Rorug07G0011100

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0014735
Physical Location & Seq
Forward (+)
915342 .. 918660
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0011100.1

Sequence Viewer

Length: 1974 bp
ATGCATTCCCATCATCAAAGGCAGAGTCTTTTTTACCTCTGCTTTTTCTCCATACTAGTTTTGCTTCCATTAGCAACACCAGATCTGAGCTCCGACCGCGCCGCCCTTCTCGCTCTCCGCTCCGCCGTCGGAGGCCGGACCCTCCTCTGGGACGTGACCCGGCCCAGCCCATGTTCCTGGGCCGGAGTCAACTGCGAGGACAACCGCGTCACTGTGCTTCGTCTCCCTGGTGTGGCTCTCCACGGCACCATACCCAGTGGCATTTTCGGAAACCTGACCGGCCTTCGCACTCTCAGTCTCCGTCTCAATGCTCTCACCGGTCCTCTCCCGTCAGATCTCTCCGCCTGCGTTACTCTTCGTAACCTCTACTTGCAGGGCAACTTGTTCTCCGGCGAAATCCCCGAGTTTCTGTACAGCTTGCATGACTTGGTCCGGCTCAACTTGGCCTCCAACAACTTCTCCGGCGAGATCTCACCTTCTTTCAACAATCTGACAAGGATAAGGACACTGTACCTCGAAAACAACAAGCTTTCGGGGTCCGTTCCGGCTTTAGACCTCCCCAAGCTCGAGCAGTTCAACATTTCGAACAATTTGCTAACCGGGTCTATTCCGAAGAAGTTACGTTCTTACAAATCGAGCTCGTTTCTGGGCAACTCACTGTGTGGAGGACCTCTCGGTGCTTGTCCAGGTGAGGCGGATAATGGAGACTTCAATATCGACGGTAGCAAGAAGAAGAAAAAGCTCTCCGGTGGAGCTATTGCCGGTATTGTGATTGGATCTGTGGTTGCTTTTGTTGTGATCGTTGCGATTTTGTTCCTTCTCTGCCGAAAGAAGAGCAGCAGCAAGAAGACCAGCTCAGTCGACATTGCCAGGACAGTGAAGCACCCGGAGGTCGAGATTCCCGGCGAGAAGCTGCCGGAGCTGGAGAGCGGAGGTGGTTATGGAAATGGGTACTCGGTGGGAGCGGCGGCCGCGGCGGCGATGGTGGGGAATGGGAAGGGTGAAGCTGCTAATGCTAGTGGTGGTGCTGCTGGAGCTAAGAAGTTAATCTTTTTCGGAAATGGGCCGAGGGTGTTCGATCTGGAGGACTTGTTGAGAGCCTCGGCGGAGGTGTTGGGGAAAGGGACGTTTGGGACGGCGTACAAGGCGGTTTTGGAGGCCGGGACGGTGGTGGCGGTGAAGAGGCTCAAGGATGTGACCATTACAGAGAAGGAGTTTAAGGAAAAGATTGAATCTGTGGGAGCCATGGATCATGAGAGTTTGGTTCCTTTGAGAGCTTATTATTTCAGCAGAGATGAGAAGCTTCTTGTCTATGATTACATGCCCATGGGAAGCTTATCTGCGCTTTTGCATGGAAACAAAGGAGCAGGTAGAACTCCACTGAACTGGGAAATCAGGTCCGGCATTGCCCTTGGAGCTGCCCGTGGAATTGAATACCTACACTCTCAAGGCCCCAATGTCTCTCACGGAAACATAAAGTCATCCAACATCCTGCTTACAAAATCCTATGAAGGTCGGGTGTCTGATTTCGGCTTAGCACACCTTGTTGGACCCTCTTCCACTCCCAACAGAGTTGCTGGCTACCGAGCACCAGAGGTGACTGATCCTCGCAAGGTTTCACAGAAGGCCGATGTTTACAGCTTTGGGGTACTGCTCTTGGAGCTACTCACCGGGAAGCCCCCAACCCATGCTCTCTTGAATGAGGAAGGAGTTGACCTTCCAAGGTGGGTTCAGTCCATAGTTAAAGAAGAGTGGACTTCTGAGGTTTTTGATCTTGAGCTTCTGAGGTACCAGAACGTCGAGGAGGAGATGGTTCAGCTATTGCAACTTGCGATAGATTGTTCAGCACAGTATCCTGATAAACGCCCTTCAATATCCGAAGTGACAAGGCGCATTGAGGAGCTACGCCATTCTACATTGCGGGAAGATCAGCCCAATGCTGTCCATGATATTGATGATGGGTCTTCCCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

657

Amino Acids

70.92

Weight (kDa)

8.25

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 65 1.3e-07 Leucine rich repeat N-terminal domain
Pkinase PF00069 370 - 629 9.8e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 370 - 631 3.8e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014735)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05260
malus_domestica MD06G1174400.v1.1 MD06G1174600.v1.1
prunus_persica Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1
pyrus_communis pycom06g15570
rosa_chinensis RchiOBHm_Chr7g0193611
rosa_laevigata RLG00000004256
rosa_multiflora Rmu_sc0042944.1_g000002
rosa_roxburghii Rroxscaffold_3G00261960
rosa_rugosa Rorug07G0011000 Rorug07G0011100
rosa_samantha Rh7AG137600 Rh7BG137800 Rh7CG141400
rosa_wichuraiana Rw7G011720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
Acc36I ACCTGC 1 cut(s) 1358
Acc65I GGTACC 1 cut(s) 1788
AccB1I GGYRCC 2 cut(s) 245, 1788
AccBSI CCGCTC 3 cut(s) 120, 930, 965
AccI GTMKAC 1 cut(s) 861
AccII CGCG 3 cut(s) 99, 207, 974
AclWI GGATC 3 cut(s) 784, 1257, 1598
AcoI YGGCCR 1 cut(s) 969
AdeI CACNNNGTG 1 cut(s) 662
AfaI GTAC 6 cut(s) 413, 512, 953, 1142, 1650, 1790
AfiI CCNNNNNNNGG 3 cut(s) 147, 148, 232
AgeI ACCGGT 1 cut(s) 317
AgsI TTSAA 7 cut(s) 484, 577, 712, 1232, 1433, 1699, 1872
AhlI ACTAGT 1 cut(s) 55
AjiI CACGTC 1 cut(s) 154
AjnI CCWGG 4 cut(s) 176, 226, 685, 869
Alw21I GWGCWC 3 cut(s) 92, 641, 1591
Alw26I GTCTC 5 cut(s) 227, 302, 308, 699, 1465
AlwI GGATC 3 cut(s) 784, 1257, 1598
Ama87I CYCGRG 2 cut(s) 401, 566
ApeKI GCWGC 6 cut(s) 837, 840, 913, 1007, 1028, 1418
ArsI GACNNNNNNTTYG 2 cut(s) 10, 42
AsiGI ACCGGT 1 cut(s) 317
Asp718I GGTACC 1 cut(s) 1788
AspLEI GCGC 3 cut(s) 101, 1345, 1893
AsuC2I CCSGG 6 cut(s) 160, 601, 887, 903, 1162, 1672
AsuHPI GGTGA 7 cut(s) 307, 465, 701, 1013, 1189, 1609, 1660
AsuII TTCGAA 1 cut(s) 584
AvaI CYCGRG 2 cut(s) 401, 566
AvaII GGWCC 7 cut(s) 138, 320, 430, 537, 668, 1398, 1550
BanI GGYRCC 2 cut(s) 245, 1788
BanII GRGCYC 2 cut(s) 92, 641
BbsI GAAGAC 2 cut(s) 854, 1956
Bbv12I GWGCWC 3 cut(s) 92, 641, 1591
BbvI GCAGC 6 cut(s) 849, 852, 900, 994, 1015, 1405
BccI CCATC 4 cut(s) 18, 976, 1804, 1952
BceAI ACGGC 3 cut(s) 110, 259, 1152
BcgI CGANNNNNNTGC 2 cut(s) 574, 608
BciT130I CCWGG 4 cut(s) 178, 228, 687, 871
BciVI GTATCC 1 cut(s) 1863
BcnI CCSGG 6 cut(s) 160, 601, 887, 903, 1162, 1672
BcoDI GTCTC 5 cut(s) 227, 302, 308, 699, 1465
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 2 cut(s) 56, 1017
BfuAI ACCTGC 1 cut(s) 1358
BfuI GTATCC 1 cut(s) 1863
BglI GCCNNNNNGGC 1 cut(s) 977
BglII AGATCT 3 cut(s) 82, 334, 468
BlpI GCTNAGC 1 cut(s) 1534
Bme18I GGWCC 7 cut(s) 138, 320, 430, 537, 668, 1398, 1550
BmeT110I CYCGRG 2 cut(s) 401, 566
BmgBI CACGTC 1 cut(s) 154
BmiI GGNNCC 8 cut(s) 140, 247, 538, 1243, 1266, 1453, 1552, 1790
BmrI ACTGGG 2 cut(s) 249, 1396
BmuI ACTGGG 2 cut(s) 249, 1396
BpiI GAAGAC 2 cut(s) 854, 1956
BplI GAGNNNNNCTC 2 cut(s) 657, 689
BpmI CTGGAG 3 cut(s) 944, 1053, 1103
Bpu1102I GCTNAGC 1 cut(s) 1534
Bpu14I TTCGAA 1 cut(s) 584
BpuEI CTTGAG 3 cut(s) 1172, 1431, 1796
BpuMI CCSGG 6 cut(s) 160, 601, 887, 903, 1162, 1672
BsaWI WCCGGW 2 cut(s) 317, 746
BsaXI ACNNNNNCTCC 8 cut(s) 371, 401, 431, 443, 461, 473, 1076, 1106
Bsc4I CCNNNNNNNGG 3 cut(s) 147, 148, 232
Bse118I RCCGGY 3 cut(s) 278, 317, 761
Bse1I ACTGG 2 cut(s) 255, 1391
Bse3DI GCAATG 3 cut(s) 864, 1404, 1916
BseBI CCWGG 4 cut(s) 178, 228, 687, 871
BseGI GGATG 3 cut(s) 1198, 1481, 1488
BseLI CCNNNNNNNGG 3 cut(s) 147, 148, 232
BseMI GCAATG 3 cut(s) 864, 1404, 1916
BseMII CTCAG 5 cut(s) 77, 307, 870, 1752, 1775
BseNI ACTGG 2 cut(s) 255, 1391
BseRI GAGGAG 4 cut(s) 134, 1817, 1820, 1913
BseX3I CGGCCG 1 cut(s) 969
BseXI GCAGC 6 cut(s) 849, 852, 900, 994, 1015, 1405
BseYI CCCAGC 1 cut(s) 164
Bsh1236I CGCG 3 cut(s) 99, 207, 974
Bsh1285I CGRYCG 2 cut(s) 97, 972
BshNI GGYRCC 2 cut(s) 245, 1788
BshTI ACCGGT 1 cut(s) 317
BsiEI CGRYCG 2 cut(s) 97, 972
BsiHKAI GWGCWC 3 cut(s) 92, 641, 1591
BsiHKCI CYCGRG 2 cut(s) 401, 566
BslFI GGGAC 4 cut(s) 164, 1138, 1147, 1177
BslI CCNNNNNNNGG 3 cut(s) 147, 148, 232
BsmAI GTCTC 5 cut(s) 227, 302, 308, 699, 1465
BsmBI CGTCTC 2 cut(s) 227, 308
BsmFI GGGAC 4 cut(s) 164, 1138, 1147, 1177
BsmI GAATGC 1 cut(s) 4
BsoBI CYCGRG 2 cut(s) 401, 566
Bsp119I TTCGAA 1 cut(s) 584
Bsp1286I GDGCHC 3 cut(s) 92, 641, 1591
Bsp1407I TGTACA 1 cut(s) 411
Bsp1720I GCTNAGC 1 cut(s) 1534
Bsp19I CCATGG 2 cut(s) 1245, 1326
BspCNI CTCAG 5 cut(s) 78, 306, 869, 1753, 1776
BspFNI CGCG 3 cut(s) 99, 207, 974
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 8 cut(s) 140, 247, 538, 1243, 1266, 1453, 1552, 1790
BspMI ACCTGC 1 cut(s) 1358
BspPI GGATC 3 cut(s) 784, 1257, 1598
BspQI GCTCTTC 1 cut(s) 827
BspT104I TTCGAA 1 cut(s) 584
BspT107I GGYRCC 2 cut(s) 245, 1788
BsrBI CCGCTC 3 cut(s) 120, 930, 965
BsrDI GCAATG 3 cut(s) 864, 1404, 1916
BsrFI RCCGGY 3 cut(s) 278, 317, 761
BsrGI TGTACA 1 cut(s) 411
BsrI ACTGG 2 cut(s) 255, 1391
BssAI RCCGGY 3 cut(s) 278, 317, 761
BssT1I CCWWGG 4 cut(s) 1245, 1326, 1411, 1721
Bst2UI CCWGG 4 cut(s) 178, 228, 687, 871
Bst4CI ACNGT 7 cut(s) 214, 510, 660, 722, 877, 1168, 1851
Bst6I CTCTTC 5 cut(s) 360, 827, 1175, 1561, 1743
BstAUI TGTACA 1 cut(s) 411
BstBI TTCGAA 1 cut(s) 584
BstC8I GCNNGC 3 cut(s) 346, 419, 1579
BstDEI CTNAG 7 cut(s) 86, 293, 856, 1038, 1534, 1761, 1784
BstDSI CCRYGG 5 cut(s) 241, 972, 1245, 1326, 1423
BstF5I GGATG 3 cut(s) 1198, 1481, 1488
BstFNI CGCG 3 cut(s) 99, 207, 974
BstHHI GCGC 3 cut(s) 101, 1345, 1893
BstMAI GTCTC 5 cut(s) 227, 302, 308, 699, 1465
BstMCI CGRYCG 2 cut(s) 97, 972
BstNI CCWGG 4 cut(s) 178, 228, 687, 871
BstNSI RCATGY 1 cut(s) 1324
BstUI CGCG 3 cut(s) 99, 207, 974
BstV1I GCAGC 6 cut(s) 849, 852, 900, 994, 1015, 1405
BstV2I GAAGAC 2 cut(s) 854, 1956
BstX2I RGATCY 4 cut(s) 82, 334, 468, 776
BstXI CCANNNNNNTGG 2 cut(s) 177, 1386
BstYI RGATCY 4 cut(s) 82, 334, 468, 776
BstZI CGGCCG 1 cut(s) 969
BsuI GTATCC 1 cut(s) 1863
BtgI CCRYGG 5 cut(s) 241, 972, 1245, 1326, 1423
BtgZI GCGATG 1 cut(s) 995
BtrI CACGTC 1 cut(s) 154
BtsCI GGATG 3 cut(s) 1198, 1481, 1488
BtsIMutI CAGTG 6 cut(s) 210, 262, 506, 656, 882, 1379
BveI ACCTGC 1 cut(s) 1358
Cac8I GCNNGC 3 cut(s) 346, 419, 1579
CciI TCATGA 1 cut(s) 1252
CciNI GCGGCCGC 1 cut(s) 969
CfoI GCGC 3 cut(s) 101, 1345, 1893
Cfr10I RCCGGY 3 cut(s) 278, 317, 761
Cfr42I CCGCGG 1 cut(s) 975
CseI GACGC 1 cut(s) 196
Csp6I GTAC 6 cut(s) 412, 511, 952, 1141, 1649, 1789
CspAI ACCGGT 1 cut(s) 317
CviAII CATG 9 cut(s) 171, 422, 1246, 1253, 1321, 1327, 1352, 1688, 1946
CviQI GTAC 6 cut(s) 412, 511, 952, 1141, 1649, 1789
DdeI CTNAG 7 cut(s) 86, 293, 856, 1038, 1534, 1761, 1784
DraIII CACNNNGTG 1 cut(s) 662
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 969
EagI CGGCCG 1 cut(s) 969
Eam1104I CTCTTC 5 cut(s) 360, 827, 1175, 1561, 1743
EarI CTCTTC 5 cut(s) 360, 827, 1175, 1561, 1743
EciI GGCGGA 4 cut(s) 112, 331, 710, 1121
Ecl136II GAGCTC 2 cut(s) 90, 639
EclXI CGGCCG 1 cut(s) 969
Eco130I CCWWGG 4 cut(s) 1245, 1326, 1411, 1721
Eco24I GRGCYC 2 cut(s) 92, 641
Eco47I GGWCC 7 cut(s) 138, 320, 430, 537, 668, 1398, 1550
Eco52I CGGCCG 1 cut(s) 969
Eco53kI GAGCTC 2 cut(s) 90, 639
Eco88I CYCGRG 2 cut(s) 401, 566
EcoICRI GAGCTC 2 cut(s) 90, 639
EcoO109I RGGNCCY 2 cut(s) 668, 1451
EcoRII CCWGG 4 cut(s) 176, 226, 685, 869
EcoT14I CCWWGG 4 cut(s) 1245, 1326, 1411, 1721
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 92, 641
ErhI CCWWGG 4 cut(s) 1245, 1326, 1411, 1721
Esp3I CGTCTC 2 cut(s) 227, 308
FaeI CATG 9 cut(s) 174, 425, 1249, 1256, 1324, 1330, 1355, 1691, 1949
FalI AAGNNNNNCTT 2 cut(s) 1034, 1066
FaqI GGGAC 4 cut(s) 164, 1138, 1147, 1177
FatI CATG 9 cut(s) 170, 421, 1245, 1252, 1320, 1326, 1351, 1687, 1945
FauI CCCGC 1 cut(s) 1914
FblI GTMKAC 1 cut(s) 861
FokI GGATG 3 cut(s) 1205, 1468, 1475
FriOI GRGCYC 2 cut(s) 92, 641
FspBI CTAG 2 cut(s) 56, 1017
GlaI GCGC 3 cut(s) 100, 1344, 1892
GsaI CCCAGC 1 cut(s) 168
GsuI CTGGAG 3 cut(s) 944, 1053, 1103
HgaI GACGC 1 cut(s) 196
HhaI GCGC 3 cut(s) 101, 1345, 1893
Hin1II CATG 9 cut(s) 174, 425, 1249, 1256, 1324, 1330, 1355, 1691, 1949
Hin6I GCGC 3 cut(s) 99, 1343, 1891
HinP1I GCGC 3 cut(s) 99, 1343, 1891
HincII GTYRAC 3 cut(s) 190, 862, 1714
HindII GTYRAC 3 cut(s) 190, 862, 1714
HindIII AAGCTT 3 cut(s) 527, 1301, 1333
HinfI GANTC 4 cut(s) 25, 186, 898, 1232
HphI GGTGA 7 cut(s) 307, 465, 701, 1013, 1189, 1609, 1660
Hpy166II GTNNAC 5 cut(s) 190, 862, 1636, 1714, 1755
Hpy188III TCNNGA 7 cut(s) 895, 1082, 1253, 1696, 1775, 1856, 1968
Hpy8I GTNNAC 5 cut(s) 190, 862, 1636, 1714, 1755
Hpy99I CGWCG 3 cut(s) 131, 722, 1802
HpyCH4III ACNGT 7 cut(s) 214, 510, 660, 722, 877, 1168, 1851
HpyCH4IV ACGT 4 cut(s) 153, 622, 1127, 1797
HpyCH4V TGCA 5 cut(s) 4, 373, 421, 1351, 1825
HpyF3I CTNAG 7 cut(s) 86, 293, 856, 1038, 1534, 1761, 1784
HpySE526I ACGT 4 cut(s) 153, 622, 1127, 1797
Hsp92II CATG 9 cut(s) 174, 425, 1249, 1256, 1324, 1330, 1355, 1691, 1949
HspAI GCGC 3 cut(s) 99, 1343, 1891
KpnI GGTACC 1 cut(s) 1792
KspI CCGCGG 1 cut(s) 975
LguI GCTCTTC 1 cut(s) 827
Lsp1109I GCAGC 6 cut(s) 849, 852, 900, 994, 1015, 1405
MaeI CTAG 2 cut(s) 56, 1017
MaeII ACGT 4 cut(s) 153, 622, 1127, 1797
MaeIII GTNAC 8 cut(s) 154, 208, 349, 359, 618, 1195, 1597, 1882
MbiI CCGCTC 3 cut(s) 120, 930, 965
MflI RGATCY 4 cut(s) 82, 334, 468, 776
MhlI GDGCHC 3 cut(s) 92, 641, 1591
MluCI AATT 2 cut(s) 589, 1428
MlyI GAGTC 2 cut(s) 34, 195
MmeI TCCRAC 5 cut(s) 109, 117, 474, 1509, 1528
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 1046, 1218, 1743
MslI CAYNNNNRTG 1 cut(s) 1325
MspA1I CMGCKG 1 cut(s) 974
Mva1269I GAATGC 1 cut(s) 4
MvaI CCWGG 4 cut(s) 178, 228, 687, 871
MvnI CGCG 3 cut(s) 99, 207, 974
NciI CCSGG 6 cut(s) 160, 601, 887, 903, 1162, 1672
NcoI CCATGG 2 cut(s) 1245, 1326
NlaIII CATG 9 cut(s) 174, 425, 1249, 1256, 1324, 1330, 1355, 1691, 1949
NlaIV GGNNCC 8 cut(s) 140, 247, 538, 1243, 1266, 1453, 1552, 1790
NmeAIII GCCGAG 2 cut(s) 1082, 1092
NmuCI GTSAC 5 cut(s) 154, 208, 1195, 1597, 1882
NotI GCGGCCGC 1 cut(s) 969
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1324
NspV TTCGAA 1 cut(s) 584
PaeR7I CTCGAG 1 cut(s) 566
PagI TCATGA 1 cut(s) 1252
PciSI GCTCTTC 1 cut(s) 827
PctI GAATGC 1 cut(s) 4
PfeI GAWTC 2 cut(s) 898, 1232
PflFI GACNNNGTC 1 cut(s) 428
PinAI ACCGGT 1 cut(s) 317
PleI GAGTC 2 cut(s) 33, 194
PpsI GAGTC 2 cut(s) 33, 194
PpuMI RGGWCCY 1 cut(s) 668
Psp124BI GAGCTC 2 cut(s) 92, 641
Psp5II RGGWCCY 1 cut(s) 668
Psp6I CCWGG 4 cut(s) 176, 226, 685, 869
PspFI CCCAGC 1 cut(s) 164
PspGI CCWGG 4 cut(s) 176, 226, 685, 869
PspN4I GGNNCC 8 cut(s) 140, 247, 538, 1243, 1266, 1453, 1552, 1790
PspPPI RGGWCCY 1 cut(s) 668
PspXI VCTCGAGB 1 cut(s) 566
PsuI RGATCY 4 cut(s) 82, 334, 468, 776
PsyI GACNNNGTC 1 cut(s) 428
RsaI GTAC 6 cut(s) 413, 512, 953, 1142, 1650, 1790
RsaNI GTAC 6 cut(s) 412, 511, 952, 1141, 1649, 1789
RseI CAYNNNNRTG 1 cut(s) 1325
SacI GAGCTC 2 cut(s) 92, 641
SacII CCGCGG 1 cut(s) 975
SalI GTCGAC 1 cut(s) 860
SapI GCTCTTC 1 cut(s) 827
SaqAI TTAA 3 cut(s) 1046, 1218, 1743
SchI GAGTC 2 cut(s) 34, 195
SduI GDGCHC 3 cut(s) 92, 641, 1591
Sfr274I CTCGAG 1 cut(s) 566
Sfr303I CCGCGG 1 cut(s) 975
SfuI TTCGAA 1 cut(s) 584
SgrBI CCGCGG 1 cut(s) 975
SinI GGWCC 7 cut(s) 138, 320, 430, 537, 668, 1398, 1550
SlaI CTCGAG 1 cut(s) 566
SmiMI CAYNNNNRTG 1 cut(s) 1325
SmlI CTYRAG 4 cut(s) 566, 1187, 1446, 1775
SmoI CTYRAG 4 cut(s) 566, 1187, 1446, 1775
SpeI ACTAGT 1 cut(s) 55
Sse9I AATT 2 cut(s) 589, 1428
SspMI CTAG 2 cut(s) 56, 1017
SstI GAGCTC 2 cut(s) 92, 641
StyI CCWWGG 4 cut(s) 1245, 1326, 1411, 1721
TaaI ACNGT 7 cut(s) 214, 510, 660, 722, 877, 1168, 1851
TaiI ACGT 4 cut(s) 156, 625, 1130, 1800
TaqI TCGA 9 cut(s) 516, 567, 584, 635, 717, 861, 894, 1077, 1800
TasI AATT 2 cut(s) 589, 1428
TatI WGTACW 1 cut(s) 411
TauI GCSGC 6 cut(s) 104, 968, 971, 974, 977, 980
TfiI GAWTC 2 cut(s) 898, 1232
Tru1I TTAA 3 cut(s) 1046, 1218, 1743
Tru9I TTAA 3 cut(s) 1046, 1218, 1743
TscAI CASTG 6 cut(s) 217, 262, 513, 663, 882, 1386
TseFI GTSAC 5 cut(s) 154, 208, 1195, 1597, 1882
TseI GCWGC 6 cut(s) 837, 840, 913, 1007, 1028, 1418
Tsp45I GTSAC 5 cut(s) 154, 208, 1195, 1597, 1882
TspDTI ATGAA 1 cut(s) 1524
TspGWI ACGGA 3 cut(s) 290, 529, 1482
TspRI CASTG 6 cut(s) 217, 262, 513, 663, 882, 1386
Tth111I GACNNNGTC 1 cut(s) 428
VpaK11BI GGWCC 7 cut(s) 138, 320, 430, 537, 668, 1398, 1550
XceI RCATGY 1 cut(s) 1324
XhoI CTCGAG 1 cut(s) 566
XmiI GTMKAC 1 cut(s) 861
XspI CTAG 2 cut(s) 56, 1017
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.