Rh7BG137800

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0014735
Physical Location & Seq
Forward (+)
10267712 .. 10271855
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG137800.1

Sequence Viewer

Length: 2514 bp
ATGGCTGCTGTGAGAGTGAGACCACAAGGCTCGTGCTGCTACAAGTTCAGAGGTGGTGCTACAACGACGCCTTGCTCAGTTTCTTTTGCTTCAAAGTTTCAATCTTTATGTTGCAAATCACAGTTCCTGGGGAACCCATCTCGGAAATCGAATTCCAGAGGTGGGTTTTCGAGGAATTGTTCCCGGATTGATGTTGTTTCGGGCGGTGAGCTGATCAAGAGGTACGTTGAGAATGGGAATTGCGAGGATGCGATAGTGGTTTATGTTGAAATGCTTGAACTTGGTTTGCCTGTAGCTGAGGAATTTCAGTTCTTTCCGATTTTGATTAAGGCCTTTGGGGGGTTCTGTGATGTGGGCAAGGCTAGGGAGATTCATGGGCATGTGTTGAAATTGGGGGTTTTGGGCGATGTTTACGATGCCAATTCGATTTTGGGGGTTTATTGGAAATGTGGGGAGGTTGAGGATGCGGTTCAGATGTTTGAGAAAATGCCCGAGAGGGATTTGGTGTCTTGGAATACAATGATATCTGGGTTTTGCCATTCAGGGGATTATGTGAGCTCGTTGGGGATGTTTAGTCGGATGGTTCGGGGGGATCATTGGGTGTTGCCTAATCGGGTGGCTTGCCTTTCGGCTCTCACTTCGTGCTCTTCCGTTCAGTCTTTGGTTCATGGCAGAGAGATTCATGGCTTTGCTCTGAAGCGCTGGCTGCATGCTGATCAGTTTATGGTTAGTGGGCTGATTGATATGTACATGAAATGTGGGGATGTGAGGAATGCGGAATGTGTTTATAGGAGCGTTATTGGTGAAGCGTGTATTAGAGGAAATACAGTGATATGGAATGTGATGATTTCGGGCTATGTCTCTAATGGGTGTTGGCCGCAGGCGGTGGAGTTGTTTCTAGAGATGTTGGCGATTGGGTTGTTACCCGATACTTCCACAATGGTGGCCATTACAGGTTTGTGCTCTCAGCTAATGGATTTAGCATTCGGAAAGCAGATCCATAAATTCTGTTTGAGCACTCAATTGAACATCACTGATGTACGAGTTGAAACAGCTCTTATGGACATGTATTTCAAATGTGGTGATAGTACAACTGGTCTTGAAATCTTCAGAAGGTCCCTGAATCGTAACACGGTCATGTGGGGCGCCGCCATCTCAAATTTTGCTCAAAGTAGTCATCCTCGTGAGGCATTGAATCTGTTTCATGACTATATTTTAGAATATGGCTTTGTGGATTCTGTCATAATCTTGGCTGTTCTGCGGGCTTGTTCATCCCTGGCTGTTAAGTCTATAGGGATGGAAATTCATGGGCTACTAGTGAAATTGGGGTTTGATTCAGACCATTTTGTTGCCAGTGCATTAGTTGATTTTTATGCAAAAACCAGAGATATTGAGTCTGCTCAAAAAGTATTTCACAGACTACCATCTAGAGATTTGGTGTCATGGAATGCCTTGATATCCGGATATACTCAGAATGAGTATCTAGATGAAGCTTTAAAGGCATTCCTTGACATGCAACTTGAAGAAATTAGACCTAATACTGTGACAGTTGCTAGTATTCTGTCAGTTTGTGCTCAGTTGTCAATCATGATGTTGTGTAAGGAGGTTCATGGTTACCTATTACGGCAAAAATTTGAGTCCAATGTTCTTGTGAGCAATTCCCTGATGACTACCTATGCAAAATGTGGAGACATAAAGAGCTCAAGGAGTGTGTTTGTGAAAATGCCTGAAAGAAATTTAGTTTCATGGAACTCAATTCTTCTGGGGTTAGGAATGCATGGCCATGCAGATGAGACATTTGCTTTATTTGAAAAAATGGAAGCGGCAGGATTGGAGCCTGATCATGCAACTTTTACAGCTCTTCTTTCGGCATGCAGCCATGCAGGGAGGATAGAAGAGGGGCTGAAGTATTTTCAGCGTATGGTAGAAGTTTACAAAATTGAGCCTCAACTTGAACAGTACACCTGCATGGTTGATCTTTTAGGCCGAGCTGGCCATCTAAAGCAAGCATATGATATTATTTCAACAATGCCTTGTGCCTCCGATGATCGTATATGGGGATCATTGCTTGGATCATGCAAAATTCATGGTGATGGAAGACTGGCAGAAGTTGTGGCTGATCATATCTTTAAACTGGATCCTACTAATATTGGCTACCGTACACTTCTTGCAAATTTGTACGAAGATTATGGGAAATGGAATGAAGTTACCAGGGTTAGATCAGACATCAAAGGTGTGGGATTCAAGAAGACGCCTGGGTGTAGTTGGATTGAAGTTGATAACAATCTCCATACCTTTACTGCAGGTGATCATTCTCATAATGAGTCAGAGGAGATATATTTTACAATAGAAAATCTTACAACTGAAATTAGGAAGGCAGGATATATCCCTCAATTACTGACTGTGGGTGAGGGGCTTGATGAGGTTCTTGATGAAGATCTTACATCATCTAGGGACAAGGGTTTGTTGTTTCTGGTTGCAAGTACAAACAATCACCAACAAGTTTCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

837

Amino Acids

93.15

Weight (kDa)

5.85

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 169 - 196 1.3e-06 PPR repeat
PPR_2 PF13041 275 - 321 7.4e-08 PPR repeat family
PPR PF01535 277 - 306 2.7e-07 PPR repeat
PPR_2 PF13041 478 - 525 1.2e-09 PPR repeat family
PPR PF01535 480 - 507 4.2e-06 PPR repeat
PPR_2 PF13041 579 - 626 1.3e-10 PPR repeat family
PPR_long PF17177 594 - 677 4.8e-07 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 698 - 758 4.9e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014735)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05260
malus_domestica MD06G1174400.v1.1 MD06G1174600.v1.1
prunus_persica Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1
pyrus_communis pycom06g15570
rosa_chinensis RchiOBHm_Chr7g0193611
rosa_laevigata RLG00000004256
rosa_multiflora Rmu_sc0042944.1_g000002
rosa_roxburghii Rroxscaffold_3G00261960
rosa_rugosa Rorug07G0011000 Rorug07G0011100
rosa_samantha Rh7AG137600 Rh7BG137800 Rh7CG141400
rosa_wichuraiana Rw7G011720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1973, 2294
Acc36I ACCTGC 2 cut(s) 1973, 2294
AccB1I GGYRCC 1 cut(s) 1145
AccIII TCCGGA 1 cut(s) 1460
AciI CCGC 8 cut(s) 204, 467, 776, 878, 884, 1149, 1261, 1823
AclWI GGATC 6 cut(s) 600, 991, 2068, 2080, 2132, 2145
AcoI YGGCCR 4 cut(s) 875, 945, 1780, 1993
AcsI RAATTY 9 cut(s) 151, 302, 1004, 1159, 1302, 1631, 1735, 2082, 2173
AcuI CTGAAG 3 cut(s) 716, 1093, 1925
AcyI GRCGYC 3 cut(s) 68, 1146, 2252
AdeI CACNNNGTG 1 cut(s) 642
AfaI GTAC 8 cut(s) 224, 749, 1041, 1090, 1961, 2161, 2180, 2485
AfeI AGCGCT 1 cut(s) 701
AfiI CCNNNNNNNGG 3 cut(s) 162, 339, 544
AflIII ACRYGT 1 cut(s) 1065
AhlI ACTAGT 1 cut(s) 1315
AjnI CCWGG 4 cut(s) 126, 1275, 2210, 2254
AleI CACNNNNGTG 1 cut(s) 941
AloI GAACNNNNNNTCC 2 cut(s) 293, 325
AluBI AGCT 9 cut(s) 211, 296, 558, 970, 1055, 1493, 1701, 1859, 1991
AluI AGCT 9 cut(s) 211, 296, 558, 970, 1055, 1493, 1701, 1859, 1991
Alw21I GWGCWC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
Alw26I GTCTC 4 cut(s) 13, 865, 1683, 1787
AlwI GGATC 6 cut(s) 600, 991, 2068, 2080, 2132, 2145
AlwNI CAGNNNCTG 1 cut(s) 127
Ama87I CYCGRG 1 cut(s) 491
Aor13HI TCCGGA 1 cut(s) 1460
Aor51HI AGCGCT 1 cut(s) 701
AoxI GGCC 6 cut(s) 330, 875, 945, 1780, 1984, 1993
ApeKI GCWGC 4 cut(s) 5, 36, 706, 1875
ApoI RAATTY 9 cut(s) 151, 302, 1004, 1159, 1302, 1631, 1735, 2082, 2173
AspLEI GCGC 2 cut(s) 702, 1148
AspS9I GGNCC 1 cut(s) 1116
AsuC2I CCSGG 1 cut(s) 184
AsuHPI GGTGA 7 cut(s) 218, 815, 1094, 2102, 2318, 2420, 2486
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 1 cut(s) 1116
BalI TGGCCA 3 cut(s) 947, 1782, 1995
BamHI GGATCC 1 cut(s) 2137
BanI GGYRCC 1 cut(s) 1145
BanII GRGCYC 2 cut(s) 560, 1703
BauI CACGAG 2 cut(s) 31, 1182
BbsI GAAGAC 2 cut(s) 2104, 2255
Bbv12I GWGCWC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
BbvCI CCTCAGC 1 cut(s) 297
BbvI GCAGC 3 cut(s) 23, 693, 1887
BccI CCATC 7 cut(s) 145, 574, 1160, 1291, 1432, 2004, 2087
BceAI ACGGC 1 cut(s) 1640
BciT130I CCWGG 4 cut(s) 128, 1277, 2212, 2256
BclI TGATCA 5 cut(s) 213, 715, 1840, 2119, 2308
BcnI CCSGG 1 cut(s) 184
BcoDI GTCTC 4 cut(s) 13, 865, 1683, 1787
BcuI ACTAGT 1 cut(s) 1315
BfaI CTAG 7 cut(s) 363, 899, 1316, 1428, 1484, 1554, 2451
BfmI CTRYAG 3 cut(s) 291, 1290, 2301
BfoI RGCGCY 2 cut(s) 703, 1149
BfuAI ACCTGC 2 cut(s) 1973, 2294
BglI GCCNNNNNGGC 1 cut(s) 1992
BglII AGATCT 1 cut(s) 2437
BisI GCNGC 7 cut(s) 6, 37, 707, 878, 1149, 1824, 1876
BlsI GCNGC 7 cut(s) 7, 38, 708, 879, 1150, 1825, 1877
Bme1390I CCNGG 5 cut(s) 128, 184, 1277, 2212, 2256
Bme18I GGWCC 1 cut(s) 1116
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 1 cut(s) 1116
BmiI GGNNCC 5 cut(s) 134, 1118, 1147, 1836, 2139
BmrFI CCNGG 5 cut(s) 128, 184, 1277, 2212, 2256
BmsI GCATC 3 cut(s) 238, 406, 454
BpiI GAAGAC 2 cut(s) 2104, 2255
Bpu10I CCTNAGC 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 1687
BpuMI CCSGG 1 cut(s) 184
BsaBI GATNNNNATC 2 cut(s) 2283, 2436
BsaHI GRCGYC 3 cut(s) 68, 1146, 2252
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 127, 1275, 2211, 2255
BsaWI WCCGGW 1 cut(s) 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 162, 339, 544
Bse1I ACTGG 4 cut(s) 1099, 1353, 2106, 2139
Bse3DI GCAATG 1 cut(s) 2063
Bse8I GATNNNNATC 2 cut(s) 2283, 2436
BseAI TCCGGA 1 cut(s) 1460
BseBI CCWGG 4 cut(s) 128, 1277, 2212, 2256
BseDI CCNNGG 4 cut(s) 127, 1275, 2211, 2255
BseGI GGATG 8 cut(s) 253, 469, 573, 585, 769, 1177, 1271, 1302
BseJI GATNNNNATC 2 cut(s) 2283, 2436
BseLI CCNNNNNNNGG 3 cut(s) 162, 339, 544
BseMI GCAATG 1 cut(s) 2063
BseMII CTCAG 5 cut(s) 90, 288, 980, 1484, 1589
BseNI ACTGG 4 cut(s) 1099, 1353, 2106, 2139
BseRI GAGGAG 1 cut(s) 2345
BseXI GCAGC 3 cut(s) 23, 693, 1887
BshFI GGCC 6 cut(s) 332, 877, 947, 1782, 1986, 1995
BshNI GGYRCC 1 cut(s) 1145
BsiHKAI GWGCWC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 2 cut(s) 184, 1461
BslFI GGGAC 2 cut(s) 1102, 2468
BslI CCNNNNNNNGG 3 cut(s) 162, 339, 544
BsmAI GTCTC 4 cut(s) 13, 865, 1683, 1787
BsmFI GGGAC 2 cut(s) 1102, 2468
BsmI GAATGC 5 cut(s) 778, 983, 1453, 1502, 1779
BsnI GGCC 6 cut(s) 332, 877, 947, 1782, 1986, 1995
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 491
Bsp1286I GDGCHC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
Bsp13I TCCGGA 1 cut(s) 1460
Bsp1407I TGTACA 1 cut(s) 747
BspACI CCGC 8 cut(s) 204, 467, 776, 878, 884, 1149, 1261, 1823
BspANI GGCC 6 cut(s) 332, 877, 947, 1782, 1986, 1995
BspCNI CTCAG 5 cut(s) 89, 289, 979, 1483, 1588
BspEI TCCGGA 1 cut(s) 1460
BspHI TCATGA 2 cut(s) 1204, 1587
BspLI GGNNCC 5 cut(s) 134, 1118, 1147, 1836, 2139
BspMAI CTGCAG 1 cut(s) 2305
BspMI ACCTGC 2 cut(s) 1973, 2294
BspPI GGATC 6 cut(s) 600, 991, 2068, 2080, 2132, 2145
BspQI GCTCTTC 2 cut(s) 652, 1866
BspT107I GGYRCC 1 cut(s) 1145
BspTNI GGTCTC 1 cut(s) 13
BsrDI GCAATG 1 cut(s) 2063
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 4 cut(s) 1099, 1353, 2106, 2139
BssECI CCNNGG 4 cut(s) 127, 1275, 2211, 2255
BssNI GRCGYC 3 cut(s) 68, 1146, 2252
BssSI CACGAG 2 cut(s) 31, 1182
Bst2BI CACGAG 2 cut(s) 31, 1182
Bst2UI CCWGG 4 cut(s) 128, 1277, 2212, 2256
Bst4CI ACNGT 8 cut(s) 123, 829, 1135, 1543, 1549, 1959, 2159, 2404
Bst6I CTCTTC 3 cut(s) 652, 1866, 1890
BstACI GRCGYC 3 cut(s) 68, 1146, 2252
BstAUI TGTACA 1 cut(s) 747
BstC8I GCNNGC 8 cut(s) 622, 704, 711, 882, 1263, 1873, 1993, 2007
BstDEI CTNAG 5 cut(s) 76, 297, 966, 1470, 1575
BstEII GGTNACC 1 cut(s) 1613
BstF5I GGATG 8 cut(s) 253, 469, 573, 585, 769, 1177, 1271, 1302
BstH2I RGCGCY 2 cut(s) 703, 1149
BstHHI GCGC 2 cut(s) 702, 1148
BstMAI GTCTC 4 cut(s) 13, 865, 1683, 1787
BstMWI GCNNNNNNNGC 4 cut(s) 36, 706, 1499, 1992
BstNI CCWGG 4 cut(s) 128, 1277, 2212, 2256
BstNSI RCATGY 5 cut(s) 383, 713, 1069, 1516, 1875
BstPI GGTNACC 1 cut(s) 1613
BstSCI CCNGG 5 cut(s) 126, 182, 1275, 2210, 2254
BstSFI CTRYAG 3 cut(s) 291, 1290, 2301
BstV1I GCAGC 3 cut(s) 23, 693, 1887
BstV2I GAAGAC 2 cut(s) 2104, 2255
BstX2I RGATCY 3 cut(s) 996, 2137, 2437
BstXI CCANNNNNNTGG 1 cut(s) 943
BstYI RGATCY 3 cut(s) 996, 2137, 2437
BsuRI GGCC 6 cut(s) 332, 877, 947, 1782, 1986, 1995
BtgZI GCGATG 1 cut(s) 420
BtsCI GGATG 8 cut(s) 253, 469, 573, 585, 769, 1177, 1271, 1302
BtsIMutI CAGTG 3 cut(s) 834, 1032, 1360
BveI ACCTGC 2 cut(s) 1973, 2294
Cac8I GCNNGC 8 cut(s) 622, 704, 711, 882, 1263, 1873, 1993, 2007
CaiI CAGNNNCTG 1 cut(s) 127
CciI TCATGA 2 cut(s) 1204, 1587
CfoI GCGC 2 cut(s) 702, 1148
Cfr13I GGNCC 1 cut(s) 1116
CseI GACGC 2 cut(s) 76, 2260
Csp6I GTAC 8 cut(s) 223, 748, 1040, 1089, 1960, 2160, 2179, 2484
CviQI GTAC 8 cut(s) 223, 748, 1040, 1089, 1960, 2160, 2179, 2484
DdeI CTNAG 5 cut(s) 76, 297, 966, 1470, 1575
DinI GGCGCC 1 cut(s) 1147
DraI TTTAAA 2 cut(s) 1497, 2131
DraIII CACNNNGTG 1 cut(s) 642
EaeI YGGCCR 4 cut(s) 875, 945, 1780, 1993
Eam1104I CTCTTC 3 cut(s) 652, 1866, 1890
EarI CTCTTC 3 cut(s) 652, 1866, 1890
Ecl136II GAGCTC 2 cut(s) 558, 1701
Eco147I AGGCCT 1 cut(s) 332
Eco24I GRGCYC 2 cut(s) 560, 1703
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 525, 1458
Eco47I GGWCC 1 cut(s) 1116
Eco47III AGCGCT 1 cut(s) 701
Eco53kI GAGCTC 2 cut(s) 558, 1701
Eco57I CTGAAG 3 cut(s) 716, 1093, 1925
Eco88I CYCGRG 1 cut(s) 491
Eco91I GGTNACC 1 cut(s) 1613
EcoICRI GAGCTC 2 cut(s) 558, 1701
EcoO109I RGGNCCY 1 cut(s) 1116
EcoO65I GGTNACC 1 cut(s) 1613
EcoRI GAATTC 1 cut(s) 151
EcoRII CCWGG 4 cut(s) 126, 1275, 2210, 2254
EcoRV GATATC 2 cut(s) 525, 1458
EcoT22I ATGCAT 1 cut(s) 1779
EcoT38I GRGCYC 2 cut(s) 560, 1703
EgeI GGCGCC 1 cut(s) 1147
EheI GGCGCC 1 cut(s) 1147
FaqI GGGAC 2 cut(s) 1102, 2468
FauI CCCGC 1 cut(s) 1254
FauNDI CATATG 1 cut(s) 2011
FbaI TGATCA 5 cut(s) 213, 715, 1840, 2119, 2308
Fnu4HI GCNGC 7 cut(s) 6, 37, 707, 878, 1149, 1824, 1876
FokI GGATG 8 cut(s) 260, 476, 580, 592, 776, 1164, 1258, 1309
FriOI GRGCYC 2 cut(s) 560, 1703
Fsp4HI GCNGC 7 cut(s) 6, 37, 707, 878, 1149, 1824, 1876
FspBI CTAG 7 cut(s) 363, 899, 1316, 1428, 1484, 1554, 2451
GlaI GCGC 2 cut(s) 701, 1147
GluI GCNGC 7 cut(s) 6, 37, 707, 878, 1149, 1824, 1876
HaeII RGCGCY 2 cut(s) 703, 1149
HaeIII GGCC 6 cut(s) 332, 877, 947, 1782, 1986, 1995
HapII CCGG 2 cut(s) 184, 1461
HgaI GACGC 2 cut(s) 76, 2260
HhaI GCGC 2 cut(s) 702, 1148
Hin1I GRCGYC 3 cut(s) 68, 1146, 2252
Hin6I GCGC 2 cut(s) 700, 1146
HinP1I GCGC 2 cut(s) 700, 1146
HindIII AAGCTT 1 cut(s) 1491
HpaII CCGG 2 cut(s) 184, 1461
HphI GGTGA 7 cut(s) 218, 815, 1094, 2102, 2318, 2420, 2486
Hpy166II GTNNAC 4 cut(s) 412, 1933, 1962, 2162
Hpy8I GTNNAC 4 cut(s) 412, 1933, 1962, 2162
Hpy99I CGWCG 1 cut(s) 70
HpyAV CCTTC 2 cut(s) 1107, 2368
HpyCH4III ACNGT 8 cut(s) 123, 829, 1135, 1543, 1549, 1959, 2159, 2404
HpyCH4IV ACGT 1 cut(s) 225
HpyF10VI GCNNNNNNNGC 4 cut(s) 36, 706, 1499, 1992
HpyF3I CTNAG 5 cut(s) 76, 297, 966, 1470, 1575
HpySE526I ACGT 1 cut(s) 225
Hsp92I GRCGYC 3 cut(s) 68, 1146, 2252
HspAI GCGC 2 cut(s) 700, 1146
KasI GGCGCC 1 cut(s) 1145
Kpn2I TCCGGA 1 cut(s) 1460
Ksp22I TGATCA 5 cut(s) 213, 715, 1840, 2119, 2308
LguI GCTCTTC 2 cut(s) 652, 1866
LmnI GCTCC 2 cut(s) 792, 1834
Lsp1109I GCAGC 3 cut(s) 23, 693, 1887
LweI GCATC 3 cut(s) 238, 406, 454
MaeI CTAG 7 cut(s) 363, 899, 1316, 1428, 1484, 1554, 2451
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 5 cut(s) 921, 1127, 1543, 1613, 2206
MfeI CAATTG 1 cut(s) 1022
MflI RGATCY 3 cut(s) 996, 2137, 2437
MhlI GDGCHC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
MlsI TGGCCA 3 cut(s) 947, 1782, 1995
MluNI TGGCCA 3 cut(s) 947, 1782, 1995
Mly113I GGCGCC 1 cut(s) 1146
MlyI GAGTC 3 cut(s) 1403, 1646, 2333
MmeI TCCRAC 2 cut(s) 557, 2246
Mox20I TGGCCA 3 cut(s) 947, 1782, 1995
Mph1103I ATGCAT 1 cut(s) 1779
MroI TCCGGA 1 cut(s) 1460
MscI TGGCCA 3 cut(s) 947, 1782, 1995
MseI TTAA 4 cut(s) 327, 1284, 1496, 2130
MslI CAYNNNNRTG 8 cut(s) 378, 941, 1136, 1182, 1782, 1788, 1967, 2091
Msp20I TGGCCA 3 cut(s) 947, 1782, 1995
MspI CCGG 2 cut(s) 184, 1461
MspR9I CCNGG 5 cut(s) 128, 184, 1277, 2212, 2256
MunI CAATTG 1 cut(s) 1022
Mva1269I GAATGC 5 cut(s) 778, 983, 1453, 1502, 1779
MvaI CCWGG 4 cut(s) 128, 1277, 2212, 2256
MwoI GCNNNNNNNGC 4 cut(s) 36, 706, 1499, 1992
NarI GGCGCC 1 cut(s) 1146
NciI CCSGG 1 cut(s) 184
NdeI CATATG 1 cut(s) 2011
NlaIV GGNNCC 5 cut(s) 134, 1118, 1147, 1836, 2139
NmeAIII GCCGAG 1 cut(s) 2012
NmuCI GTSAC 1 cut(s) 1543
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 5 cut(s) 383, 713, 1069, 1516, 1875
OliI CACNNNNGTG 1 cut(s) 941
PaeI GCATGC 2 cut(s) 713, 1875
PagI TCATGA 2 cut(s) 1204, 1587
PaqCI CACCTGC 2 cut(s) 1973, 2294
PceI AGGCCT 1 cut(s) 332
PciI ACATGT 1 cut(s) 1065
PciSI GCTCTTC 2 cut(s) 652, 1866
PctI GAATGC 5 cut(s) 778, 983, 1453, 1502, 1779
PfeI GAWTC 7 cut(s) 370, 679, 1123, 1195, 1235, 1334, 2241
PfoI TCCNGGA 1 cut(s) 182
PkrI GCNGC 7 cut(s) 7, 38, 708, 879, 1150, 1825, 1877
PleI GAGTC 3 cut(s) 1402, 1645, 2332
PluTI GGCGCC 1 cut(s) 1149
PpsI GAGTC 3 cut(s) 1402, 1645, 2332
PpuMI RGGWCCY 1 cut(s) 1116
PscI ACATGT 1 cut(s) 1065
Psp124BI GAGCTC 2 cut(s) 560, 1703
Psp5II RGGWCCY 1 cut(s) 1116
Psp6I CCWGG 4 cut(s) 126, 1275, 2210, 2254
PspEI GGTNACC 1 cut(s) 1613
PspGI CCWGG 4 cut(s) 126, 1275, 2210, 2254
PspN4I GGNNCC 5 cut(s) 134, 1118, 1147, 1836, 2139
PspPI GGNCC 1 cut(s) 1116
PspPPI RGGWCCY 1 cut(s) 1116
PstI CTGCAG 1 cut(s) 2305
PstNI CAGNNNCTG 1 cut(s) 127
PsuI RGATCY 3 cut(s) 996, 2137, 2437
RsaI GTAC 8 cut(s) 224, 749, 1041, 1090, 1961, 2161, 2180, 2485
RsaNI GTAC 8 cut(s) 223, 748, 1040, 1089, 1960, 2160, 2179, 2484
RseI CAYNNNNRTG 8 cut(s) 378, 941, 1136, 1182, 1782, 1788, 1967, 2091
SacI GAGCTC 2 cut(s) 560, 1703
SapI GCTCTTC 2 cut(s) 652, 1866
SaqAI TTAA 4 cut(s) 327, 1284, 1496, 2130
SatI GCNGC 7 cut(s) 6, 37, 707, 878, 1149, 1824, 1876
Sau96I GGNCC 1 cut(s) 1116
SchI GAGTC 3 cut(s) 1403, 1646, 2333
ScrFI CCNGG 5 cut(s) 128, 184, 1277, 2212, 2256
SduI GDGCHC 6 cut(s) 560, 647, 965, 1019, 1576, 1703
SfaNI GCATC 3 cut(s) 238, 406, 454
SfcI CTRYAG 3 cut(s) 291, 1290, 2301
SfiI GGCCNNNNNGGCC 1 cut(s) 1992
SfoI GGCGCC 1 cut(s) 1147
SinI GGWCC 1 cut(s) 1116
SmiMI CAYNNNNRTG 8 cut(s) 378, 941, 1136, 1182, 1782, 1788, 1967, 2091
SmlI CTYRAG 1 cut(s) 1702
SmoI CTYRAG 1 cut(s) 1702
SpeI ACTAGT 1 cut(s) 1315
SphI GCATGC 2 cut(s) 713, 1875
SseBI AGGCCT 1 cut(s) 332
SsiI CCGC 8 cut(s) 204, 467, 776, 878, 884, 1149, 1261, 1823
SspDI GGCGCC 1 cut(s) 1145
SspI AATATT 1 cut(s) 2149
SspMI CTAG 7 cut(s) 363, 899, 1316, 1428, 1484, 1554, 2451
SstI GAGCTC 2 cut(s) 560, 1703
StuI AGGCCT 1 cut(s) 332
StyD4I CCNGG 5 cut(s) 126, 182, 1275, 2210, 2254
TaaI ACNGT 8 cut(s) 123, 829, 1135, 1543, 1549, 1959, 2159, 2404
TaiI ACGT 1 cut(s) 228
TaqI TCGA 3 cut(s) 149, 170, 425
TatI WGTACW 4 cut(s) 747, 1088, 1959, 2483
TauI GCSGC 3 cut(s) 880, 1151, 1826
TfiI GAWTC 7 cut(s) 370, 679, 1123, 1195, 1235, 1334, 2241
Tru1I TTAA 4 cut(s) 327, 1284, 1496, 2130
Tru9I TTAA 4 cut(s) 327, 1284, 1496, 2130
TscAI CASTG 3 cut(s) 834, 1039, 1360
TseFI GTSAC 1 cut(s) 1543
TseI GCWGC 4 cut(s) 5, 36, 706, 1875
Tsp45I GTSAC 1 cut(s) 1543
TspGWI ACGGA 1 cut(s) 640
TspRI CASTG 3 cut(s) 834, 1039, 1360
VpaK11BI GGWCC 1 cut(s) 1116
XapI RAATTY 9 cut(s) 151, 302, 1004, 1159, 1302, 1631, 1735, 2082, 2173
XbaI TCTAGA 3 cut(s) 898, 1427, 1483
XceI RCATGY 5 cut(s) 383, 713, 1069, 1516, 1875
XcmI CCANNNNNNNNNTGG 1 cut(s) 427
XspI CTAG 7 cut(s) 363, 899, 1316, 1428, 1484, 1554, 2451
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.