Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006708

Physical Location & Seq

Genomic Coordinates Reverse (-)

43627516 .. 43632040

Gene Structure 4525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0286100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCTGGAGAGCTTGCTGCAGGGGGTGCAGTAGGACTAGCATTTTCTTTGCTGTATGAAGGCGTTAGCACACTTGTCATCAAATCTGAGCAGTTTAAACCCCTTCTCGAAGAGCTCATAGTCACGTTAGACTACTTAAAACCACTGATCAAACAGATAGGAGCTGGTAACAGGGAACTGGATCACCCAAATGAAAGGGTATATTTTGAGAACCAAATGGAGAAGGGCAAGAGGCTCATTGACAAGTTGTCCAAAGTTGGTAGTTGGAATTTGCTCAAGCCTTATTACAGCAATAAGCTTGTTGAATTGGATAGGTCTCTCAGCAAGATGTTGCTGAATCTAATACCGCAGGGAGTAAGGGATGGACAAGATATATTGGTTATGGTAAGGTCTATAGAGCACAAGTTGATCCAAATGGAGCTGCATGGTCAGGTACAAAATCAAAATGCACTTGGTGGTGGTGAAACTAGAGCTACAGAACCTTATCCACCATCTTTCCCAATTGGATTGGATAAGCCTTTAAGGGAACTGAAGATGAAGCTTCTTAACGATGATCGAGTTTCAATGCTTTCGGTCACTGCTCCTGGAGGGTCCGGGAAAACAACTTTGGCCCAAATGTTTTGTCATGATCGGGAAGTCAAAGGTAAGTTCAGCAACAGGATCTTCTTTGCAACTGTTTCGAACAAACCCAAGTTAGATTGGCTGCAAACATCTCTGCAGCAATTTCTAAAGGAAGTAGAAGAAAATGATGCACTGTTGGTCCTGGATGATGTTTGGCCTGACTCATCAGGAACCCTTCTTGAAGAGTTATATCAACTCAGCGAAGGATCAAGTTGCAAGACTCTAGTCACATCAAGATCTTTTCCAAAATATGGTTCTCATTATACTTTAGATCCATTGACAAATGATGAGGCAATGACTCTTCTCAAGAATTCTACATCCCTGGATCATTCCTCTGGTACTTTAGATGAACTTCTGAAACAGATAGTAAAGTACTGTAAGAGATCTCCACTTGCCATTACGGTGGTTGGAAAATCACTTGTCAAGGGTAGTATAGAGATTTGGAAAGAAAAAGTAATAGAATGGTCTAAAAGTCCTTCTATTCTTGATGAGTATGATATTTTGCGTGTCCGCCTCCAAACCAGCTTAGATGTTTTATGTGAAAATAAGCCTATCCTCAAGGAATGTTTCATAGACCTTGCTTCATTTCCCGAAGACGGAAGAATCCCTGCTGGTGTGCTCATTGATATGTGGTCAGAGCTACATGGGCTACATGAAGATGATTTGTCTATTGCGAAACTGCAACACCTCAACAATCATAATCTGGCCAAAATTGTTGTCATAAGCAAGGAGAACGGGTATGTGGATACCTGCTACAGTGAGCAGTTTGTTACGCAGCATGATATGCTTAGAGAGCTGGCATTGCATCAGATCCGTCAGGACCCGGTAGGAGAGAGCAAAAGACTAATTATAGACATATGTGGAGATGATCTTCCGAAACGGTGGACACAAAAGAAGGATAAGCTTAAGGAAACTCGCTTGTTATCTATATCAACTGATGGAGAGTTCTCATCAAAATGGGACCACATGCATCTACCAAAAGCTGAGGTTCTGATTCTGAATTTTCAGACAAAGAACTATACCTTGCCCAAGTTCAATAGCAAAATGTCCAAGGCATTGAAGGTTGTAATAGTCAGAAATAATGGTTTATCACCTGCAGAATTAAGTAATTTAGACCTATTGAGTTCCTTACCTAATCTGAAGAGAGTCAGATTAGAGCGCATTTCCATTTCTTCCATAAGTTTGACCAAAAAGAAGTTGAAAAGTCTGGAGAAGATATCTATGTTCATGTGTAACATTGGTCAACCTTCTAGCAACAATTCCATCCAATTTTTTGAGGCATTGCCAAATCTTTTGGAGATAAACATCGACTATAGCAATGATTTGAAGGAATTGCCTGCTGAACTCTGTGATCTTAAGTACCTAAAGAAGCTTGTTATCACCAACTGCCATAACCTATCTGCCTTGCCTGAAGAGATTGGAAACCTGAGCAAGTTAGAAGTCCTAAGGCTACGGTCTTGCACAATGCTGGAAACTTTAAAGGACTCAATTACGAACTTCAAGAACCTAACCTTTCTCGACATATCTGATTGCTTCAGCATTAAGGAGTTGCCTGAAGACATTGGTCAGCTGTGCAAATTAAAGACGATCAACATGAGACAGTGCACCAGATTGCAGGGGCTACCTACAACAATCTGGGATCTTGAGAATATATTAGAGGAAGTGATATGTGATGAAGAGACAGAAGAGTTATGGGAACCTTTCAAAATGATCAAAAACTTGCGCATAACAATGGTCAAAGAAGAATTCAACCTACGTTGGCTCCATGGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SKA2

Protein Analysis

798

Amino Acids

90.71

Weight (kDa)

6.1

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	4 - 136	1.8e-19	Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC	PF00931	172 - 246	5.6e-07	NB-ARC domain
LRR_14	PF23598	646 - 714	2e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24970
fragaria_vesca	FvH4_2g41341 FvH4_2g41341 FvH4_2g41341
malus_domestica	MD08G1052100.v1.1 MD15G1043400.v1.1
prunus_persica	Prupe.1G396800_v2.0.a1 Prupe.1G396800_v2.0.a1 Prupe.1G396800_v2.0.a1
pyrus_communis	pycom08g04350 pycom15g04030
rosa_chinensis	RchiOBHm_Chr6g0299191 RchiOBHm_Chr7g0186961
rosa_laevigata	RLG00000011455
rosa_multiflora	Rmu_co8351649.1_g000001 Rmu_sc0001434.1_g000013
rosa_roxburghii	Rroxscaffold_7G00168930
rosa_rugosa	Rorug06G0286100
rosa_samantha	Rh6AG397000 Rh6BG405700 Rh6CG411800 Rh6DG398500 Rh7AG083800 Rh7CG084800 Rh7DG085700
rosa_wichuraiana	Rw6G034770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1723
Acc16I	TGCGCA	1 cut(s)	2345
Acc36I	ACCTGC	2 cut(s)	1379, 1723
AccB7I	CCANNNNNTGG	1 cut(s)	872
AciI	CCGC	2 cut(s)	347, 1132
AclWI	GGATC	8 cut(s)	189, 403, 668, 835, 887, 954, 1426, 2268
AcoI	YGGCCR	1 cut(s)	1326
AcsI	RAATTY	4 cut(s)	268, 931, 1621, 2366
AcuI	CTGAAG	5 cut(s)	551, 1781, 2052, 2140, 2196
AdeI	CACNNNGTG	1 cut(s)	455
AfaI	GTAC	4 cut(s)	435, 961, 995, 1982
AfiI	CCNNNNNNNGG	2 cut(s)	872, 1217
AflII	CTTAAG	2 cut(s)	1526, 1976
AhdI	GACNNNNNGTC	1 cut(s)	247
AjnI	CCWGG	3 cut(s)	583, 762, 942
AjuI	GAANNNNNNNTTGG	4 cut(s)	590, 622, 859, 891
Alw21I	GWGCWC	4 cut(s)	117, 402, 1242, 2228
Alw26I	GTCTC	3 cut(s)	321, 2212, 2294
Alw44I	GTGCAC	1 cut(s)	2224
AlwI	GGATC	8 cut(s)	189, 403, 668, 835, 887, 954, 1426, 2268
AoxI	GGCC	3 cut(s)	609, 776, 1326
ApaLI	GTGCAC	1 cut(s)	2224
ApeKI	GCWGC	5 cut(s)	17, 421, 703, 718, 1396
ApoI	RAATTY	4 cut(s)	268, 931, 1621, 2366
ArsI	GACNNNNNNTTYG	4 cut(s)	607, 639, 1323, 1355
AspLEI	GCGC	2 cut(s)	1782, 2346
AspS9I	GGNCC	5 cut(s)	591, 610, 760, 1441, 1582
AsuC2I	CCSGG	2 cut(s)	595, 1445
AsuHPI	GGTGA	4 cut(s)	176, 473, 1704, 1993
AsuII	TTCGAA	1 cut(s)	680
AvaII	GGWCC	4 cut(s)	591, 760, 1441, 1582
AxyI	CCTNAGG	1 cut(s)	2066
BaeGI	GKGCMC	1 cut(s)	2228
BalI	TGGCCA	1 cut(s)	1328
BanII	GRGCYC	1 cut(s)	117
BbsI	GAAGAC	2 cut(s)	1221, 2184
Bbv12I	GWGCWC	4 cut(s)	117, 402, 1242, 2228
BbvCI	CCTCAGC	1 cut(s)	1605
BbvI	GCAGC	5 cut(s)	4, 408, 690, 730, 1408
BccI	CCATC	4 cut(s)	356, 499, 1553, 1892
BcgI	CGANNNNNNTGC	2 cut(s)	660, 694
BciT130I	CCWGG	3 cut(s)	585, 764, 944
BciVI	GTATCC	1 cut(s)	1360
BclI	TGATCA	2 cut(s)	147, 2331
BcnI	CCSGG	2 cut(s)	595, 1445
BcoDI	GTCTC	3 cut(s)	321, 2212, 2294
BfaI	CTAG	4 cut(s)	38, 468, 845, 1872
BfmI	CTRYAG	7 cut(s)	18, 393, 474, 716, 1375, 1716, 1933
BfrI	CTTAAG	2 cut(s)	1526, 1976
BfuAI	ACCTGC	2 cut(s)	1379, 1723
BfuI	GTATCC	1 cut(s)	1360
BglII	AGATCT	2 cut(s)	857, 1004
BisI	GCNGC	5 cut(s)	18, 422, 704, 719, 1397
BlsI	GCNGC	5 cut(s)	19, 423, 705, 720, 1398
BmcAI	AGTACT	1 cut(s)	995
Bme1390I	CCNGG	5 cut(s)	585, 595, 764, 944, 1445
Bme18I	GGWCC	4 cut(s)	591, 760, 1441, 1582
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmgT120I	GGNCC	5 cut(s)	591, 610, 760, 1441, 1582
BmiI	GGNNCC	6 cut(s)	592, 793, 1443, 1583, 2319, 2384
BmrFI	CCNGG	5 cut(s)	585, 595, 764, 944, 1445
BmsI	GCATC	3 cut(s)	739, 1435, 1600
BoxI	GACNNNNGTC	2 cut(s)	845, 2184
BpiI	GAAGAC	2 cut(s)	1221, 2184
BpmI	CTGGAG	3 cut(s)	27, 606, 1850
Bpu10I	CCTNAGC	2 cut(s)	1605, 2048
Bpu14I	TTCGAA	1 cut(s)	680
BpuEI	CTTGAG	4 cut(s)	260, 911, 1163, 2285
BpuMI	CCSGG	2 cut(s)	595, 1445
BsaBI	GATNNNNATC	1 cut(s)	1925
BsaI	GGTCTC	1 cut(s)	321
BsaJI	CCNNGG	3 cut(s)	942, 1671, 2386
BsaXI	ACNNNNNCTCC	4 cut(s)	1343, 1373, 2367, 2397
Bsc4I	CCNNNNNNNGG	2 cut(s)	872, 1217
Bse1I	ACTGG	1 cut(s)	183
Bse21I	CCTNAGG	1 cut(s)	2066
Bse3DI	GCAATG	4 cut(s)	921, 1421, 1901, 1945
Bse8I	GATNNNNATC	1 cut(s)	1925
BseBI	CCWGG	3 cut(s)	585, 764, 944
BseDI	CCNNGG	3 cut(s)	942, 1671, 2386
BseGI	GGATG	4 cut(s)	367, 772, 938, 1884
BseJI	GATNNNNATC	1 cut(s)	1925
BseLI	CCNNNNNNNGG	2 cut(s)	872, 1217
BseMI	GCAATG	4 cut(s)	921, 1421, 1901, 1945
BseMII	CTCAG	5 cut(s)	78, 334, 832, 1596, 2039
BseNI	ACTGG	1 cut(s)	183
BseSI	GKGCMC	1 cut(s)	2228
BseXI	GCAGC	5 cut(s)	4, 408, 690, 730, 1408
BsgI	GTGCAG	1 cut(s)	48
BshFI	GGCC	3 cut(s)	611, 778, 1328
BsiHKAI	GWGCWC	4 cut(s)	117, 402, 1242, 2228
BsiSI	CCGG	2 cut(s)	594, 1445
BslFI	GGGAC	1 cut(s)	1595
BslI	CCNNNNNNNGG	2 cut(s)	872, 1217
BsmAI	GTCTC	3 cut(s)	321, 2212, 2294
BsmFI	GGGAC	1 cut(s)	1595
BsnI	GGCC	3 cut(s)	611, 778, 1328
Bso31I	GGTCTC	1 cut(s)	321
Bsp119I	TTCGAA	1 cut(s)	680
Bsp1286I	GDGCHC	4 cut(s)	117, 402, 1242, 2228
Bsp19I	CCATGG	1 cut(s)	2386
BspACI	CCGC	2 cut(s)	347, 1132
BspANI	GGCC	3 cut(s)	611, 778, 1328
BspCNI	CTCAG	5 cut(s)	79, 333, 831, 1597, 2040
BspHI	TCATGA	1 cut(s)	625
BspLI	GGNNCC	6 cut(s)	592, 793, 1443, 1583, 2319, 2384
BspMAI	CTGCAG	3 cut(s)	22, 720, 1720
BspMI	ACCTGC	2 cut(s)	1379, 1723
BspPI	GGATC	8 cut(s)	189, 403, 668, 835, 887, 954, 1426, 2268
BspQI	GCTCTTC	1 cut(s)	105
BspT104I	TTCGAA	1 cut(s)	680
BspTI	CTTAAG	2 cut(s)	1526, 1976
BspTNI	GGTCTC	1 cut(s)	321
BsrDI	GCAATG	4 cut(s)	921, 1421, 1901, 1945
BsrI	ACTGG	1 cut(s)	183
BssECI	CCNNGG	3 cut(s)	942, 1671, 2386
BssT1I	CCWWGG	2 cut(s)	1671, 2386
Bst2UI	CCWGG	3 cut(s)	585, 764, 944
Bst4CI	ACNGT	8 cut(s)	676, 756, 998, 1024, 1379, 1503, 2076, 2223
Bst6I	CTCTTC	7 cut(s)	105, 798, 927, 1757, 2028, 2292, 2301
BstAFI	CTTAAG	2 cut(s)	1526, 1976
BstAPI	GCANNNNNTGC	2 cut(s)	26, 1405
BstBI	TTCGAA	1 cut(s)	680
BstC8I	GCNNGC	3 cut(s)	15, 1419, 1959
BstDEI	CTNAG	8 cut(s)	87, 320, 818, 1147, 1409, 1605, 2048, 2066
BstDSI	CCRYGG	1 cut(s)	2386
BstF5I	GGATG	4 cut(s)	367, 772, 938, 1884
BstHHI	GCGC	2 cut(s)	1782, 2346
BstMAI	GTCTC	3 cut(s)	321, 2212, 2294
BstMWI	GCNNNNNNNGC	5 cut(s)	26, 1267, 1405, 1414, 1423
BstNI	CCWGG	3 cut(s)	585, 764, 944
BstNSI	RCATGY	1 cut(s)	1591
BstPAI	GACNNNNGTC	2 cut(s)	845, 2184
BstSCI	CCNGG	5 cut(s)	583, 593, 762, 942, 1443
BstSFI	CTRYAG	7 cut(s)	18, 393, 474, 716, 1375, 1716, 1933
BstSLI	GKGCMC	1 cut(s)	2228
BstV1I	GCAGC	5 cut(s)	4, 408, 690, 730, 1408
BstV2I	GAAGAC	2 cut(s)	1221, 2184
BstX2I	RGATCY	6 cut(s)	660, 857, 892, 1004, 1431, 2260
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	6 cut(s)	660, 857, 892, 1004, 1431, 2260
Bsu36I	CCTNAGG	1 cut(s)	2066
BsuI	GTATCC	1 cut(s)	1360
BsuRI	GGCC	3 cut(s)	611, 778, 1328
BtgI	CCRYGG	1 cut(s)	2386
BtsCI	GGATG	4 cut(s)	367, 772, 938, 1884
BtsI	GCAGTG	1 cut(s)	576
BtsIMutI	CAGTG	5 cut(s)	143, 576, 752, 1384, 2228
BveI	ACCTGC	2 cut(s)	1379, 1723
Cac8I	GCNNGC	3 cut(s)	15, 1419, 1959
CciI	TCATGA	1 cut(s)	625
CfoI	GCGC	2 cut(s)	1782, 2346
Cfr13I	GGNCC	5 cut(s)	591, 610, 760, 1441, 1582
Csp6I	GTAC	4 cut(s)	434, 960, 994, 1981
CviAII	CATG	9 cut(s)	425, 626, 1265, 1274, 1400, 1588, 1849, 2215, 2387
CviQI	GTAC	4 cut(s)	434, 960, 994, 1981
DdeI	CTNAG	8 cut(s)	87, 320, 818, 1147, 1409, 1605, 2048, 2066
DraI	TTTAAA	2 cut(s)	97, 2100
DraIII	CACNNNGTG	1 cut(s)	455
DriI	GACNNNNNGTC	1 cut(s)	247
EaeI	YGGCCR	1 cut(s)	1326
Eam1104I	CTCTTC	7 cut(s)	105, 798, 927, 1757, 2028, 2292, 2301
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EarI	CTCTTC	7 cut(s)	105, 798, 927, 1757, 2028, 2292, 2301
EciI	GGCGGA	1 cut(s)	1121
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	2 cut(s)	1671, 2386
Eco24I	GRGCYC	1 cut(s)	117
Eco31I	GGTCTC	1 cut(s)	321
Eco32I	GATATC	1 cut(s)	1839
Eco47I	GGWCC	4 cut(s)	591, 760, 1441, 1582
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	5 cut(s)	551, 1781, 2052, 2140, 2196
Eco81I	CCTNAGG	1 cut(s)	2066
EcoICRI	GAGCTC	1 cut(s)	115
EcoO109I	RGGNCCY	1 cut(s)	1441
EcoRI	GAATTC	2 cut(s)	931, 2366
EcoRII	CCWGG	3 cut(s)	583, 762, 942
EcoRV	GATATC	1 cut(s)	1839
EcoT14I	CCWWGG	2 cut(s)	1671, 2386
EcoT22I	ATGCAT	1 cut(s)	1593
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	2 cut(s)	1671, 2386
FaeI	CATG	9 cut(s)	428, 629, 1268, 1277, 1403, 1591, 1852, 2218, 2390
FaqI	GGGAC	1 cut(s)	1595
FatI	CATG	9 cut(s)	424, 625, 1264, 1273, 1399, 1587, 1848, 2214, 2386
FauNDI	CATATG	1 cut(s)	1478
FbaI	TGATCA	2 cut(s)	147, 2331
Fnu4HI	GCNGC	5 cut(s)	18, 422, 704, 719, 1397
FokI	GGATG	4 cut(s)	374, 779, 925, 1871
FriOI	GRGCYC	1 cut(s)	117
Fsp4HI	GCNGC	5 cut(s)	18, 422, 704, 719, 1397
FspBI	CTAG	4 cut(s)	38, 468, 845, 1872
FspI	TGCGCA	1 cut(s)	2345
GlaI	GCGC	2 cut(s)	1781, 2345
GluI	GCNGC	5 cut(s)	18, 422, 704, 719, 1397
GsuI	CTGGAG	3 cut(s)	27, 606, 1850
HaeIII	GGCC	3 cut(s)	611, 778, 1328
HapII	CCGG	2 cut(s)	594, 1445
HhaI	GCGC	2 cut(s)	1782, 2346
Hin1II	CATG	9 cut(s)	428, 629, 1268, 1277, 1403, 1591, 1852, 2218, 2390
Hin6I	GCGC	2 cut(s)	1780, 2344
HinP1I	GCGC	2 cut(s)	1780, 2344
HincII	GTYRAC	1 cut(s)	1865
HindII	GTYRAC	1 cut(s)	1865
HindIII	AAGCTT	4 cut(s)	296, 539, 1523, 1991
HinfI	GANTC	8 cut(s)	337, 782, 841, 919, 1224, 1615, 1767, 2105
HpaII	CCGG	2 cut(s)	594, 1445
HphI	GGTGA	4 cut(s)	176, 473, 1704, 1993
Hpy166II	GTNNAC	3 cut(s)	1506, 1865, 2226
Hpy8I	GTNNAC	3 cut(s)	1506, 1865, 2226
HpyCH4III	ACNGT	8 cut(s)	676, 756, 998, 1024, 1379, 1503, 2076, 2223
HpyCH4IV	ACGT	2 cut(s)	125, 2377
HpyF10VI	GCNNNNNNNGC	5 cut(s)	26, 1267, 1405, 1414, 1423
HpyF3I	CTNAG	8 cut(s)	87, 320, 818, 1147, 1409, 1605, 2048, 2066
HpySE526I	ACGT	2 cut(s)	125, 2377
Hsp92II	CATG	9 cut(s)	428, 629, 1268, 1277, 1403, 1591, 1852, 2218, 2390
HspAI	GCGC	2 cut(s)	1780, 2344
Ksp22I	TGATCA	2 cut(s)	147, 2331
LguI	GCTCTTC	1 cut(s)	105
LmnI	GCTCC	4 cut(s)	161, 418, 586, 2388
Lsp1109I	GCAGC	5 cut(s)	4, 408, 690, 730, 1408
LweI	GCATC	3 cut(s)	739, 1435, 1600
MaeI	CTAG	4 cut(s)	38, 468, 845, 1872
MaeII	ACGT	2 cut(s)	125, 2377
MaeIII	GTNAC	6 cut(s)	121, 167, 574, 847, 1390, 1853
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	6 cut(s)	660, 857, 892, 1004, 1431, 2260
MhlI	GDGCHC	4 cut(s)	117, 402, 1242, 2228
MlsI	TGGCCA	1 cut(s)	1328
MluNI	TGGCCA	1 cut(s)	1328
MlyI	GAGTC	5 cut(s)	776, 835, 913, 1776, 2099
MmeI	TCCRAC	2 cut(s)	245, 1009
Mox20I	TGGCCA	1 cut(s)	1328
Mph1103I	ATGCAT	1 cut(s)	1593
MscI	TGGCCA	1 cut(s)	1328
MslI	CAYNNNNRTG	6 cut(s)	189, 1022, 1247, 1278, 1576, 2351
Msp20I	TGGCCA	1 cut(s)	1328
MspA1I	CMGCKG	1 cut(s)	2191
MspCI	CTTAAG	2 cut(s)	1526, 1976
MspI	CCGG	2 cut(s)	594, 1445
MspR9I	CCNGG	5 cut(s)	585, 595, 764, 944, 1445
MssI	GTTTAAAC	1 cut(s)	97
MunI	CAATTG	1 cut(s)	501
MvaI	CCWGG	3 cut(s)	585, 764, 944
MwoI	GCNNNNNNNGC	5 cut(s)	26, 1267, 1405, 1414, 1423
NciI	CCSGG	2 cut(s)	595, 1445
NcoI	CCATGG	1 cut(s)	2386
NdeI	CATATG	1 cut(s)	1478
NlaIII	CATG	9 cut(s)	428, 629, 1268, 1277, 1403, 1591, 1852, 2218, 2390
NlaIV	GGNNCC	6 cut(s)	592, 793, 1443, 1583, 2319, 2384
NmuCI	GTSAC	3 cut(s)	121, 574, 847
NsbI	TGCGCA	1 cut(s)	2345
NsiI	ATGCAT	1 cut(s)	1593
NspI	RCATGY	1 cut(s)	1591
NspV	TTCGAA	1 cut(s)	680
PagI	TCATGA	1 cut(s)	625
PaqCI	CACCTGC	1 cut(s)	1723
PciSI	GCTCTTC	1 cut(s)	105
PfeI	GAWTC	3 cut(s)	337, 1224, 1615
PflMI	CCANNNNNTGG	1 cut(s)	872
PfoI	TCCNGGA	3 cut(s)	583, 593, 762
PkrI	GCNGC	5 cut(s)	19, 423, 705, 720, 1398
PleI	GAGTC	5 cut(s)	776, 835, 913, 1775, 2099
PmeI	GTTTAAAC	1 cut(s)	97
PpsI	GAGTC	5 cut(s)	776, 835, 913, 1775, 2099
PpuMI	RGGWCCY	1 cut(s)	1441
PshAI	GACNNNNGTC	2 cut(s)	845, 2184
Psp124BI	GAGCTC	1 cut(s)	117
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	3 cut(s)	583, 762, 942
PspGI	CCWGG	3 cut(s)	583, 762, 942
PspN4I	GGNNCC	6 cut(s)	592, 793, 1443, 1583, 2319, 2384
PspPI	GGNCC	5 cut(s)	591, 610, 760, 1441, 1582
PspPPI	RGGWCCY	1 cut(s)	1441
PstI	CTGCAG	3 cut(s)	22, 720, 1720
PsuI	RGATCY	6 cut(s)	660, 857, 892, 1004, 1431, 2260
PvuII	CAGCTG	1 cut(s)	2191
RsaI	GTAC	4 cut(s)	435, 961, 995, 1982
RsaNI	GTAC	4 cut(s)	434, 960, 994, 1981
RseI	CAYNNNNRTG	6 cut(s)	189, 1022, 1247, 1278, 1576, 2351
SacI	GAGCTC	1 cut(s)	117
SapI	GCTCTTC	1 cut(s)	105
SatI	GCNGC	5 cut(s)	18, 422, 704, 719, 1397
Sau96I	GGNCC	5 cut(s)	591, 610, 760, 1441, 1582
ScaI	AGTACT	1 cut(s)	995
SchI	GAGTC	5 cut(s)	776, 835, 913, 1776, 2099
ScrFI	CCNGG	5 cut(s)	585, 595, 764, 944, 1445
SduI	GDGCHC	4 cut(s)	117, 402, 1242, 2228
SfaNI	GCATC	3 cut(s)	739, 1435, 1600
SfcI	CTRYAG	7 cut(s)	18, 393, 474, 716, 1375, 1716, 1933
SfuI	TTCGAA	1 cut(s)	680
SinI	GGWCC	4 cut(s)	591, 760, 1441, 1582
SmiMI	CAYNNNNRTG	6 cut(s)	189, 1022, 1247, 1278, 1576, 2351
SmlI	CTYRAG	6 cut(s)	275, 926, 1178, 1526, 1976, 2264
SmoI	CTYRAG	6 cut(s)	275, 926, 1178, 1526, 1976, 2264
SsiI	CCGC	2 cut(s)	347, 1132
SspMI	CTAG	4 cut(s)	38, 468, 845, 1872
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	5 cut(s)	583, 593, 762, 942, 1443
StyI	CCWWGG	2 cut(s)	1671, 2386
TaaI	ACNGT	8 cut(s)	676, 756, 998, 1024, 1379, 1503, 2076, 2223
TaiI	ACGT	2 cut(s)	128, 2380
TaqI	TCGA	5 cut(s)	108, 556, 680, 1929, 2139
TaqII	GACCGA	1 cut(s)	562
TatI	WGTACW	1 cut(s)	993
TfiI	GAWTC	3 cut(s)	337, 1224, 1615
TscAI	CASTG	5 cut(s)	150, 583, 759, 1384, 2228
TseFI	GTSAC	3 cut(s)	121, 574, 847
TseI	GCWGC	5 cut(s)	17, 421, 703, 718, 1396
Tsp45I	GTSAC	3 cut(s)	121, 574, 847
TspDTI	ATGAA	9 cut(s)	72, 207, 551, 984, 1180, 1194, 1290, 1837, 2310
TspGWI	ACGGA	2 cut(s)	1233, 1424
TspRI	CASTG	5 cut(s)	150, 583, 759, 1384, 2228
Van91I	CCANNNNNTGG	1 cut(s)	872
Vha464I	CTTAAG	2 cut(s)	1526, 1976
VneI	GTGCAC	1 cut(s)	2224
VpaK11BI	GGWCC	4 cut(s)	591, 760, 1441, 1582
XapI	RAATTY	4 cut(s)	268, 931, 1621, 2366
XceI	RCATGY	1 cut(s)	1591
XspI	CTAG	4 cut(s)	38, 468, 845, 1872
ZrmI	AGTACT	1 cut(s)	995
Zsp2I	ATGCAT	1 cut(s)	1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.