Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010075

Physical Location & Seq

Genomic Coordinates Reverse (-)

51607670 .. 51617463

Gene Structure 9794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0368900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGCCGTTCTCCAGCTCCGGTGGTTCGTCATCATATAAGAATTTCAGACAAATAACGCGCGACCGATTACTGCATGAGATGCTTGGGTCTTGCAAAAGGGGGGACTCAACGCAATGGAAGGTACTTATCATGGATGAACTTACTACTACGATAATGTCTTACACTTGCACAGTCAGTGATACTACAGAAGAGGGTGTTTCATTGCTTGAACGCATAGAAAAGAAAAGGCAGCCAATGCCCCACATGGACGCAATATACTTTATCCGGCCTTCCAAAAAGAATGTTAACTTGTTCTTGTCAGACATGTCTGGAAGAGCATCATTATACAGGAAGGCATTTATTTTCTTCAGTTCACCTATTTCTAAAGATTTGGTTGGTCTCATCAAGGAGGATGGAAGTGTATTAAGTCGCATATCTGCATTAAGTGAGATGAATTTGGAGTATTTTGCTATAGACAGCCAGGGTTTTGTTACCAACAATGAGAGGGCTTTAGAGCAGCTTTATGGGGACAAGGAGGATTCATGCAAAGGTATAGTGTGTTTGAATGAGATAGCTGCACGTATTGCCACAGTCTTTGCTTCTTTAAAGGAATTTCCTATTGTGCGCTACCGAGCTGCTAAGTTGCTTGATGCCACCACGATTACCACTTTTCCTGATTTAATTCCTACAAAGCTTGCTGCTGGGATCTGGGATTGTCTCATAAAATATAAAAATACAATTCCAAATTTCCCTGTGACAGAATCATGCGAGTTGCTTATCCTTGACAGATCTGTGGATCAGATTGCACCGGTCATACATGAATGGACATATGATGCCATGTGTCATGACTTGTTAAATATGGAAGGAAATAGATATCTGCTTGAGGTTCCAAGCAAAACTGGTGGTCTGGCTGACAAGAAAGATGTTCTTCTAGAGGAGCATGATCCTGTCTGGCTTGAGTTTCGCCATGAACACATAGCAGAGGTTAGTGAACGGTTGAATGAGAAACTTACCAATTTTCTTTCAAATAATAAGGCAGCACAATTGCAGAATTCAAGTGATTGGGGATCTCATGAACGATCTACAAGGGAACTCAAGAAGATAACTCAGGCATTACCACAGTATGGCAAACAAAAGGACAGGCTTTCCCTTCATTCAGAGATTGCAAAGAAAATCCACTCAATTAGCAGGGAGCTTGGGCTTCGAGAGCTTGCGCAGCTGGAGCAAGCTCTTGTTTTTGGATATGCGGGAATGAAAGATGTGATCAAATTTCTGAGGACAAAAGATGATACAACTGGCGAAAATAAGTTACGTTTGTTGATGATTCTTGCTGCCATTTATCCTGAGAAATTTGAGGGTGAGGAGGGTCAAGAGAATTTGATGAAGTTGGCAAAATTATCACCATGTGATATGGCTGCTGTGAATAATATCAAACTGATTGGGGGATCATCAGAGAACAGAAACAGCTCATCAGGAATTTTTTTTCGGAACTTTAATCTTACTAAGAAGACTTGTGCGTCTAGGAAAGAACGTCCAAGTGAAGAAAAATGGCAGTTTTCAAGCTTTTATCCCATTATAGAGGAACTAATAGAAAAGCTTAGCAAAGGTGAACTGTCCAAGGAAGACTATCCATGCCTAAATGACCCAACCCCAACTTTACATCAATCCCCCCAGGCTCATTCAATAAGATCAAGACGGACACCGACATGGGCCCAGCGTGGGATTTCTGGAGATGGGATTTCAAGGCATGCATCCAATGATTTCAAAAAGATGGGCAAACGCATATTTGTAGTTATAGTAGGCGGAGCTACTAGATCAGAGCTTAGAGTTTGCCATAAGCTCACAGCGAAGCTGAAAAGGGAAGTTGTTCTAGGCTCCACATCTCTTGATGATCCTGCAACTTTTATTACGAAAGTAAAGATGATCACAGTAGACGATCAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005640 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0007049 GO:0007275 GO:0008150 GO:0009791 GO:0009987 GO:0012505 GO:0016020 GO:0016363 GO:0019867 GO:0022622 GO:0031090 GO:0031965 GO:0031967 GO:0031968 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0034399 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0070013 GO:0071944 GO:0090696 GO:0098588 GO:0098805 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WPP

Protein Analysis

641

Amino Acids

72.49

Weight (kDa)

8.43

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	40 - 630	1.7e-120	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47200 AT5G27940 AT5G43070
fragaria_vesca	FvH4_2g33670 FvH4_2g33670
malus_domestica	MD08G1091600.v1.1 MD15G1075600.v1.1
prunus_persica	Prupe.1G429000_v2.0.a1
pyrus_communis	pycom08g07390 pycom15g07080
rosa_chinensis	RchiOBHm_Chr6g0308881
rosa_laevigata	RLG00000010608
rosa_multiflora	Rmu_sc0004046.1_g000014
rosa_roxburghii	Rroxscaffold_7G00159820
rosa_rugosa	Rorug06G0368900 Rorug06G0369000
rosa_samantha	Rh6AG480500 Rh6BG490000 Rh6CG495400 Rh6DG480800
rosa_wichuraiana	Rw6G041880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1495
Acc16I	TGCGCA	1 cut(s)	1194
AccB7I	CCANNNNNTGG	1 cut(s)	1103
AccI	GTMKAC	1 cut(s)	1911
AccII	CGCG	2 cut(s)	58, 60
AciI	CCGC	2 cut(s)	1226, 1782
AclWI	GGATC	6 cut(s)	692, 783, 917, 1054, 1432, 1865
AcsI	RAATTY	9 cut(s)	40, 433, 590, 724, 1030, 1247, 1328, 1354, 1455
AcuI	CTGAAG	1 cut(s)	331
AdeI	CACNNNGTG	1 cut(s)	1385
AfaI	GTAC	1 cut(s)	123
AfiI	CCNNNNNNNGG	2 cut(s)	1103, 1698
AflIII	ACRYGT	1 cut(s)	303
AgeI	ACCGGT	1 cut(s)	787
AgsI	TTSAA	9 cut(s)	209, 544, 979, 1005, 1035, 1539, 1662, 1722, 1744
AjnI	CCWGG	2 cut(s)	459, 1650
Alw26I	GTCTC	2 cut(s)	383, 701
AlwI	GGATC	6 cut(s)	692, 783, 917, 1054, 1432, 1865
AoxI	GGCC	2 cut(s)	266, 1689
ApaI	GGGCCC	1 cut(s)	1693
ApeKI	GCWGC	9 cut(s)	229, 496, 554, 614, 677, 1016, 1195, 1310, 1394
ApoI	RAATTY	9 cut(s)	40, 433, 590, 724, 1030, 1247, 1328, 1354, 1455
AsiGI	ACCGGT	1 cut(s)	787
Asp700I	GAANNNNTTC	1 cut(s)	1845
AspLEI	GCGC	3 cut(s)	60, 606, 1195
AspS9I	GGNCC	2 cut(s)	1689, 1690
AsuHPI	GGTGA	4 cut(s)	345, 1349, 1371, 1598
BaeGI	GKGCMC	1 cut(s)	1693
BanII	GRGCYC	1 cut(s)	1693
BbsI	GAAGAC	2 cut(s)	1493, 1608
BbvI	GCAGC	9 cut(s)	241, 508, 541, 601, 664, 1028, 1207, 1297, 1381
BccI	CCATC	3 cut(s)	386, 1706, 1744
BciT130I	CCWGG	2 cut(s)	461, 1652
BclI	TGATCA	2 cut(s)	1242, 1902
BcoDI	GTCTC	2 cut(s)	383, 701
BfaI	CTAG	4 cut(s)	911, 1500, 1791, 1850
BfmI	CTRYAG	2 cut(s)	183, 450
BglII	AGATCT	1 cut(s)	767
BisI	GCNGC	9 cut(s)	230, 497, 555, 615, 678, 1017, 1196, 1311, 1395
BlpI	GCTNAGC	1 cut(s)	1577
BlsI	GCNGC	9 cut(s)	231, 498, 556, 616, 679, 1018, 1197, 1312, 1396
Bme1390I	CCNGG	2 cut(s)	461, 1652
BmgT120I	GGNCC	2 cut(s)	1689, 1690
BmiI	GGNNCC	3 cut(s)	867, 1691, 1855
BmrFI	CCNGG	2 cut(s)	461, 1652
BmsI	GCATC	5 cut(s)	69, 326, 619, 802, 1739
BpiI	GAAGAC	2 cut(s)	1493, 1608
BpmI	CTGGAG	2 cut(s)	1220, 1728
Bpu1102I	GCTNAGC	1 cut(s)	1577
BpuEI	CTTGAG	3 cut(s)	881, 956, 1058
BsaAI	YACGTR	1 cut(s)	560
BsaI	GGTCTC	1 cut(s)	383
BsaJI	CCNNGG	3 cut(s)	460, 1596, 1650
BsaWI	WCCGGW	2 cut(s)	17, 787
Bsc4I	CCNNNNNNNGG	2 cut(s)	1103, 1698
Bse118I	RCCGGY	1 cut(s)	787
Bse1I	ACTGG	2 cut(s)	883, 1279
Bse3DI	GCAATG	2 cut(s)	119, 200
BseBI	CCWGG	2 cut(s)	461, 1652
BseDI	CCNNGG	3 cut(s)	460, 1596, 1650
BseGI	GGATG	3 cut(s)	139, 397, 1730
BseLI	CCNNNNNNNGG	2 cut(s)	1103, 1698
BseMI	GCAATG	2 cut(s)	119, 200
BseMII	CTCAG	3 cut(s)	1100, 1244, 1314
BseNI	ACTGG	2 cut(s)	883, 1279
BseRI	GAGGAG	2 cut(s)	929, 1355
BseSI	GKGCMC	1 cut(s)	1693
BseXI	GCAGC	9 cut(s)	241, 508, 541, 601, 664, 1028, 1207, 1297, 1381
BseYI	CCCAGC	2 cut(s)	680, 1692
BsgI	GTGCAG	1 cut(s)	540
Bsh1236I	CGCG	2 cut(s)	58, 60
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	2 cut(s)	268, 1691
BshTI	ACCGGT	1 cut(s)	787
BsiEI	CGRYCG	1 cut(s)	64
BsiSI	CCGG	3 cut(s)	18, 265, 788
BslFI	GGGAC	2 cut(s)	116, 521
BslI	CCNNNNNNNGG	2 cut(s)	1103, 1698
BsmAI	GTCTC	2 cut(s)	383, 701
BsmFI	GGGAC	2 cut(s)	116, 521
BsnI	GGCC	2 cut(s)	268, 1691
Bso31I	GGTCTC	1 cut(s)	383
Bsp120I	GGGCCC	1 cut(s)	1689
Bsp1286I	GDGCHC	1 cut(s)	1693
Bsp1720I	GCTNAGC	1 cut(s)	1577
BspACI	CCGC	2 cut(s)	1226, 1782
BspANI	GGCC	2 cut(s)	268, 1691
BspCNI	CTCAG	3 cut(s)	1099, 1245, 1315
BspFNI	CGCG	2 cut(s)	58, 60
BspHI	TCATGA	2 cut(s)	823, 1051
BspLI	GGNNCC	3 cut(s)	867, 1691, 1855
BspPI	GGATC	6 cut(s)	692, 783, 917, 1054, 1432, 1865
BspQI	GCTCTTC	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	383
BsrDI	GCAATG	2 cut(s)	119, 200
BsrFI	RCCGGY	1 cut(s)	787
BsrI	ACTGG	2 cut(s)	883, 1279
BssAI	RCCGGY	1 cut(s)	787
BssECI	CCNNGG	3 cut(s)	460, 1596, 1650
BssT1I	CCWWGG	1 cut(s)	1596
Bst2UI	CCWGG	2 cut(s)	461, 1652
Bst4CI	ACNGT	6 cut(s)	172, 571, 975, 1101, 1593, 1909
Bst6I	CTCTTC	2 cut(s)	183, 307
BstAPI	GCANNNNNTGC	3 cut(s)	79, 235, 563
BstBAI	YACGTR	1 cut(s)	560
BstC8I	GCNNGC	4 cut(s)	675, 1191, 1206, 1728
BstDEI	CTNAG	7 cut(s)	618, 1086, 1253, 1323, 1482, 1577, 1802
BstF5I	GGATG	3 cut(s)	139, 397, 1730
BstFNI	CGCG	2 cut(s)	58, 60
BstHHI	GCGC	3 cut(s)	60, 606, 1195
BstMAI	GTCTC	2 cut(s)	383, 701
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	6 cut(s)	79, 235, 563, 1186, 1195, 1201
BstNI	CCWGG	2 cut(s)	461, 1652
BstNSI	RCATGY	2 cut(s)	307, 1730
BstSCI	CCNGG	2 cut(s)	459, 1650
BstSFI	CTRYAG	2 cut(s)	183, 450
BstSLI	GKGCMC	1 cut(s)	1693
BstUI	CGCG	2 cut(s)	58, 60
BstV1I	GCAGC	9 cut(s)	241, 508, 541, 601, 664, 1028, 1207, 1297, 1381
BstV2I	GAAGAC	2 cut(s)	1493, 1608
BstX2I	RGATCY	3 cut(s)	684, 767, 1046
BstYI	RGATCY	3 cut(s)	684, 767, 1046
BsuRI	GGCC	2 cut(s)	268, 1691
BtsCI	GGATG	3 cut(s)	139, 397, 1730
BtsIMutI	CAGTG	1 cut(s)	181
Cac8I	GCNNGC	4 cut(s)	675, 1191, 1206, 1728
CciI	TCATGA	2 cut(s)	823, 1051
CfoI	GCGC	3 cut(s)	60, 606, 1195
Cfr10I	RCCGGY	1 cut(s)	787
Cfr13I	GGNCC	2 cut(s)	1689, 1690
CseI	GACGC	2 cut(s)	257, 1485
Csp6I	GTAC	1 cut(s)	122
CspAI	ACCGGT	1 cut(s)	787
CspCI	CAANNNNNGTGG	6 cut(s)	556, 591, 862, 897, 1846, 1881
CviQI	GTAC	1 cut(s)	122
DdeI	CTNAG	7 cut(s)	618, 1086, 1253, 1323, 1482, 1577, 1802
DraI	TTTAAA	1 cut(s)	585
DraIII	CACNNNGTG	1 cut(s)	1385
DrdI	GACNNNNNNGTC	1 cut(s)	1495
DseDI	GACNNNNNNGTC	1 cut(s)	1495
Eam1104I	CTCTTC	2 cut(s)	183, 307
EarI	CTCTTC	2 cut(s)	183, 307
EciI	GGCGGA	1 cut(s)	1797
Eco130I	CCWWGG	1 cut(s)	1596
Eco24I	GRGCYC	1 cut(s)	1693
Eco31I	GGTCTC	1 cut(s)	383
Eco32I	GATATC	1 cut(s)	854
Eco57I	CTGAAG	1 cut(s)	331
EcoRI	GAATTC	1 cut(s)	1030
EcoRII	CCWGG	2 cut(s)	459, 1650
EcoRV	GATATC	1 cut(s)	854
EcoT14I	CCWWGG	1 cut(s)	1596
EcoT22I	ATGCAT	1 cut(s)	1732
EcoT38I	GRGCYC	1 cut(s)	1693
ErhI	CCWWGG	1 cut(s)	1596
FalI	AAGNNNNNCTT	2 cut(s)	891, 923
FaqI	GGGAC	2 cut(s)	116, 521
FauI	CCCGC	1 cut(s)	1219
FauNDI	CATATG	1 cut(s)	808
FbaI	TGATCA	2 cut(s)	1242, 1902
FblI	GTMKAC	1 cut(s)	1911
Fnu4HI	GCNGC	9 cut(s)	230, 497, 555, 615, 678, 1017, 1196, 1311, 1395
FokI	GGATG	3 cut(s)	146, 404, 1717
FriOI	GRGCYC	1 cut(s)	1693
Fsp4HI	GCNGC	9 cut(s)	230, 497, 555, 615, 678, 1017, 1196, 1311, 1395
FspBI	CTAG	4 cut(s)	911, 1500, 1791, 1850
FspI	TGCGCA	1 cut(s)	1194
GlaI	GCGC	3 cut(s)	59, 605, 1194
GluI	GCNGC	9 cut(s)	230, 497, 555, 615, 678, 1017, 1196, 1311, 1395
GsaI	CCCAGC	2 cut(s)	684, 1696
GsuI	CTGGAG	2 cut(s)	1220, 1728
HaeIII	GGCC	2 cut(s)	268, 1691
HapII	CCGG	3 cut(s)	18, 265, 788
HgaI	GACGC	2 cut(s)	257, 1485
HhaI	GCGC	3 cut(s)	60, 606, 1195
Hin6I	GCGC	3 cut(s)	58, 604, 1193
HinP1I	GCGC	3 cut(s)	58, 604, 1193
HincII	GTYRAC	1 cut(s)	286
HindII	GTYRAC	1 cut(s)	286
HindIII	AAGCTT	3 cut(s)	671, 1540, 1574
HinfI	GANTC	4 cut(s)	104, 518, 740, 1303
HpaI	GTTAAC	1 cut(s)	286
HpaII	CCGG	3 cut(s)	18, 265, 788
HphI	GGTGA	4 cut(s)	345, 1349, 1371, 1598
Hpy166II	GTNNAC	5 cut(s)	286, 353, 971, 1589, 1912
Hpy188I	TCNGA	8 cut(s)	47, 301, 780, 1138, 1254, 1432, 1467, 1798
Hpy8I	GTNNAC	5 cut(s)	286, 353, 971, 1589, 1912
HpyAV	CCTTC	5 cut(s)	112, 279, 325, 836, 1139
HpyCH4III	ACNGT	6 cut(s)	172, 571, 975, 1101, 1593, 1909
HpyCH4IV	ACGT	3 cut(s)	559, 1291, 1510
HpyF10VI	GCNNNNNNNGC	6 cut(s)	79, 235, 563, 1186, 1195, 1201
HpyF3I	CTNAG	7 cut(s)	618, 1086, 1253, 1323, 1482, 1577, 1802
HpySE526I	ACGT	3 cut(s)	559, 1291, 1510
HspAI	GCGC	3 cut(s)	58, 604, 1193
Ksp22I	TGATCA	2 cut(s)	1242, 1902
KspAI	GTTAAC	1 cut(s)	286
LguI	GCTCTTC	1 cut(s)	307
LmnI	GCTCC	6 cut(s)	20, 916, 1171, 1201, 1784, 1859
Lsp1109I	GCAGC	9 cut(s)	241, 508, 541, 601, 664, 1028, 1207, 1297, 1381
LweI	GCATC	5 cut(s)	69, 326, 619, 802, 1739
MaeI	CTAG	4 cut(s)	911, 1500, 1791, 1850
MaeII	ACGT	3 cut(s)	559, 1291, 1510
MaeIII	GTNAC	3 cut(s)	469, 733, 1287
MboII	GAAGA	8 cut(s)	200, 324, 337, 899, 1090, 1498, 1532, 1613
MfeI	CAATTG	1 cut(s)	1022
MflI	RGATCY	3 cut(s)	684, 767, 1046
MhlI	GDGCHC	1 cut(s)	1693
MlyI	GAGTC	1 cut(s)	98
Mph1103I	ATGCAT	1 cut(s)	1732
MroXI	GAANNNNTTC	1 cut(s)	1845
MseI	TTAA	7 cut(s)	285, 404, 422, 584, 659, 833, 1473
MslI	CAYNNNNRTG	1 cut(s)	1684
MspA1I	CMGCKG	1 cut(s)	1198
MspI	CCGG	3 cut(s)	18, 265, 788
MspR9I	CCNGG	2 cut(s)	461, 1652
MunI	CAATTG	1 cut(s)	1022
MvaI	CCWGG	2 cut(s)	461, 1652
MvnI	CGCG	2 cut(s)	58, 60
MwoI	GCNNNNNNNGC	6 cut(s)	79, 235, 563, 1186, 1195, 1201
NdeI	CATATG	1 cut(s)	808
NlaIV	GGNNCC	3 cut(s)	867, 1691, 1855
NmuCI	GTSAC	1 cut(s)	733
NsbI	TGCGCA	1 cut(s)	1194
NsiI	ATGCAT	1 cut(s)	1732
NspI	RCATGY	2 cut(s)	307, 1730
PaeI	GCATGC	1 cut(s)	1730
PagI	TCATGA	2 cut(s)	823, 1051
PciI	ACATGT	1 cut(s)	303
PciSI	GCTCTTC	1 cut(s)	307
PdmI	GAANNNNTTC	1 cut(s)	1845
PfeI	GAWTC	3 cut(s)	518, 740, 1303
PflMI	CCANNNNNTGG	1 cut(s)	1103
PinAI	ACCGGT	1 cut(s)	787
PkrI	GCNGC	9 cut(s)	231, 498, 556, 616, 679, 1018, 1197, 1312, 1396
PleI	GAGTC	1 cut(s)	98
PpsI	GAGTC	1 cut(s)	98
Ppu21I	YACGTR	1 cut(s)	560
PscI	ACATGT	1 cut(s)	303
Psp6I	CCWGG	2 cut(s)	459, 1650
PspFI	CCCAGC	2 cut(s)	680, 1692
PspGI	CCWGG	2 cut(s)	459, 1650
PspN4I	GGNNCC	3 cut(s)	867, 1691, 1855
PspOMI	GGGCCC	1 cut(s)	1689
PspPI	GGNCC	2 cut(s)	1689, 1690
PsuI	RGATCY	3 cut(s)	684, 767, 1046
PvuII	CAGCTG	1 cut(s)	1198
RsaI	GTAC	1 cut(s)	123
RsaNI	GTAC	1 cut(s)	122
RseI	CAYNNNNRTG	1 cut(s)	1684
SapI	GCTCTTC	1 cut(s)	307
SaqAI	TTAA	7 cut(s)	285, 404, 422, 584, 659, 833, 1473
SatI	GCNGC	9 cut(s)	230, 497, 555, 615, 678, 1017, 1196, 1311, 1395
Sau96I	GGNCC	2 cut(s)	1689, 1690
SchI	GAGTC	1 cut(s)	98
ScrFI	CCNGG	2 cut(s)	461, 1652
SduI	GDGCHC	1 cut(s)	1693
SfaNI	GCATC	5 cut(s)	69, 326, 619, 802, 1739
SfcI	CTRYAG	2 cut(s)	183, 450
SmiMI	CAYNNNNRTG	1 cut(s)	1684
SmlI	CTYRAG	3 cut(s)	860, 935, 1073
SmoI	CTYRAG	3 cut(s)	860, 935, 1073
SphI	GCATGC	1 cut(s)	1730
SsiI	CCGC	2 cut(s)	1226, 1782
SspMI	CTAG	4 cut(s)	911, 1500, 1791, 1850
StyD4I	CCNGG	2 cut(s)	459, 1650
StyI	CCWWGG	1 cut(s)	1596
TaaI	ACNGT	6 cut(s)	172, 571, 975, 1101, 1593, 1909
TaiI	ACGT	3 cut(s)	562, 1294, 1513
TaqI	TCGA	1 cut(s)	1183
TaqII	GACCGA	1 cut(s)	78
TfiI	GAWTC	3 cut(s)	518, 740, 1303
Tru1I	TTAA	7 cut(s)	285, 404, 422, 584, 659, 833, 1473
Tru9I	TTAA	7 cut(s)	285, 404, 422, 584, 659, 833, 1473
TscAI	CASTG	1 cut(s)	181
TseFI	GTSAC	1 cut(s)	733
TseI	GCWGC	9 cut(s)	229, 496, 554, 614, 677, 1016, 1195, 1310, 1394
Tsp45I	GTSAC	1 cut(s)	733
TspGWI	ACGGA	1 cut(s)	1690
TspRI	CASTG	1 cut(s)	181
Van91I	CCANNNNNTGG	1 cut(s)	1103
XapI	RAATTY	9 cut(s)	40, 433, 590, 724, 1030, 1247, 1328, 1354, 1455
XbaI	TCTAGA	1 cut(s)	910
XceI	RCATGY	2 cut(s)	307, 1730
XmiI	GTMKAC	1 cut(s)	1911
XmnI	GAANNNNTTC	1 cut(s)	1845
XspI	CTAG	4 cut(s)	911, 1500, 1791, 1850
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.