UPF0160 protein-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49320 AT3G49320 AT5G41970 |
| fragaria_vesca | FvH4_5g11020 |
| malus_domestica | MD06G1117500.v1.1 MD14G1124700.v1.1 |
| prunus_persica | Prupe.5G128600_v2.0.a1 |
| pyrus_communis | pycom07g04680 pycom14g11040 |
| rosa_chinensis | RchiOBHm_Chr7g0186791 |
| rosa_laevigata | RLG00000004815 |
| rosa_multiflora | Rmu_ssc0000024.1_g000044 |
| rosa_roxburghii | Rroxscaffold_3G00267820 |
| rosa_rugosa | Rorug06G0476700 |
| rosa_samantha | Rh7AG063800 Rh7BG080300 Rh7CG083700 Rh7DG084600 |
| rosa_wichuraiana | Rw7G007260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 47, 60 |
| AcsI | RAATTY | 1 cut(s) | 100 |
| AgsI | TTSAA | 1 cut(s) | 98 |
| AluBI | AGCT | 3 cut(s) | 45, 140, 173 |
| AluI | AGCT | 3 cut(s) | 45, 140, 173 |
| Alw26I | GTCTC | 1 cut(s) | 171 |
| AlwI | GGATC | 2 cut(s) | 47, 60 |
| ApeKI | GCWGC | 1 cut(s) | 151 |
| ApoI | RAATTY | 1 cut(s) | 100 |
| BamHI | GGATCC | 1 cut(s) | 52 |
| BbvI | GCAGC | 1 cut(s) | 138 |
| BcoDI | GTCTC | 1 cut(s) | 171 |
| BfaI | CTAG | 1 cut(s) | 174 |
| BisI | GCNGC | 1 cut(s) | 152 |
| BlsI | GCNGC | 1 cut(s) | 153 |
| BmiI | GGNNCC | 1 cut(s) | 54 |
| BmsI | GCATC | 3 cut(s) | 69, 137, 138 |
| BsaI | GGTCTC | 1 cut(s) | 171 |
| Bse1I | ACTGG | 1 cut(s) | 227 |
| Bse3DI | GCAATG | 1 cut(s) | 114 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseMI | GCAATG | 1 cut(s) | 114 |
| BseNI | ACTGG | 1 cut(s) | 227 |
| BseXI | GCAGC | 1 cut(s) | 138 |
| BseYI | CCCAGC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 1 cut(s) | 171 |
| Bso31I | GGTCTC | 1 cut(s) | 171 |
| Bsp143I | GATC | 1 cut(s) | 52 |
| BspLI | GGNNCC | 1 cut(s) | 54 |
| BspPI | GGATC | 2 cut(s) | 47, 60 |
| BspTNI | GGTCTC | 1 cut(s) | 171 |
| BsrDI | GCAATG | 1 cut(s) | 114 |
| BsrI | ACTGG | 1 cut(s) | 227 |
| BssMI | GATC | 1 cut(s) | 52 |
| Bst4CI | ACNGT | 1 cut(s) | 64 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 55 |
| BstMAI | GTCTC | 1 cut(s) | 171 |
| BstMBI | GATC | 1 cut(s) | 52 |
| BstV1I | GCAGC | 1 cut(s) | 138 |
| BstX2I | RGATCY | 1 cut(s) | 52 |
| BstYI | RGATCY | 1 cut(s) | 52 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| BtsI | GCAGTG | 2 cut(s) | 35, 199 |
| BtsIMutI | CAGTG | 2 cut(s) | 35, 199 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 175, 210 |
| CviJI | RGCY | 4 cut(s) | 5, 45, 140, 173 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 45, 140, 173 |
| DpnI | GATC | 1 cut(s) | 54 |
| DpnII | GATC | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 171 |
| FaiI | YATR | 2 cut(s) | 38, 220 |
| Fnu4HI | GCNGC | 1 cut(s) | 152 |
| FokI | GGATG | 1 cut(s) | 91 |
| Fsp4HI | GCNGC | 1 cut(s) | 152 |
| FspBI | CTAG | 1 cut(s) | 174 |
| GluI | GCNGC | 1 cut(s) | 152 |
| GsaI | CCCAGC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 2 cut(s) | 52, 125 |
| Hpy188III | TCNNGA | 1 cut(s) | 71 |
| HpyCH4III | ACNGT | 1 cut(s) | 64 |
| HpyCH4V | TGCA | 5 cut(s) | 28, 82, 107, 200, 208 |
| Kzo9I | GATC | 1 cut(s) | 52 |
| LmnI | GCTCC | 1 cut(s) | 125 |
| LpnPI | CCDG | 3 cut(s) | 56, 69, 208 |
| Lsp1109I | GCAGC | 1 cut(s) | 138 |
| LweI | GCATC | 3 cut(s) | 69, 137, 138 |
| MaeI | CTAG | 1 cut(s) | 174 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MalI | GATC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 52 |
| MflI | RGATCY | 1 cut(s) | 52 |
| MluCI | AATT | 2 cut(s) | 23, 100 |
| MnlI | CCTC | 1 cut(s) | 78 |
| NdeII | GATC | 1 cut(s) | 52 |
| NlaIV | GGNNCC | 1 cut(s) | 54 |
| PkrI | GCNGC | 1 cut(s) | 153 |
| PspFI | CCCAGC | 1 cut(s) | 5 |
| PspN4I | GGNNCC | 1 cut(s) | 54 |
| PsuI | RGATCY | 1 cut(s) | 52 |
| SatI | GCNGC | 1 cut(s) | 152 |
| Sau3AI | GATC | 1 cut(s) | 52 |
| SetI | ASST | 4 cut(s) | 47, 89, 142, 175 |
| SfaNI | GCATC | 3 cut(s) | 69, 137, 138 |
| SgeI | CNNG | 8 cut(s) | 18, 68, 83, 134, 144, 186, 213, 221 |
| Sse9I | AATT | 2 cut(s) | 23, 100 |
| SspMI | CTAG | 1 cut(s) | 174 |
| TaaI | ACNGT | 1 cut(s) | 64 |
| TasI | AATT | 2 cut(s) | 23, 100 |
| TscAI | CASTG | 2 cut(s) | 35, 199 |
| TseI | GCWGC | 1 cut(s) | 151 |
| TspDTI | ATGAA | 1 cut(s) | 36 |
| TspRI | CASTG | 2 cut(s) | 35, 199 |
| XapI | RAATTY | 1 cut(s) | 100 |
| XspI | CTAG | 1 cut(s) | 174 |