGG	3 cut(s)	239, 1134, 1504
PspN4I	GGNNCC	3 cut(s)	321, 544, 1168
PspPI	GGNCC	1 cut(s)	1138
PsrI	GAACNNNNNNTAC	2 cut(s)	807, 839
PstNI	CAGNNNCTG	1 cut(s)	100
PsuI	RGATCY	2 cut(s)	319, 1166
PsyI	GACNNNGTC	1 cut(s)	1515
RsaI	GTAC	5 cut(s)	519, 1016, 1207, 1551, 1570
RsaNI	GTAC	5 cut(s)	518, 1015, 1206, 1550, 1569
RseI	CAYNNNNRTG	1 cut(s)	1080
SalI	GTCGAC	1 cut(s)	1509
SaqAI	TTAA	6 cut(s)	387, 422, 846, 1155, 1215, 1418
SatI	GCNGC	2 cut(s)	715, 834
Sau96I	GGNCC	1 cut(s)	1138
ScaI	AGTACT	1 cut(s)	1551
SchI	GAGTC	2 cut(s)	658, 923
ScrFI	CCNGG	3 cut(s)	241, 1136, 1506
SduI	GDGCHC	2 cut(s)	1257, 1381
SexAI	ACCWGGT	1 cut(s)	239
SfaNI	GCATC	4 cut(s)	406, 1434, 1537, 1565
Sfr274I	CTCGAG	1 cut(s)	1400
SfuI	TTCGAA	1 cut(s)	1752
SlaI	CTCGAG	1 cut(s)	1400
SmiMI	CAYNNNNRTG	1 cut(s)	1080
SmlI	CTYRAG	3 cut(s)	1027, 1400, 1741
SmoI	CTYRAG	3 cut(s)	1027, 1400, 1741
SsiI	CCGC	5 cut(s)	103, 324, 639, 648, 831
SspI	AATATT	1 cut(s)	1130
SspMI	CTAG	6 cut(s)	285, 672, 911, 972, 1190, 1797
StyD4I	CCNGG	3 cut(s)	239, 1134, 1504
StyI	CCWWGG	1 cut(s)	363
TaaI	ACNGT	4 cut(s)	258, 295, 1118, 1436
TaiI	ACGT	1 cut(s)	14
TaqI	TCGA	6 cut(s)	486, 819, 898, 1401, 1510, 1752
TatI	WGTACW	3 cut(s)	1014, 1205, 1549
TfiI	GAWTC	8 cut(s)	191, 265, 569, 957, 1348, 1616, 1642, 1736
Tru1I	TTAA	6 cut(s)	387, 422, 846, 1155, 1215, 1418
Tru9I	TTAA	6 cut(s)	387, 422, 846, 1155, 1215, 1418
TseI	GCWGC	2 cut(s)	714, 833
TspGWI	ACGGA	1 cut(s)	907
Tth111I	GACNNNGTC	1 cut(s)	1515
Van91I	CCANNNNNTGG	1 cut(s)	1465
XapI	RAATTY	7 cut(s)	113, 583, 803, 1158, 1296, 1539, 1686
XbaI	TCTAGA	1 cut(s)	1189
XceI	RCATGY	1 cut(s)	1317
XcmI	CCANNNNNNNNNTGG	2 cut(s)	244, 553
XhoI	CTCGAG	1 cut(s)	1400
XmiI	GTMKAC	3 cut(s)	14, 393, 1510
XmnI	GAANNNNTTC	3 cut(s)	1047, 1412, 1479
XspI	CTAG	6 cut(s)	285, 672, 911, 972, 1190, 1797
ZrmI	AGTACT	1 cut(s)	1551
Zsp2I	ATGCAT	2 cut(s)	278, 1449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.