Rorug06G0500800

Protein of unknown function (DUF3339)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0016502
Physical Location & Seq
Forward (+)
61611499 .. 61615385
3887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0500800.1

Sequence Viewer

Length: 2520 bp
ATGCTTCGAAGAGTTGGTAGCGTGCCAAGTAATGTAACCTCCAGGCCTGCCTTTTCATCTCAGACTCTTGATTTGAAGGTTTCTCAGGAAGTTATGCTGACGGGAGGATTGGAGCTCTCCAAGTCCATTAATTTCTTATGTCAGAGACTTGATGAGGGGAAGTTGGGTAGAGTAATAGAGTCAGATTCTGAAGATGTGGTCCCACTCAAACCTCAGCCAGATTTGGACGGTTTATCTGCTAAGGGAATCGAAGAGTATGAGGATGATAATGATGTTGAATTTACCATTGTCGAAGTTGGGACAGAAATACCTGAGAAGGAAAAGTTGAACTCTGATCGAGTTTCTGGTGATGCTAGTGACGTGTCCGCAATTGAGAATATCTATGTGGATGATGTCATTGAGGATTATGACATAGACCTTGATGAGAAGACTATGATTGTTTCAAAGGATGTCTGTGGCAATTATGTGGATGACTTCATGGTGAATGAAACAAAACATGAAGAAGATAGCATATGCAGATCAAACATGAAAGAGGTGGAGTCAGCAGAGTTGAACCATCCATTTGCTTTAGAAGAGTGTCTTGAGGAGAGAGGCCACATGGAGCTTAAGTCGAGTTACATGGCTAGTAAAACAGGTAAAAAATCACTTAGCCTGGATGATGTTACCGAATCTGTATCAAATGAGTTCTTAAACATGCTGGGGATGGATGGTTGCTGGAGTTCTAATAGTGATCCAGAGTCTCCTAGAGAACTACTTTTAAGAGAGTTTGAAAAAGAGGCTCTGACTTCTGGAGATTTATTTTTCAATGTTGATTGGAATGAAGAGCAGCCCGAAATTGGATCCTCTCTTTCTCCGGTTTCTTACTATGAAGATTATTTTGAAAATTCTGATTTGTCTATGATTATTCAAGCTGCTGAAGAGGAAAGCAAGAGAGAAAGTGACTTATTAAAGAGAAGAAAAGCCACAATCCTGGAAGGCTTGGAGACTGAAGCTTTGATGCGAGAATGGGGATTAAATGAAACGGACTTTCAGAACTCTCCCCGTATCCTTTCTGGTGGATTTGGCAGTCCAATTGATCTACCCCTTGAAGAGCCACTGCTACCACCACTTGAAGTAGGCTTTGGTCCTTATGTTCGAATGAGGGGTGGAGGTTTTTTGCGGTCTATGAATCCTTCTCTTTTCAGAAATGCTAAAAATAGTGGGACTTTGGTCATTCAAGTTTCTAATCCAATTGTAATACCGGCAAAACTGGGTTATGATGTTGTGGAGATATTGCAGCAGTTGGCACTGGGTGGAATTGATAAGTTGCATATGCAGGTGAGCAAGCTAATGCCTTTGGAAAATATAACTGGCAAGACAATACATCAAGTAGCATGGGAGGCAGTACCAACCACAGTGGTCTCTGAGAGGTTTGAGCAGATTTTGTATGGTGAGAGCAAGGATGAAGGGTTTCCATCTAGTTGGAATTTTAATGACCTGAGATCAGAACTAGAAGGTGGTGAGATGGGATCAGACTATGTATCTCTAGAATGTCTTGTTCCATTGGCTATAAATAAGATTGAAGCCCTCTCACTGGAAGGGTTAAGAATACAGTCTCACATGTCAGATTCAGAGGCACTGTCAAGTATATATCCTCAGTCTGGTGGGAGGATTACATGCCCACATGCAAATTGTGGTGAAATTTTCAGGTCAGGAGTTGGCGGAGGGTTGCAAATGTCGGATTTTAGAGACTCTGATGATGATATTGATGAATTATTGGATCTGTCTTTATCATTGGAAGAGTGGTCGAGGCTAGATGCTAATATTAGTGGTGATGAAGATCAAAGCAGAGAGCAGTTTTTGAAAATCCTTGCTGCTCATGATGCCAAGTGCACAGATTTGGTTGATGAAATTTTGACAGAAGACAGGAGCTGCAGTGATTTATCTGGTAGGAATTGTGGAGTCTTGGGAAACAATCTCACAATTGCTCTCATGGTGCAGCTTAGAGATCCCTTTCGGAACTATGAGCCAGTTGGTGTGCCAATGCTTGCTCTAATCCAAGTGGAGAGAGGTATAACCCATTCAATTCAAAAAATTCCTAGCACGGTGTTGAATGATAGCAACAAAAAAGAACATGATGTGACCATCTTAGAGGATATTGATGGCAAGGAAACCGAGAGAAATGAAGGAGATGAAGAAGGCAATCCCCAGTTTAAAATTATCGATGTCCATCTTGCAGGAGTGGACACTGAGTCTGGCAACGAGCAGCTTTGGGGTACCACAACACAACTGCAATCCGGGTCCCGATGGTTGCTTGCTGCTGGTTTGGGTAAGGCCATTAGTTTTCCACTTTCGAACTCAAAAGCCATTGTGAGATCATCCCCATTGGCTTCAGCGAAGTGGCAGTATAGGGATAGTTTCTGGAGCATCTCCTCTACTTCTCATGTTCAGGATACGAGAGCTGCCTGGAAAGACTTGATTGCTCCACATATTCGAAACCCTAATGTCATATTTTTGAATGAAACCATCAAGCCACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3339

Protein Analysis

839

Amino Acids

93.2

Weight (kDa)

4.46

Isoelectric Point (pI)

52.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMI1_PMIR1-2_C PF21745 403 - 543 2.7e-40 PMI1/PMIR1-2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01950 AT5G14110
malus_domestica MD06G1140400.v1.1 MD09G1009400.v1.1 MD14G1155600.v1.1
prunus_persica Prupe.5G149600_v2.0.a1
pyrus_communis pycom111g00760
rosa_chinensis RchiOBHm_Chr2g0175811 RchiOBHm_Chr7g0189911
rosa_roxburghii Rroxscaffold_3G00265060
rosa_rugosa Rorug02G0587900 Rorug06G0500800
rosa_samantha Rh2CG641400
rosa_wichuraiana Rw7G009200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1306
Acc36I ACCTGC 1 cut(s) 1306
Acc65I GGTACC 1 cut(s) 2255
AccB1I GGYRCC 1 cut(s) 2255
AciI CCGC 3 cut(s) 366, 1159, 1701
AclWI GGATC 6 cut(s) 725, 834, 847, 1516, 1767, 1982
AcsI RAATTY 6 cut(s) 278, 883, 1465, 1680, 1890, 2073
AcuI CTGAAG 4 cut(s) 210, 936, 1008, 2355
AdeI CACNNNGTG 1 cut(s) 1292
AfaI GTAC 2 cut(s) 1386, 2257
AfiI CCNNNNNNNGG 3 cut(s) 836, 1573, 1640
AflII CTTAAG 1 cut(s) 605
AflIII ACRYGT 2 cut(s) 360, 1599
AhdI GACNNNNNGTC 1 cut(s) 2230
AjiI CACGTC 1 cut(s) 361
AjnI CCWGG 4 cut(s) 41, 651, 969, 2444
AjuI GAANNNNNNNTTGG 2 cut(s) 1104, 1136
AluBI AGCT 9 cut(s) 115, 604, 911, 992, 1327, 1911, 1981, 2248, 2441
AluI AGCT 9 cut(s) 115, 604, 911, 992, 1327, 1911, 1981, 2248, 2441
Alw21I GWGCWC 2 cut(s) 117, 1874
Alw26I GTCTC 6 cut(s) 139, 744, 977, 1405, 1599, 1722
Alw44I GTGCAC 1 cut(s) 1870
AlwI GGATC 6 cut(s) 725, 834, 847, 1516, 1767, 1982
AlwNI CAGNNNCTG 2 cut(s) 188, 1911
AoxI GGCC 3 cut(s) 44, 592, 2313
ApaLI GTGCAC 1 cut(s) 1870
ApeKI GCWGC 9 cut(s) 826, 911, 1276, 1853, 1911, 1978, 2245, 2297, 2441
ApoI RAATTY 6 cut(s) 278, 883, 1465, 1680, 1890, 2073
ArsI GACNNNNNNTTYG 4 cut(s) 55, 87, 976, 1008
AseI ATTAAT 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 1449
Asp718I GGTACC 1 cut(s) 2255
AspS9I GGNCC 3 cut(s) 199, 1124, 2280
AsuC2I CCSGG 1 cut(s) 2278
AsuHPI GGTGA 7 cut(s) 359, 493, 1330, 1442, 1511, 1688, 1823
AsuII TTCGAA 4 cut(s) 7, 1135, 2333, 2473
AvaII GGWCC 3 cut(s) 199, 1124, 2280
BaeGI GKGCMC 1 cut(s) 1874
BamHI GGATCC 1 cut(s) 839
BanI GGYRCC 1 cut(s) 2255
BanII GRGCYC 1 cut(s) 117
BbsI GAAGAC 2 cut(s) 434, 1908
Bbv12I GWGCWC 2 cut(s) 117, 1874
BbvCI CCTCAGC 1 cut(s) 213
BbvI GCAGC 9 cut(s) 838, 898, 1288, 1840, 1898, 1990, 2257, 2284, 2428
BciT130I CCWGG 4 cut(s) 43, 653, 971, 2446
BciVI GTATCC 2 cut(s) 1055, 2425
BcnI CCSGG 1 cut(s) 2278
BcoDI GTCTC 6 cut(s) 139, 744, 977, 1405, 1599, 1722
BfaI CTAG 8 cut(s) 354, 624, 744, 1458, 1490, 1526, 1793, 2079
BfmI CTRYAG 1 cut(s) 1912
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 1306
BfuI GTATCC 2 cut(s) 1055, 2425
BisI GCNGC 9 cut(s) 827, 912, 1277, 1854, 1912, 1979, 2246, 2298, 2442
BlsI GCNGC 9 cut(s) 828, 913, 1278, 1855, 1913, 1980, 2247, 2299, 2443
Bme1390I CCNGG 5 cut(s) 43, 653, 971, 2278, 2446
Bme18I GGWCC 3 cut(s) 199, 1124, 2280
BmeRI GACNNNNNGTC 1 cut(s) 2230
BmgBI CACGTC 1 cut(s) 361
BmgT120I GGNCC 3 cut(s) 199, 1124, 2280
BmiI GGNNCC 5 cut(s) 201, 841, 2257, 2281, 2282
BmrFI CCNGG 5 cut(s) 43, 653, 971, 2278, 2446
BmrI ACTGGG 3 cut(s) 1259, 1298, 2182
BmsI GCATC 5 cut(s) 340, 987, 1786, 1852, 2415
BmuI ACTGGG 3 cut(s) 1259, 1298, 2182
BoxI GACNNNNGTC 1 cut(s) 1208
BpiI GAAGAC 2 cut(s) 434, 1908
BpmI CTGGAG 4 cut(s) 25, 736, 810, 2422
Bpu10I CCTNAGC 2 cut(s) 213, 240
Bpu14I TTCGAA 4 cut(s) 7, 1135, 2333, 2473
BpuEI CTTGAG 1 cut(s) 602
BpuMI CCSGG 1 cut(s) 2278
Bsa29I ATCGAT 1 cut(s) 2202
BsaBI GATNNNNATC 2 cut(s) 1818, 2208
BsaI GGTCTC 1 cut(s) 1405
BsaWI WCCGGW 1 cut(s) 853
BsaXI ACNNNNNCTCC 4 cut(s) 593, 623, 1900, 1930
Bsc4I CCNNNNNNNGG 3 cut(s) 836, 1573, 1640
Bse118I RCCGGY 1 cut(s) 1240
Bse1I ACTGG 6 cut(s) 1254, 1293, 1354, 1578, 2009, 2188
Bse8I GATNNNNATC 2 cut(s) 1818, 2208
BseBI CCWGG 4 cut(s) 43, 653, 971, 2446
BseCI ATCGAT 1 cut(s) 2202
BseJI GATNNNNATC 2 cut(s) 1818, 2208
BseLI CCNNNNNNNGG 3 cut(s) 836, 1573, 1640
BseMII CTCAG 8 cut(s) 74, 98, 227, 303, 1395, 1469, 1649, 2220
BseNI ACTGG 6 cut(s) 1254, 1293, 1354, 1578, 2009, 2188
BseRI GAGGAG 2 cut(s) 599, 2401
BseSI GKGCMC 1 cut(s) 1874
BseXI GCAGC 9 cut(s) 838, 898, 1288, 1840, 1898, 1990, 2257, 2284, 2428
BseYI CCCAGC 1 cut(s) 697
BsgI GTGCAG 1 cut(s) 1997
BshFI GGCC 3 cut(s) 46, 594, 2315
BshNI GGYRCC 1 cut(s) 2255
BshVI ATCGAT 1 cut(s) 2202
BsiHKAI GWGCWC 2 cut(s) 117, 1874
BsiSI CCGG 3 cut(s) 854, 1241, 2277
BslFI GGGAC 4 cut(s) 185, 313, 1216, 2266
BslI CCNNNNNNNGG 3 cut(s) 836, 1573, 1640
BsmAI GTCTC 6 cut(s) 139, 744, 977, 1405, 1599, 1722
BsmFI GGGAC 4 cut(s) 185, 313, 1216, 2266
BsnI GGCC 3 cut(s) 46, 594, 2315
Bso31I GGTCTC 1 cut(s) 1405
Bsp119I TTCGAA 4 cut(s) 7, 1135, 2333, 2473
Bsp1286I GDGCHC 2 cut(s) 117, 1874
BspACI CCGC 3 cut(s) 366, 1159, 1701
BspANI GGCC 3 cut(s) 46, 594, 2315
BspCNI CTCAG 8 cut(s) 73, 97, 226, 304, 1396, 1470, 1648, 2221
BspDI ATCGAT 1 cut(s) 2202
BspHI TCATGA 1 cut(s) 1858
BspLI GGNNCC 5 cut(s) 201, 841, 2257, 2281, 2282
BspMAI CTGCAG 1 cut(s) 1916
BspMI ACCTGC 1 cut(s) 1306
BspPI GGATC 6 cut(s) 725, 834, 847, 1516, 1767, 1982
BspQI GCTCTTC 2 cut(s) 816, 1083
BspT104I TTCGAA 4 cut(s) 7, 1135, 2333, 2473
BspT107I GGYRCC 1 cut(s) 2255
BspTI CTTAAG 1 cut(s) 605
BspTNI GGTCTC 1 cut(s) 1405
BsrFI RCCGGY 1 cut(s) 1240
BsrI ACTGG 6 cut(s) 1254, 1293, 1354, 1578, 2009, 2188
BssAI RCCGGY 1 cut(s) 1240
Bst2UI CCWGG 4 cut(s) 43, 653, 971, 2446
Bst4CI ACNGT 5 cut(s) 230, 1396, 1593, 1620, 2086
Bst6I CTCTTC 7 cut(s) 4, 246, 567, 816, 912, 1083, 1773
BstAFI CTTAAG 1 cut(s) 605
BstBI TTCGAA 4 cut(s) 7, 1135, 2333, 2473
BstC8I GCNNGC 5 cut(s) 23, 48, 1325, 2028, 2295
BstMAI GTCTC 6 cut(s) 139, 744, 977, 1405, 1599, 1722
BstMWI GCNNNNNNNGC 2 cut(s) 1379, 1862
BstNI CCWGG 4 cut(s) 43, 653, 971, 2446
BstNSI RCATGY 4 cut(s) 697, 1603, 1659, 1667
BstPAI GACNNNNGTC 1 cut(s) 1208
BstSCI CCNGG 5 cut(s) 41, 651, 969, 2276, 2444
BstSFI CTRYAG 1 cut(s) 1912
BstSLI GKGCMC 1 cut(s) 1874
BstV1I GCAGC 9 cut(s) 838, 898, 1288, 1840, 1898, 1990, 2257, 2284, 2428
BstV2I GAAGAC 2 cut(s) 434, 1908
BstX2I RGATCY 3 cut(s) 839, 1759, 1987
BstXI CCANNNNNNTGG 2 cut(s) 970, 1461
BstYI RGATCY 3 cut(s) 839, 1759, 1987
Bsu15I ATCGAT 1 cut(s) 2202
BsuI GTATCC 2 cut(s) 1055, 2425
BsuRI GGCC 3 cut(s) 46, 594, 2315
BsuTUI ATCGAT 1 cut(s) 2202
BtrI CACGTC 1 cut(s) 361
BtsI GCAGTG 2 cut(s) 1094, 1921
BtsIMutI CAGTG 8 cut(s) 1094, 1286, 1401, 1571, 1616, 1921, 2226, 2515
BveI ACCTGC 1 cut(s) 1306
Cac8I GCNNGC 5 cut(s) 23, 48, 1325, 2028, 2295
CaiI CAGNNNCTG 2 cut(s) 188, 1911
CciI TCATGA 1 cut(s) 1858
Cfr10I RCCGGY 1 cut(s) 1240
Cfr13I GGNCC 3 cut(s) 199, 1124, 2280
ClaI ATCGAT 1 cut(s) 2202
Csp6I GTAC 2 cut(s) 1385, 2256
CspCI CAANNNNNGTGG 2 cut(s) 1377, 1412
CviQI GTAC 2 cut(s) 1385, 2256
DraI TTTAAA 1 cut(s) 2194
DraIII CACNNNGTG 1 cut(s) 1292
DriI GACNNNNNGTC 1 cut(s) 2230
Eam1104I CTCTTC 7 cut(s) 4, 246, 567, 816, 912, 1083, 1773
Eam1105I GACNNNNNGTC 1 cut(s) 2230
EarI CTCTTC 7 cut(s) 4, 246, 567, 816, 912, 1083, 1773
EciI GGCGGA 1 cut(s) 1716
Ecl136II GAGCTC 1 cut(s) 115
Eco147I AGGCCT 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 117
Eco31I GGTCTC 1 cut(s) 1405
Eco47I GGWCC 3 cut(s) 199, 1124, 2280
Eco53kI GAGCTC 1 cut(s) 115
Eco57I CTGAAG 4 cut(s) 210, 936, 1008, 2355
EcoICRI GAGCTC 1 cut(s) 115
EcoO109I RGGNCCY 1 cut(s) 2280
EcoRII CCWGG 4 cut(s) 41, 651, 969, 2444
EcoT38I GRGCYC 1 cut(s) 117
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 4 cut(s) 185, 313, 1216, 2266
FauNDI CATATG 2 cut(s) 512, 1311
Fnu4HI GCNGC 9 cut(s) 827, 912, 1277, 1854, 1912, 1979, 2246, 2298, 2442
FriOI GRGCYC 1 cut(s) 117
Fsp4HI GCNGC 9 cut(s) 827, 912, 1277, 1854, 1912, 1979, 2246, 2298, 2442
FspBI CTAG 8 cut(s) 354, 624, 744, 1458, 1490, 1526, 1793, 2079
GluI GCNGC 9 cut(s) 827, 912, 1277, 1854, 1912, 1979, 2246, 2298, 2442
GsaI CCCAGC 1 cut(s) 701
GsuI CTGGAG 4 cut(s) 25, 736, 810, 2422
HaeIII GGCC 3 cut(s) 46, 594, 2315
HapII CCGG 3 cut(s) 854, 1241, 2277
HindIII AAGCTT 1 cut(s) 990
HpaII CCGG 3 cut(s) 854, 1241, 2277
HphI GGTGA 7 cut(s) 359, 493, 1330, 1442, 1511, 1688, 1823
Hpy166II GTNNAC 2 cut(s) 1872, 2224
Hpy8I GTNNAC 2 cut(s) 1872, 2224
HpyAV CCTTC 9 cut(s) 70, 310, 968, 1182, 1439, 1487, 1571, 2159, 2171
HpyCH4III ACNGT 5 cut(s) 230, 1396, 1593, 1620, 2086
HpyCH4IV ACGT 1 cut(s) 360
HpyF10VI GCNNNNNNNGC 2 cut(s) 1379, 1862
HpySE526I ACGT 1 cut(s) 360
KflI GGGWCCC 1 cut(s) 2280
KpnI GGTACC 1 cut(s) 2259
LguI GCTCTTC 2 cut(s) 816, 1083
LmnI GCTCC 5 cut(s) 112, 601, 1908, 2403, 2467
Lsp1109I GCAGC 9 cut(s) 838, 898, 1288, 1840, 1898, 1990, 2257, 2284, 2428
LweI GCATC 5 cut(s) 340, 987, 1786, 1852, 2415
MaeI CTAG 8 cut(s) 354, 624, 744, 1458, 1490, 1526, 1793, 2079
MaeII ACGT 1 cut(s) 360
MaeIII GTNAC 6 cut(s) 34, 356, 614, 661, 938, 2119
MfeI CAATTG 4 cut(s) 369, 1071, 1230, 1962
MflI RGATCY 3 cut(s) 839, 1759, 1987
MhlI GDGCHC 2 cut(s) 117, 1874
MlyI GAGTC 7 cut(s) 58, 188, 548, 746, 1724, 1950, 2240
MmeI TCCRAC 2 cut(s) 1442, 1698
MroXI GAANNNNTTC 1 cut(s) 1449
MseI TTAA 9 cut(s) 129, 606, 689, 758, 947, 1013, 1470, 1583, 2193
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 3 cut(s) 854, 1241, 2277
MspR9I CCNGG 5 cut(s) 43, 653, 971, 2278, 2446
MunI CAATTG 4 cut(s) 369, 1071, 1230, 1962
MvaI CCWGG 4 cut(s) 43, 653, 971, 2446
MwoI GCNNNNNNNGC 2 cut(s) 1379, 1862
NciI CCSGG 1 cut(s) 2278
NdeI CATATG 2 cut(s) 512, 1311
NlaIV GGNNCC 5 cut(s) 201, 841, 2257, 2281, 2282
NmuCI GTSAC 3 cut(s) 356, 938, 2119
NspI RCATGY 4 cut(s) 697, 1603, 1659, 1667
NspV TTCGAA 4 cut(s) 7, 1135, 2333, 2473
PagI TCATGA 1 cut(s) 1858
PaqCI CACCTGC 1 cut(s) 1306
PceI AGGCCT 1 cut(s) 46
PciI ACATGT 1 cut(s) 1599
PciSI GCTCTTC 2 cut(s) 816, 1083
PdmI GAANNNNTTC 1 cut(s) 1449
PfeI GAWTC 5 cut(s) 185, 246, 668, 1168, 1607
PfoI TCCNGGA 1 cut(s) 969
PkrI GCNGC 9 cut(s) 828, 913, 1278, 1855, 1913, 1980, 2247, 2299, 2443
PleI GAGTC 7 cut(s) 58, 187, 547, 745, 1724, 1949, 2239
PpsI GAGTC 7 cut(s) 58, 187, 547, 745, 1724, 1949, 2239
PpuMI RGGWCCY 1 cut(s) 2280
PscI ACATGT 1 cut(s) 1599
PshAI GACNNNNGTC 1 cut(s) 1208
PshBI ATTAAT 1 cut(s) 129
Psp124BI GAGCTC 1 cut(s) 117
Psp5II RGGWCCY 1 cut(s) 2280
Psp6I CCWGG 4 cut(s) 41, 651, 969, 2444
PspFI CCCAGC 1 cut(s) 697
PspGI CCWGG 4 cut(s) 41, 651, 969, 2444
PspN4I GGNNCC 5 cut(s) 201, 841, 2257, 2281, 2282
PspPI GGNCC 3 cut(s) 199, 1124, 2280
PspPPI RGGWCCY 1 cut(s) 2280
PstI CTGCAG 1 cut(s) 1916
PstNI CAGNNNCTG 2 cut(s) 188, 1911
PsuI RGATCY 3 cut(s) 839, 1759, 1987
RsaI GTAC 2 cut(s) 1386, 2257
RsaNI GTAC 2 cut(s) 1385, 2256
SacI GAGCTC 1 cut(s) 117
SapI GCTCTTC 2 cut(s) 816, 1083
SaqAI TTAA 9 cut(s) 129, 606, 689, 758, 947, 1013, 1470, 1583, 2193
SatI GCNGC 9 cut(s) 827, 912, 1277, 1854, 1912, 1979, 2246, 2298, 2442
Sau96I GGNCC 3 cut(s) 199, 1124, 2280
SchI GAGTC 7 cut(s) 58, 188, 548, 746, 1724, 1950, 2240
ScrFI CCNGG 5 cut(s) 43, 653, 971, 2278, 2446
SduI GDGCHC 2 cut(s) 117, 1874
SfaNI GCATC 5 cut(s) 340, 987, 1786, 1852, 2415
SfcI CTRYAG 1 cut(s) 1912
SfuI TTCGAA 4 cut(s) 7, 1135, 2333, 2473
SinI GGWCC 3 cut(s) 199, 1124, 2280
SmlI CTYRAG 2 cut(s) 581, 605
SmoI CTYRAG 2 cut(s) 581, 605
SseBI AGGCCT 1 cut(s) 46
SsiI CCGC 3 cut(s) 366, 1159, 1701
SspI AATATT 1 cut(s) 1804
SspMI CTAG 8 cut(s) 354, 624, 744, 1458, 1490, 1526, 1793, 2079
SstI GAGCTC 1 cut(s) 117
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 5 cut(s) 41, 651, 969, 2276, 2444
TaaI ACNGT 5 cut(s) 230, 1396, 1593, 1620, 2086
TaiI ACGT 1 cut(s) 363
TfiI GAWTC 5 cut(s) 185, 246, 668, 1168, 1607
Tru1I TTAA 9 cut(s) 129, 606, 689, 758, 947, 1013, 1470, 1583, 2193
Tru9I TTAA 9 cut(s) 129, 606, 689, 758, 947, 1013, 1470, 1583, 2193
TscAI CASTG 7 cut(s) 1101, 1293, 1401, 1578, 1623, 1921, 2233
TseFI GTSAC 3 cut(s) 356, 938, 2119
TseI GCWGC 9 cut(s) 826, 911, 1276, 1853, 1911, 1978, 2245, 2297, 2441
Tsp45I GTSAC 3 cut(s) 356, 938, 2119
TspGWI ACGGA 1 cut(s) 1037
TspRI CASTG 7 cut(s) 1101, 1293, 1401, 1578, 1623, 1921, 2233
Vha464I CTTAAG 1 cut(s) 605
VneI GTGCAC 1 cut(s) 1870
VpaK11BI GGWCC 3 cut(s) 199, 1124, 2280
VspI ATTAAT 1 cut(s) 129
XapI RAATTY 6 cut(s) 278, 883, 1465, 1680, 1890, 2073
XbaI TCTAGA 1 cut(s) 1525
XceI RCATGY 4 cut(s) 697, 1603, 1659, 1667
XmnI GAANNNNTTC 1 cut(s) 1449
XspI CTAG 8 cut(s) 354, 624, 744, 1458, 1490, 1526, 1793, 2079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.