Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0013916

Physical Location & Seq

Genomic Coordinates Reverse (-)

39843134 .. 39845026

Gene Structure 1893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0252400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGACGTCAGAAAGCTATCCGCGATGGAGAACACCACCAAGGCAGGCAAGACCATGAAACAGAAAGTCAAGTTTGTCGTCGACGAGGAAGTGGCAAAGGTTTCAGACGCCTTGCCTCTGCCTCTGTACATAACCAACGCCGTCTTCTTCGCTCTCTTCTTCTCCGTCGTCTACTTCTTGCTCACTAGCTGGCGTGAGAAGATCCGTACCAACACTCCTCTTCACAACATAGATCTCTCTGAGATTGTTGCCATCCTTGCTCTTATAGCCTCCTTCATCTATCTCCTCGGCTTCTTCGGCATCGATTTTGTTCAGTCCCTCTTTCTCCAACCCAGTAATGACATCTGGGCCGCCGACGATGACGAGGAAGAGATTATTCTCAAGCAGGATGCTCGTAAATTTCCTTGTGGCGAGGCACTTGATTACTCAATCCCAAAAATGGCTCCAATTGCTTCTCCTAAATTCGTCCAAAAGGTGTTTGATGACAAGCCAGCGATCCAGACCCCTCCACCAACCGCAGAAGACGAGGAGATTATCAAGGCTGTCGTTGCTGGAACCATTCCTTCATATTCACTCGAGTCAAAGCTAGGCGACTGCAAGAGGGCAGCTTCTGTTAGGCGTGAGGCATTACAGAGAGTTACAGGCAAGTCTTTTGAGGGTCTGCCCTTGGAGGGCTTTGATTACGAATCCATTTTGGGTCAATGCTGTGAAATGCCGGTTGGGTATATTACCATTCCTGTTGGGATTGCCGGGCCCCTTATGCTTGATGGAAGAGAGTTCTTTGTCCCTATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAAGCAATTAACTTGTCCGGTGGAGCTACTAGTGTGCTATTGAAAGATGGAATGACCAGAGCACCTGTAGTCAGATTCAACTCTGCTAAAAGAGCTGCTGAGTTGAAGTTCTTCATGGAAGACCCTGCCAATTACGAAACCATTTCCATGATTTTCAACAAATCAAGCAGATTTGGTAGACTTCAGACAGTCAAGTGTGCAGTGGCTGGGAAGAACCTCTACATGAGATTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGGGTTCAAAATGTCCTCGACTTCCTTCAGAATGACTTCCCTGAAATGGATGTAATTGGCATCTCTAGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTGAACTGGATTGAAGGCCGTGGCAAATCTGTGGTTTGTGAGGCTGTAATCAAGGGAGACATAGTGAGTAAGGTGTTGAAAACCAACGTGGCGGCCTTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGTTCCGCCATTGCTGGTGCTCTTGGTGGTTTCAATGCTCATGCCAGTAACATTGTTTCAGCTGTGTACCTCGCCACTGGTCAAGACCCAGCTCAGAACATAGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCGGTTACCATGCCTTCTATTGAGGTCGGTACAGTAGGAGGAGGTACCCAATTGGCATCGCAGTCGGCTTGCTTGAACTTGCTCGGAGTGAAGGGTGCCAACAGAGAGGCACCAGGATCAAACGCAAGGCAATTGGCCAGTGTTGTAGCTGGTTCTGTTCTTGCCGGAGAGCTTTCTCTCATGTCTGCTATTGCAGCTGGACAGCTCGTCAAGAGTCACATGAAGTATAACCGATCAAACAAAGATGTTACAACTGTTGCTTCATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003839 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006518 GO:0006575 GO:0006749 GO:0006751 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016829 GO:0016840 GO:0016842 GO:0034641 GO:0042219 GO:0043171 GO:0043603 GO:0044237 GO:0044248 GO:0044273 GO:0044424 GO:0044444 GO:0044464 GO:0051186 GO:0051187 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ChaC

Protein Analysis

590

Amino Acids

63.47

Weight (kDa)

6.1

Isoelectric Point (pI)

34.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	203 - 579	5.6e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44790
fragaria_vesca	FvH4_2g26710
malus_domestica	MD00G1157300.v1.1
prunus_persica	Prupe.1G500300_v2.0.a1
pyrus_communis	pycom12654g00130
rosa_chinensis	RchiOBHm_Chr6g0295581
rosa_laevigata	RLG00000011787
rosa_multiflora	Rmu_sc0005000.1_g000008
rosa_roxburghii	Rroxscaffold_7G00172350
rosa_rugosa	Rorug06G0252200 Rorug06G0252300 Rorug06G0252400
rosa_samantha	Rh6AG365400 Rh6BG373600 Rh6CG379900 Rh6DG366500
rosa_wichuraiana	Rw6G031900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	9
Acc65I	GGTACC	1 cut(s)	1547
AccB1I	GGYRCC	3 cut(s)	1547, 1598, 1612
AccI	GTMKAC	3 cut(s)	81, 171, 1015
AccII	CGCG	1 cut(s)	23
AciI	CCGC	5 cut(s)	21, 351, 516, 1304, 1347
AclWI	GGATC	4 cut(s)	196, 490, 1500, 1627
AcoI	YGGCCR	2 cut(s)	792, 1638
AcsI	RAATTY	2 cut(s)	398, 461
AcuI	CTGAAG	3 cut(s)	822, 1004, 1124
AcyI	GRCGYC	2 cut(s)	6, 108
AfaI	GTAC	6 cut(s)	128, 208, 823, 1409, 1534, 1549
AfiI	CCNNNNNNNGG	3 cut(s)	439, 671, 1159
AgsI	TTSAA	9 cut(s)	880, 916, 943, 994, 1121, 1226, 1291, 1375, 1579
AhdI	GACNNNNNGTC	1 cut(s)	1709
AhlI	ACTAGT	1 cut(s)	866
AjiI	CACGTC	1 cut(s)	1501
AjnI	CCWGG	1 cut(s)	1615
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 702, 734
Alw21I	GWGCWC	2 cut(s)	901, 1363
Alw26I	GTCTC	3 cut(s)	1111, 1263, 1507
AlwI	GGATC	4 cut(s)	196, 490, 1500, 1627
AlwNI	CAGNNNCTG	2 cut(s)	611, 1043
Ama87I	CYCGRG	1 cut(s)	575
AoxI	GGCC	6 cut(s)	348, 752, 792, 1228, 1305, 1638
ApaI	GGGCCC	1 cut(s)	756
ApeKI	GCWGC	6 cut(s)	605, 932, 1071, 1074, 1208, 1697
ApoI	RAATTY	2 cut(s)	398, 461
Asp700I	GAANNNNTTC	2 cut(s)	947, 1148
Asp718I	GGTACC	1 cut(s)	1547
AspS9I	GGNCC	3 cut(s)	348, 752, 753
AsuC2I	CCSGG	1 cut(s)	751
AsuHPI	GGTGA	2 cut(s)	1094, 1453
AvaI	CYCGRG	1 cut(s)	575
BaeGI	GKGCMC	1 cut(s)	756
BalI	TGGCCA	2 cut(s)	794, 1640
BanI	GGYRCC	3 cut(s)	1547, 1598, 1612
BanII	GRGCYC	1 cut(s)	756
BarI	GAAGNNNNNNTAC	2 cut(s)	1040, 1072
BbsI	GAAGAC	3 cut(s)	136, 528, 963
Bbv12I	GWGCWC	2 cut(s)	901, 1363
BbvI	GCAGC	6 cut(s)	617, 919, 1058, 1086, 1195, 1709
BccI	CCATC	7 cut(s)	19, 260, 761, 878, 1462, 1478, 1484
BceAI	ACGGC	2 cut(s)	125, 1215
BcgI	CGANNNNNNTGC	4 cut(s)	374, 408, 1548, 1582
BciT130I	CCWGG	1 cut(s)	1617
BcnI	CCSGG	1 cut(s)	751
BcoDI	GTCTC	3 cut(s)	1111, 1263, 1507
BcuI	ACTAGT	1 cut(s)	866
BfaI	CTAG	5 cut(s)	186, 587, 819, 867, 1179
BfmI	CTRYAG	2 cut(s)	903, 1072
BglII	AGATCT	1 cut(s)	232
BisI	GCNGC	8 cut(s)	351, 606, 933, 1072, 1075, 1209, 1305, 1698
BlsI	GCNGC	8 cut(s)	352, 607, 934, 1073, 1076, 1210, 1306, 1699
Bme1390I	CCNGG	2 cut(s)	751, 1617
BmeRI	GACNNNNNGTC	1 cut(s)	1709
BmeT110I	CYCGRG	1 cut(s)	575
BmgBI	CACGTC	1 cut(s)	1501
BmgT120I	GGNCC	3 cut(s)	348, 752, 753
BmiI	GGNNCC	8 cut(s)	444, 556, 754, 755, 1345, 1549, 1600, 1614
BmrFI	CCNGG	2 cut(s)	751, 1617
BmrI	ACTGGG	1 cut(s)	327
BmsI	GCATC	5 cut(s)	309, 379, 1075, 1182, 1568
BmuI	ACTGGG	1 cut(s)	327
BpiI	GAAGAC	3 cut(s)	136, 528, 963
BpuEI	CTTGAG	2 cut(s)	365, 1313
BpuMI	CCSGG	1 cut(s)	751
Bsa29I	ATCGAT	1 cut(s)	303
BsaHI	GRCGYC	2 cut(s)	6, 108
BsaI	GGTCTC	1 cut(s)	1111
BsaJI	CCNNGG	6 cut(s)	39, 286, 666, 829, 1231, 1308
BsaWI	WCCGGW	1 cut(s)	854
BsaXI	ACNNNNNCTCC	4 cut(s)	199, 229, 1260, 1290
Bsc4I	CCNNNNNNNGG	3 cut(s)	439, 671, 1159
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	7 cut(s)	333, 1084, 1223, 1345, 1386, 1423, 1641
Bse3DI	GCAATG	1 cut(s)	1350
BseBI	CCWGG	1 cut(s)	1617
BseCI	ATCGAT	1 cut(s)	303
BseDI	CCNNGG	6 cut(s)	39, 286, 666, 829, 1231, 1308
BseGI	GGATG	4 cut(s)	252, 394, 1101, 1168
BseLI	CCNNNNNNNGG	3 cut(s)	439, 671, 1159
BseMI	GCAATG	1 cut(s)	1350
BseMII	CTCAG	4 cut(s)	231, 927, 1206, 1448
BseNI	ACTGG	7 cut(s)	333, 1084, 1223, 1345, 1386, 1423, 1641
BseRI	GAGGAG	4 cut(s)	207, 275, 542, 1557
BseSI	GKGCMC	1 cut(s)	756
BseXI	GCAGC	6 cut(s)	617, 919, 1058, 1086, 1195, 1709
BseYI	CCCAGC	2 cut(s)	1043, 1429
BsgI	GTGCAG	1 cut(s)	1056
Bsh1236I	CGCG	1 cut(s)	23
BshFI	GGCC	6 cut(s)	350, 754, 794, 1230, 1307, 1640
BshNI	GGYRCC	3 cut(s)	1547, 1598, 1612
BshVI	ATCGAT	1 cut(s)	303
BsiHKAI	GWGCWC	2 cut(s)	901, 1363
BsiHKCI	CYCGRG	1 cut(s)	575
BsiSI	CCGG	4 cut(s)	716, 750, 855, 1668
BslFI	GGGAC	2 cut(s)	301, 770
BslI	CCNNNNNNNGG	3 cut(s)	439, 671, 1159
BsmAI	GTCTC	3 cut(s)	1111, 1263, 1507
BsmBI	CGTCTC	1 cut(s)	1507
BsmFI	GGGAC	2 cut(s)	301, 770
BsnI	GGCC	6 cut(s)	350, 754, 794, 1230, 1307, 1640
Bso31I	GGTCTC	1 cut(s)	1111
BsoBI	CYCGRG	1 cut(s)	575
Bsp120I	GGGCCC	1 cut(s)	752
Bsp1286I	GDGCHC	3 cut(s)	756, 901, 1363
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
BspACI	CCGC	5 cut(s)	21, 351, 516, 1304, 1347
BspANI	GGCC	6 cut(s)	350, 754, 794, 1230, 1307, 1640
BspCNI	CTCAG	4 cut(s)	232, 928, 1205, 1447
BspDI	ATCGAT	1 cut(s)	303
BspFNI	CGCG	1 cut(s)	23
BspLI	GGNNCC	8 cut(s)	444, 556, 754, 755, 1345, 1549, 1600, 1614
BspMAI	CTGCAG	1 cut(s)	1076
BspPI	GGATC	4 cut(s)	196, 490, 1500, 1627
BspT107I	GGYRCC	3 cut(s)	1547, 1598, 1612
BspTNI	GGTCTC	1 cut(s)	1111
BsrDI	GCAATG	1 cut(s)	1350
BsrFI	RCCGGY	1 cut(s)	715
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	7 cut(s)	333, 1084, 1223, 1345, 1386, 1423, 1641
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	6 cut(s)	39, 286, 666, 829, 1231, 1308
BssMI	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
BssNI	GRCGYC	2 cut(s)	6, 108
BssT1I	CCWWGG	3 cut(s)	39, 666, 1308
Bst2UI	CCWGG	1 cut(s)	1617
Bst4CI	ACNGT	5 cut(s)	830, 1027, 1457, 1537, 1759
Bst6I	CTCTTC	4 cut(s)	161, 225, 363, 766
BstACI	GRCGYC	2 cut(s)	6, 108
BstAUI	TGTACA	1 cut(s)	126
BstC8I	GCNNGC	5 cut(s)	46, 191, 492, 1206, 1573
BstDEI	CTNAG	4 cut(s)	240, 936, 1192, 1434
BstDSI	CCRYGG	2 cut(s)	829, 1231
BstEII	GGTNACC	1 cut(s)	1507
BstF5I	GGATG	4 cut(s)	252, 394, 1101, 1168
BstFNI	CGCG	1 cut(s)	23
BstKTI	GATC	6 cut(s)	204, 235, 498, 1495, 1622, 1739
BstMAI	GTCTC	3 cut(s)	1111, 1263, 1507
BstMBI	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
BstMWI	GCNNNNNNNGC	9 cut(s)	257, 266, 297, 449, 548, 760, 929, 1324, 1697
BstNI	CCWGG	1 cut(s)	1617
BstNSI	RCATGY	1 cut(s)	1327
BstPI	GGTNACC	1 cut(s)	1507
BstSCI	CCNGG	2 cut(s)	749, 1615
BstSFI	CTRYAG	2 cut(s)	903, 1072
BstSLI	GKGCMC	1 cut(s)	756
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	6 cut(s)	617, 919, 1058, 1086, 1195, 1709
BstV2I	GAAGAC	3 cut(s)	136, 528, 963
BstX2I	RGATCY	3 cut(s)	201, 232, 1492
BstYI	RGATCY	3 cut(s)	201, 232, 1492
Bsu15I	ATCGAT	1 cut(s)	303
BsuRI	GGCC	6 cut(s)	350, 754, 794, 1230, 1307, 1640
BsuTUI	ATCGAT	1 cut(s)	303
BtgI	CCRYGG	2 cut(s)	829, 1231
BtgZI	GCGATG	2 cut(s)	38, 1545
BtrI	CACGTC	1 cut(s)	1501
BtsCI	GGATG	4 cut(s)	252, 394, 1101, 1168
BtsI	GCAGTG	1 cut(s)	1044
BtsIMutI	CAGTG	5 cut(s)	1044, 1077, 1416, 1453, 1648
Cac8I	GCNNGC	5 cut(s)	46, 191, 492, 1206, 1573
CaiI	CAGNNNCTG	2 cut(s)	611, 1043
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	3 cut(s)	348, 752, 753
ClaI	ATCGAT	1 cut(s)	303
CseI	GACGC	1 cut(s)	116
Csp6I	GTAC	6 cut(s)	127, 207, 822, 1408, 1533, 1548
CviQI	GTAC	6 cut(s)	127, 207, 822, 1408, 1533, 1548
DdeI	CTNAG	4 cut(s)	240, 936, 1192, 1434
DpnI	GATC	6 cut(s)	203, 234, 497, 1494, 1621, 1738
DpnII	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
DriI	GACNNNNNGTC	1 cut(s)	1709
EaeI	YGGCCR	2 cut(s)	792, 1638
Eam1104I	CTCTTC	4 cut(s)	161, 225, 363, 766
Eam1105I	GACNNNNNGTC	1 cut(s)	1709
EarI	CTCTTC	4 cut(s)	161, 225, 363, 766
EciI	GGCGGA	1 cut(s)	1336
Eco130I	CCWWGG	3 cut(s)	39, 666, 1308
Eco24I	GRGCYC	1 cut(s)	756
Eco31I	GGTCTC	1 cut(s)	1111
Eco57I	CTGAAG	3 cut(s)	822, 1004, 1124
Eco88I	CYCGRG	1 cut(s)	575
Eco91I	GGTNACC	1 cut(s)	1507
EcoO109I	RGGNCCY	1 cut(s)	753
EcoO65I	GGTNACC	1 cut(s)	1507
EcoRII	CCWGG	1 cut(s)	1615
EcoT14I	CCWWGG	3 cut(s)	39, 666, 1308
EcoT38I	GRGCYC	1 cut(s)	756
ErhI	CCWWGG	3 cut(s)	39, 666, 1308
Esp3I	CGTCTC	1 cut(s)	1507
FaqI	GGGAC	2 cut(s)	301, 770
FblI	GTMKAC	3 cut(s)	81, 171, 1015
Fnu4HI	GCNGC	8 cut(s)	351, 606, 933, 1072, 1075, 1209, 1305, 1698
FokI	GGATG	4 cut(s)	239, 401, 1108, 1175
FriOI	GRGCYC	1 cut(s)	756
Fsp4HI	GCNGC	8 cut(s)	351, 606, 933, 1072, 1075, 1209, 1305, 1698
FspBI	CTAG	5 cut(s)	186, 587, 819, 867, 1179
GluI	GCNGC	8 cut(s)	351, 606, 933, 1072, 1075, 1209, 1305, 1698
GsaI	CCCAGC	2 cut(s)	1047, 1433
HaeIII	GGCC	6 cut(s)	350, 754, 794, 1230, 1307, 1640
HapII	CCGG	4 cut(s)	716, 750, 855, 1668
HgaI	GACGC	1 cut(s)	116
Hin1I	GRCGYC	2 cut(s)	6, 108
HincII	GTYRAC	1 cut(s)	82
HindII	GTYRAC	1 cut(s)	82
HinfI	GANTC	5 cut(s)	578, 686, 912, 1065, 1717
HpaII	CCGG	4 cut(s)	716, 750, 855, 1668
HphI	GGTGA	2 cut(s)	1094, 1453
Hpy166II	GTNNAC	5 cut(s)	82, 172, 1016, 1216, 1408
Hpy188I	TCNGA	9 cut(s)	11, 106, 241, 911, 1023, 1143, 1195, 1437, 1589
Hpy188III	TCNNGA	4 cut(s)	499, 1330, 1424, 1714
Hpy8I	GTNNAC	5 cut(s)	82, 172, 1016, 1216, 1408
Hpy99I	CGWCG	4 cut(s)	83, 86, 170, 359
HpyAV	CCTTC	7 cut(s)	283, 573, 797, 1148, 1220, 1527, 1588
HpyCH4III	ACNGT	5 cut(s)	830, 1027, 1457, 1537, 1759
HpyCH4IV	ACGT	3 cut(s)	6, 1299, 1500
HpyCH4V	TGCA	5 cut(s)	597, 837, 1037, 1074, 1697
HpyF10VI	GCNNNNNNNGC	9 cut(s)	257, 266, 297, 449, 548, 760, 929, 1324, 1697
HpyF3I	CTNAG	4 cut(s)	240, 936, 1192, 1434
HpySE526I	ACGT	3 cut(s)	6, 1299, 1500
Hsp92I	GRCGYC	2 cut(s)	6, 108
KpnI	GGTACC	1 cut(s)	1551
Kzo9I	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
LmnI	GCTCC	3 cut(s)	448, 860, 1315
Lsp1109I	GCAGC	6 cut(s)	617, 919, 1058, 1086, 1195, 1709
LweI	GCATC	5 cut(s)	309, 379, 1075, 1182, 1568
MaeI	CTAG	5 cut(s)	186, 587, 819, 867, 1179
MaeII	ACGT	3 cut(s)	6, 1299, 1500
MaeIII	GTNAC	6 cut(s)	637, 1181, 1388, 1507, 1718, 1750
MalI	GATC	6 cut(s)	203, 234, 497, 1494, 1621, 1738
MboI	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
MfeI	CAATTG	3 cut(s)	447, 1553, 1634
MflI	RGATCY	3 cut(s)	201, 232, 1492
MhlI	GDGCHC	3 cut(s)	756, 901, 1363
MlsI	TGGCCA	2 cut(s)	794, 1640
MluCI	AATT	8 cut(s)	398, 447, 461, 843, 967, 1167, 1553, 1634
MluNI	TGGCCA	2 cut(s)	794, 1640
MlyI	GAGTC	2 cut(s)	587, 1726
MmeI	TCCRAC	1 cut(s)	352
Mox20I	TGGCCA	2 cut(s)	794, 1640
MroXI	GAANNNNTTC	2 cut(s)	947, 1148
MscI	TGGCCA	2 cut(s)	794, 1640
MseI	TTAA	3 cut(s)	846, 1320, 1771
MslI	CAYNNNNRTG	2 cut(s)	983, 1466
Msp20I	TGGCCA	2 cut(s)	794, 1640
MspA1I	CMGCKG	2 cut(s)	1403, 1700
MspI	CCGG	4 cut(s)	716, 750, 855, 1668
MspR9I	CCNGG	2 cut(s)	751, 1617
MunI	CAATTG	3 cut(s)	447, 1553, 1634
MvaI	CCWGG	1 cut(s)	1617
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	9 cut(s)	257, 266, 297, 449, 548, 760, 929, 1324, 1697
NciI	CCSGG	1 cut(s)	751
NdeII	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
NlaIV	GGNNCC	8 cut(s)	444, 556, 754, 755, 1345, 1549, 1600, 1614
NmeAIII	GCCGAG	1 cut(s)	267
NmuCI	GTSAC	1 cut(s)	1718
NspI	RCATGY	1 cut(s)	1327
PaeR7I	CTCGAG	1 cut(s)	575
PdmI	GAANNNNTTC	2 cut(s)	947, 1148
PfeI	GAWTC	3 cut(s)	686, 912, 1065
PkrI	GCNGC	8 cut(s)	352, 607, 934, 1073, 1076, 1210, 1306, 1699
PleI	GAGTC	2 cut(s)	586, 1725
PpsI	GAGTC	2 cut(s)	586, 1725
Psp6I	CCWGG	1 cut(s)	1615
PspEI	GGTNACC	1 cut(s)	1507
PspFI	CCCAGC	2 cut(s)	1043, 1429
PspGI	CCWGG	1 cut(s)	1615
PspN4I	GGNNCC	8 cut(s)	444, 556, 754, 755, 1345, 1549, 1600, 1614
PspOMI	GGGCCC	1 cut(s)	752
PspPI	GGNCC	3 cut(s)	348, 752, 753
PspXI	VCTCGAGB	1 cut(s)	575
PstI	CTGCAG	1 cut(s)	1076
PstNI	CAGNNNCTG	2 cut(s)	611, 1043
PsuI	RGATCY	3 cut(s)	201, 232, 1492
PvuII	CAGCTG	2 cut(s)	1403, 1700
RsaI	GTAC	6 cut(s)	128, 208, 823, 1409, 1534, 1549
RsaNI	GTAC	6 cut(s)	127, 207, 822, 1408, 1533, 1548
RseI	CAYNNNNRTG	2 cut(s)	983, 1466
SalI	GTCGAC	1 cut(s)	80
SaqAI	TTAA	3 cut(s)	846, 1320, 1771
SatI	GCNGC	8 cut(s)	351, 606, 933, 1072, 1075, 1209, 1305, 1698
Sau3AI	GATC	6 cut(s)	201, 232, 495, 1492, 1619, 1736
Sau96I	GGNCC	3 cut(s)	348, 752, 753
SchI	GAGTC	2 cut(s)	587, 1726
ScrFI	CCNGG	2 cut(s)	751, 1617
SduI	GDGCHC	3 cut(s)	756, 901, 1363
SfaNI	GCATC	5 cut(s)	309, 379, 1075, 1182, 1568
SfcI	CTRYAG	2 cut(s)	903, 1072
Sfr274I	CTCGAG	1 cut(s)	575
SgrDI	CGTCGACG	1 cut(s)	80
SlaI	CTCGAG	1 cut(s)	575
SmiMI	CAYNNNNRTG	2 cut(s)	983, 1466
SmlI	CTYRAG	3 cut(s)	380, 575, 1328
SmoI	CTYRAG	3 cut(s)	380, 575, 1328
SpeI	ACTAGT	1 cut(s)	866
Sse9I	AATT	8 cut(s)	398, 447, 461, 843, 967, 1167, 1553, 1634
SsiI	CCGC	5 cut(s)	21, 351, 516, 1304, 1347
SspMI	CTAG	5 cut(s)	186, 587, 819, 867, 1179
StyD4I	CCNGG	2 cut(s)	749, 1615
StyI	CCWWGG	3 cut(s)	39, 666, 1308
TaaI	ACNGT	5 cut(s)	830, 1027, 1457, 1537, 1759
TaiI	ACGT	3 cut(s)	9, 1302, 1503
TaqI	TCGA	4 cut(s)	81, 303, 576, 1131
TasI	AATT	8 cut(s)	398, 447, 461, 843, 967, 1167, 1553, 1634
TatI	WGTACW	1 cut(s)	126
TauI	GCSGC	2 cut(s)	353, 1307
TfiI	GAWTC	3 cut(s)	686, 912, 1065
Tru1I	TTAA	3 cut(s)	846, 1320, 1771
Tru9I	TTAA	3 cut(s)	846, 1320, 1771
TscAI	CASTG	5 cut(s)	1044, 1084, 1423, 1460, 1648
TseFI	GTSAC	1 cut(s)	1718
TseI	GCWGC	6 cut(s)	605, 932, 1071, 1074, 1208, 1697
Tsp45I	GTSAC	1 cut(s)	1718
TspDTI	ATGAA	7 cut(s)	71, 265, 555, 940, 1112, 1739, 1755
TspGWI	ACGGA	2 cut(s)	154, 194
TspRI	CASTG	5 cut(s)	1044, 1084, 1423, 1460, 1648
XapI	RAATTY	2 cut(s)	398, 461
XceI	RCATGY	1 cut(s)	1327
XhoI	CTCGAG	1 cut(s)	575
XmiI	GTMKAC	3 cut(s)	81, 171, 1015
XmnI	GAANNNNTTC	2 cut(s)	947, 1148
XspI	CTAG	5 cut(s)	186, 587, 819, 867, 1179
ZraI	GACGTC	1 cut(s)	7

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.