Rh7AG137600

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0014735
Physical Location & Seq
Forward (+)
10993308 .. 10997497
4190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG137600.1

Sequence Viewer

Length: 2511 bp
ATGGCTGCTGTGAGAGTGAGACCACAAGGCTCGTGTTCGCTAAGACCATCGGAGCCATTACACTGCTACAAGTTGAGAGGTGGTGCTACAACAGTTTCTTTTGCTTCAAAGTTTCAGTCTTTATGTTGCAAATCACAGTTCCTGGGGAACCCATCTCGGAAATCGAATTCCGGAGGTGGGTTTTGGAGGAATTGTTCCCGGATTGATGTTGTTTCGGCCGGTGAGCTGATCAAGAGGTACGTTGAGAATGGGAATTGCGAGGATGCGAAAGCGGTTTATGTTAAAATGCTTGAACTTGGTTTGCCTGTAGCTGAGGAATTTCAGTTCTTTCCGATTTTGATTAAGGCCTTTGGGGGGCTTTGTGATGTGGGCAAGGCTAGGGAGATTCATGGGCACGTGTTGAAATTGGGGGTTTTGGGCGATGTTTACGATGCCAATTCGATTTTGGGGGTTTATTGGAAATGTGGGGAGGTTGAGGATGCGGTTCAGATGTTTGAGAAAATGCCTGAGAGGGATTTGGTGTCTTGGAATACGATGATATCTGGGTTTTGCCATTCAGGGGATTATGTGAGCTCGTTGGGGATGTTTAGTCGGATGGTTCGGGATCATTGGGTGTTGCCTAATCGGGTGGCTTGCCTTTCCGCTCTCACTTCCTGCTCTTCGGTTCAGTCTTTGATTCATGGCAGAGAGATTCATGGCTTTGCCGTGAAGCGTTGGCTGGATGGTGATCAGTTTATGGTTAGTGGGTTGATTGATATGTACATGAAATGTGGGGATGTGAAGAATGCGGAATGTGTTTATAGGAGCGTTATTGGTGAAGCGTGTATTAGAGAAAATACCGTGATATGGAATGTGATGATTTCGGGCTATGTCTCTAATGGGTGTTGGCCGCAGGCGGTGGAGTTGTTTCTAGAGATGTTGGCGATTGGGTTGTTACCCGATACTTCCACAATGGTGGCCATTACAGGTTTGTGCTCTCACCTAATGGATTTAGCATTCGGAAAGCAGATCCATAAATTCTGTTTGAGCACTCAATTGAACACTGATGTACGAGTTGAAACAGCTCTTATGGACATGTATTTCAAATGTGGTGATAGTACAACTGGTCTTGAAATCTTCAGAAGGTCCCTGAATCGTAACATGGTCATGTGGGGCGCCGCCATCTCAAATTTTGCTCAAAGTAGTCATCCTCGTGAGGCGTTGAATCTGTTTCATGATTATATTTTAGAATATGGCTTTGTGGATTCTGTCATAATCTTGGCTGTTCTGCGGGCTTGTTCATCCCTGGCTGTTAAGTCTATAGGGATGGAAATTCATGGGCTACTAGTGAAATTGGGGTTTGATTCAGACCATTTTGTTGCCAGTGCATTAGTTGATTTTTATTCAAAAACCAGAGATATTGAGTCTGCTCAAAAAGTATTTCACAGACTACCAGCTAGAGATTTGGTGTCATGGAATGCCTTGATATCCGGATATACTCAGAATGAGTATCTAGATGAAGCTTTAAAGGCATTCCTTGACATGCAACTTGAAGAAATTAGACCTAATACTGTGACAGTGGCTAGTATTCTGTCAGTTTGTGCTCAGTTGTCAATCATGATGTTGTGTAAGGAGGTTCATGGTTACCTATTACGGCAAGAATTTGAGTCCAATGTTCTTGTGAGCAATTCCCTGATGACTACCTATGCAAAATGTGGAGACATAAAAAGCTCAAGGAGTGTGTTTGTGAAAATGCCTGAAAGAAATTTAGTTTCATGGAACTCAATTCTTCTGGGGTTAGGAGTGCATGGCCATGCAGATGAAACATTTGCTTTATTTGAAAAAATGGAAGCGGCAGGATTGGAGCCTGATCATGCAACTTTTACAGCTCTTCTTTCTGCTTGCAGCCATGCAGGGAGGATAGAAGAGGGGCTGAAGTATTTTCAGCGAATGGTAGAAGTTTACAAAATTGAGCCTCAACTTGAACAGTACACCTGCATGGTTGATCTTTTAGGCCGAGCTGGCCATCTAAAGCAAGCATATGATATTATTTCAACAATGCCTTGTGCCTCCGATGATCGTATATGGGGATCATTGCTTGGATCATGCAAAATTCATGGTGATGAAAGATTGGCAGAAGTTGTGGCTGATCATATCTTTAAACTGGATCCTACTAATATTGGCTACCGTACACTTCTTGCAAATTTGTACGAAGATTATGGGAAATGGAATGAAGTTACCAGGGTTAGATCAGACATCAAAGGTGTGAGACTCAAGAAGACACCTGGGTGTAGTTGGATTGAAGTTGATAACAATCTCCATACCTTTACTGCGGGTGATCATTCTCATAATGAGTCAGAGGAGATATATTTTACAATAGAAAATCTGACAACTGAAATTAGGAAGGCAGGATATATCCCTCAATTACTGACTGTGGGTGAGGGGCTTGATGAGGTTCTTGATGAAGATCTTACGTCATCTAGAGACAAGGGTTTGTTGTTTCTGGTTGCAAGTACAAACAATCACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

836

Amino Acids

93.27

Weight (kDa)

5.78

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 174 - 202 8.9e-07 PPR repeat
PPR_2 PF13041 279 - 325 5.9e-08 PPR repeat family
PPR PF01535 281 - 310 2.7e-07 PPR repeat
PPR_2 PF13041 481 - 528 1.2e-09 PPR repeat family
PPR PF01535 483 - 510 4.2e-06 PPR repeat
PPR_2 PF13041 582 - 629 2.7e-10 PPR repeat family
PPR_long PF17177 599 - 680 6.6e-07 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 699 - 761 2.2e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014735)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05260
malus_domestica MD06G1174400.v1.1 MD06G1174600.v1.1
prunus_persica Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1 Prupe.5G174400_v2.0.a1
pyrus_communis pycom06g15570
rosa_chinensis RchiOBHm_Chr7g0193611
rosa_laevigata RLG00000004256
rosa_multiflora Rmu_sc0042944.1_g000002
rosa_roxburghii Rroxscaffold_3G00261960
rosa_rugosa Rorug07G0011000 Rorug07G0011100
rosa_samantha Rh7AG137600 Rh7BG137800 Rh7CG141400
rosa_wichuraiana Rw7G011720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1982
Acc36I ACCTGC 1 cut(s) 1982
AccB1I GGYRCC 1 cut(s) 1154
AccBSI CCGCTC 1 cut(s) 644
AccIII TCCGGA 2 cut(s) 170, 1469
AclWI GGATC 6 cut(s) 612, 1003, 2077, 2089, 2141, 2154
AcoI YGGCCR 5 cut(s) 216, 887, 957, 1789, 2002
AcsI RAATTY 9 cut(s) 166, 317, 1016, 1168, 1311, 1640, 1744, 2091, 2182
AcuI CTGAAG 2 cut(s) 1102, 1934
AcvI CACGTG 1 cut(s) 397
AcyI GRCGYC 1 cut(s) 1155
AfaI GTAC 8 cut(s) 239, 761, 1050, 1099, 1970, 2170, 2189, 2494
AfiI CCNNNNNNNGG 4 cut(s) 177, 354, 559, 846
AflIII ACRYGT 2 cut(s) 396, 1074
AhlI ACTAGT 1 cut(s) 1324
AjnI CCWGG 4 cut(s) 141, 1284, 2219, 2263
AleI CACNNNNGTG 2 cut(s) 953, 2266
AloI GAACNNNNNNTCC 4 cut(s) 178, 210, 308, 340
AluBI AGCT 9 cut(s) 226, 311, 573, 1064, 1436, 1502, 1710, 1868, 2000
AluI AGCT 9 cut(s) 226, 311, 573, 1064, 1436, 1502, 1710, 1868, 2000
Alw21I GWGCWC 4 cut(s) 575, 977, 1031, 1585
Alw26I GTCTC 5 cut(s) 13, 877, 1692, 2242, 2457
AlwI GGATC 6 cut(s) 612, 1003, 2077, 2089, 2141, 2154
AlwNI CAGNNNCTG 1 cut(s) 142
Aor13HI TCCGGA 2 cut(s) 170, 1469
AoxI GGCC 7 cut(s) 216, 345, 887, 957, 1789, 1993, 2002
ApeKI GCWGC 2 cut(s) 5, 1884
ApoI RAATTY 9 cut(s) 166, 317, 1016, 1168, 1311, 1640, 1744, 2091, 2182
ArsI GACNNNNNNTTYG 2 cut(s) 101, 133
AspLEI GCGC 1 cut(s) 1157
AspS9I GGNCC 1 cut(s) 1125
AsuC2I CCSGG 1 cut(s) 199
AsuHPI GGTGA 9 cut(s) 233, 737, 827, 971, 1103, 2111, 2327, 2429, 2495
AvaII GGWCC 1 cut(s) 1125
BaeGI GKGCMC 1 cut(s) 396
BalI TGGCCA 3 cut(s) 959, 1791, 2004
BamHI GGATCC 1 cut(s) 2146
BanI GGYRCC 1 cut(s) 1154
BanII GRGCYC 1 cut(s) 575
BauI CACGAG 2 cut(s) 31, 1191
BbrPI CACGTG 1 cut(s) 397
BbsI GAAGAC 1 cut(s) 2264
Bbv12I GWGCWC 4 cut(s) 575, 977, 1031, 1585
BbvCI CCTCAGC 1 cut(s) 312
BbvI GCAGC 1 cut(s) 1896
BccI CCATC 7 cut(s) 55, 160, 589, 716, 1169, 1300, 2013
BceAI ACGGC 2 cut(s) 689, 1649
BciT130I CCWGG 4 cut(s) 143, 1286, 2221, 2265
BclI TGATCA 5 cut(s) 228, 727, 1849, 2128, 2317
BcnI CCSGG 1 cut(s) 199
BcoDI GTCTC 5 cut(s) 13, 877, 1692, 2242, 2457
BcuI ACTAGT 1 cut(s) 1324
BfaI CTAG 7 cut(s) 378, 911, 1325, 1437, 1493, 1563, 2460
BfmI CTRYAG 2 cut(s) 306, 1299
BfoI RGCGCY 1 cut(s) 1158
BfuAI ACCTGC 1 cut(s) 1982
BglI GCCNNNNNGGC 1 cut(s) 2001
BglII AGATCT 1 cut(s) 2446
BisI GCNGC 5 cut(s) 6, 890, 1158, 1833, 1885
BlsI GCNGC 5 cut(s) 7, 891, 1159, 1834, 1886
Bme1390I CCNGG 5 cut(s) 143, 199, 1286, 2221, 2265
Bme18I GGWCC 1 cut(s) 1125
BmgT120I GGNCC 1 cut(s) 1125
BmiI GGNNCC 6 cut(s) 54, 149, 1127, 1156, 1845, 2148
BmrFI CCNGG 5 cut(s) 143, 199, 1286, 2221, 2265
BmsI GCATC 3 cut(s) 253, 421, 469
BpiI GAAGAC 1 cut(s) 2264
Bpu10I CCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 1696, 2237
BpuMI CCSGG 1 cut(s) 199
BsaAI YACGTR 1 cut(s) 397
BsaBI GATNNNNATC 3 cut(s) 726, 2292, 2445
BsaHI GRCGYC 1 cut(s) 1155
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 142, 1284, 2220, 2264
BsaWI WCCGGW 2 cut(s) 170, 1469
BsaXI ACNNNNNCTCC 2 cut(s) 178, 208
Bsc4I CCNNNNNNNGG 4 cut(s) 177, 354, 559, 846
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 1108, 1362, 2148
Bse3DI GCAATG 1 cut(s) 2072
Bse8I GATNNNNATC 3 cut(s) 726, 2292, 2445
BseAI TCCGGA 2 cut(s) 170, 1469
BseBI CCWGG 4 cut(s) 143, 1286, 2221, 2265
BseDI CCNNGG 4 cut(s) 142, 1284, 2220, 2264
BseGI GGATG 9 cut(s) 268, 484, 588, 600, 727, 781, 1186, 1280, 1311
BseJI GATNNNNATC 3 cut(s) 726, 2292, 2445
BseLI CCNNNNNNNGG 4 cut(s) 177, 354, 559, 846
BseMI GCAATG 1 cut(s) 2072
BseMII CTCAG 4 cut(s) 303, 498, 1493, 1598
BseNI ACTGG 3 cut(s) 1108, 1362, 2148
BseRI GAGGAG 1 cut(s) 2354
BseSI GKGCMC 1 cut(s) 396
BseX3I CGGCCG 1 cut(s) 216
BseXI GCAGC 1 cut(s) 1896
Bsh1285I CGRYCG 1 cut(s) 219
BshFI GGCC 7 cut(s) 218, 347, 889, 959, 1791, 1995, 2004
BshNI GGYRCC 1 cut(s) 1154
BsiEI CGRYCG 1 cut(s) 219
BsiHKAI GWGCWC 4 cut(s) 575, 977, 1031, 1585
BsiSI CCGG 4 cut(s) 171, 199, 219, 1470
BslFI GGGAC 1 cut(s) 1111
BslI CCNNNNNNNGG 4 cut(s) 177, 354, 559, 846
BsmAI GTCTC 5 cut(s) 13, 877, 1692, 2242, 2457
BsmFI GGGAC 1 cut(s) 1111
BsmI GAATGC 4 cut(s) 790, 995, 1462, 1511
BsnI GGCC 7 cut(s) 218, 347, 889, 959, 1791, 1995, 2004
Bso31I GGTCTC 1 cut(s) 13
Bsp1286I GDGCHC 5 cut(s) 396, 575, 977, 1031, 1585
Bsp13I TCCGGA 2 cut(s) 170, 1469
Bsp1407I TGTACA 1 cut(s) 759
BspANI GGCC 7 cut(s) 218, 347, 889, 959, 1791, 1995, 2004
BspCNI CTCAG 4 cut(s) 304, 499, 1492, 1597
BspEI TCCGGA 2 cut(s) 170, 1469
BspHI TCATGA 2 cut(s) 1213, 1596
BspLI GGNNCC 6 cut(s) 54, 149, 1127, 1156, 1845, 2148
BspMI ACCTGC 1 cut(s) 1982
BspPI GGATC 6 cut(s) 612, 1003, 2077, 2089, 2141, 2154
BspQI GCTCTTC 2 cut(s) 664, 1875
BspT107I GGYRCC 1 cut(s) 1154
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 644
BsrDI GCAATG 1 cut(s) 2072
BsrFI RCCGGY 1 cut(s) 218
BsrGI TGTACA 1 cut(s) 759
BsrI ACTGG 3 cut(s) 1108, 1362, 2148
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 4 cut(s) 142, 1284, 2220, 2264
BssNI GRCGYC 1 cut(s) 1155
BssSI CACGAG 2 cut(s) 31, 1191
Bst2BI CACGAG 2 cut(s) 31, 1191
Bst2UI CCWGG 4 cut(s) 143, 1286, 2221, 2265
Bst4CI ACNGT 8 cut(s) 94, 138, 841, 1552, 1558, 1968, 2168, 2413
Bst6I CTCTTC 3 cut(s) 664, 1875, 1899
BstACI GRCGYC 1 cut(s) 1155
BstAUI TGTACA 1 cut(s) 759
BstBAI YACGTR 1 cut(s) 397
BstC8I GCNNGC 6 cut(s) 634, 894, 1272, 1882, 2002, 2016
BstDEI CTNAG 5 cut(s) 41, 312, 507, 1479, 1584
BstEII GGTNACC 1 cut(s) 1622
BstF5I GGATG 9 cut(s) 268, 484, 588, 600, 727, 781, 1186, 1280, 1311
BstH2I RGCGCY 1 cut(s) 1158
BstHHI GCGC 1 cut(s) 1157
BstMAI GTCTC 5 cut(s) 13, 877, 1692, 2242, 2457
BstMCI CGRYCG 1 cut(s) 219
BstMWI GCNNNNNNNGC 2 cut(s) 1508, 2001
BstNI CCWGG 4 cut(s) 143, 1286, 2221, 2265
BstNSI RCATGY 2 cut(s) 1078, 1525
BstPI GGTNACC 1 cut(s) 1622
BstSCI CCNGG 5 cut(s) 141, 197, 1284, 2219, 2263
BstSFI CTRYAG 2 cut(s) 306, 1299
BstSLI GKGCMC 1 cut(s) 396
BstV1I GCAGC 1 cut(s) 1896
BstV2I GAAGAC 1 cut(s) 2264
BstX2I RGATCY 3 cut(s) 1008, 2146, 2446
BstXI CCANNNNNNTGG 1 cut(s) 955
BstYI RGATCY 3 cut(s) 1008, 2146, 2446
BstZI CGGCCG 1 cut(s) 216
BsuRI GGCC 7 cut(s) 218, 347, 889, 959, 1791, 1995, 2004
BtgZI GCGATG 1 cut(s) 435
BtsCI GGATG 9 cut(s) 268, 484, 588, 600, 727, 781, 1186, 1280, 1311
BtsI GCAGTG 1 cut(s) 61
BtsIMutI CAGTG 4 cut(s) 61, 1041, 1369, 1563
BveI ACCTGC 1 cut(s) 1982
Cac8I GCNNGC 6 cut(s) 634, 894, 1272, 1882, 2002, 2016
CaiI CAGNNNCTG 1 cut(s) 142
CciI TCATGA 2 cut(s) 1213, 1596
CfoI GCGC 1 cut(s) 1157
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 1125
Csp6I GTAC 8 cut(s) 238, 760, 1049, 1098, 1969, 2169, 2188, 2493
CviQI GTAC 8 cut(s) 238, 760, 1049, 1098, 1969, 2169, 2188, 2493
DdeI CTNAG 5 cut(s) 41, 312, 507, 1479, 1584
DinI GGCGCC 1 cut(s) 1156
DraI TTTAAA 2 cut(s) 1506, 2140
EaeI YGGCCR 5 cut(s) 216, 887, 957, 1789, 2002
EagI CGGCCG 1 cut(s) 216
Eam1104I CTCTTC 3 cut(s) 664, 1875, 1899
EarI CTCTTC 3 cut(s) 664, 1875, 1899
Ecl136II GAGCTC 1 cut(s) 573
EclXI CGGCCG 1 cut(s) 216
Eco147I AGGCCT 1 cut(s) 347
Eco24I GRGCYC 1 cut(s) 575
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 540, 1467
Eco47I GGWCC 1 cut(s) 1125
Eco52I CGGCCG 1 cut(s) 216
Eco53kI GAGCTC 1 cut(s) 573
Eco57I CTGAAG 2 cut(s) 1102, 1934
Eco72I CACGTG 1 cut(s) 397
Eco91I GGTNACC 1 cut(s) 1622
EcoICRI GAGCTC 1 cut(s) 573
EcoO109I RGGNCCY 1 cut(s) 1125
EcoO65I GGTNACC 1 cut(s) 1622
EcoRI GAATTC 1 cut(s) 166
EcoRII CCWGG 4 cut(s) 141, 1284, 2219, 2263
EcoRV GATATC 2 cut(s) 540, 1467
EcoT38I GRGCYC 1 cut(s) 575
EgeI GGCGCC 1 cut(s) 1156
EheI GGCGCC 1 cut(s) 1156
FaqI GGGAC 1 cut(s) 1111
FauI CCCGC 2 cut(s) 1263, 2305
FauNDI CATATG 1 cut(s) 2020
FbaI TGATCA 5 cut(s) 228, 727, 1849, 2128, 2317
Fnu4HI GCNGC 5 cut(s) 6, 890, 1158, 1833, 1885
FokI GGATG 9 cut(s) 275, 491, 595, 607, 734, 788, 1173, 1267, 1318
FriOI GRGCYC 1 cut(s) 575
Fsp4HI GCNGC 5 cut(s) 6, 890, 1158, 1833, 1885
FspBI CTAG 7 cut(s) 378, 911, 1325, 1437, 1493, 1563, 2460
GlaI GCGC 1 cut(s) 1156
GluI GCNGC 5 cut(s) 6, 890, 1158, 1833, 1885
HaeII RGCGCY 1 cut(s) 1158
HaeIII GGCC 7 cut(s) 218, 347, 889, 959, 1791, 1995, 2004
HapII CCGG 4 cut(s) 171, 199, 219, 1470
HhaI GCGC 1 cut(s) 1157
Hin1I GRCGYC 1 cut(s) 1155
Hin6I GCGC 1 cut(s) 1155
HinP1I GCGC 1 cut(s) 1155
HindIII AAGCTT 1 cut(s) 1500
HpaII CCGG 4 cut(s) 171, 199, 219, 1470
HphI GGTGA 9 cut(s) 233, 737, 827, 971, 1103, 2111, 2327, 2429, 2495
Hpy166II GTNNAC 4 cut(s) 427, 1942, 1971, 2171
Hpy8I GTNNAC 4 cut(s) 427, 1942, 1971, 2171
HpyAV CCTTC 2 cut(s) 1116, 2377
HpyCH4III ACNGT 8 cut(s) 94, 138, 841, 1552, 1558, 1968, 2168, 2413
HpyCH4IV ACGT 3 cut(s) 240, 396, 2453
HpyF10VI GCNNNNNNNGC 2 cut(s) 1508, 2001
HpyF3I CTNAG 5 cut(s) 41, 312, 507, 1479, 1584
HpySE526I ACGT 3 cut(s) 240, 396, 2453
Hsp92I GRCGYC 1 cut(s) 1155
HspAI GCGC 1 cut(s) 1155
KasI GGCGCC 1 cut(s) 1154
Kpn2I TCCGGA 2 cut(s) 170, 1469
Ksp22I TGATCA 5 cut(s) 228, 727, 1849, 2128, 2317
LguI GCTCTTC 2 cut(s) 664, 1875
LmnI GCTCC 3 cut(s) 52, 804, 1843
Lsp1109I GCAGC 1 cut(s) 1896
LweI GCATC 3 cut(s) 253, 421, 469
MaeI CTAG 7 cut(s) 378, 911, 1325, 1437, 1493, 1563, 2460
MaeII ACGT 3 cut(s) 240, 396, 2453
MaeIII GTNAC 5 cut(s) 933, 1136, 1552, 1622, 2215
MbiI CCGCTC 1 cut(s) 644
MfeI CAATTG 1 cut(s) 1034
MflI RGATCY 3 cut(s) 1008, 2146, 2446
MhlI GDGCHC 5 cut(s) 396, 575, 977, 1031, 1585
MlsI TGGCCA 3 cut(s) 959, 1791, 2004
MluNI TGGCCA 3 cut(s) 959, 1791, 2004
Mly113I GGCGCC 1 cut(s) 1155
MlyI GAGTC 4 cut(s) 1412, 1655, 2244, 2342
MmeI TCCRAC 2 cut(s) 572, 2255
Mox20I TGGCCA 3 cut(s) 959, 1791, 2004
MroI TCCGGA 2 cut(s) 170, 1469
MscI TGGCCA 3 cut(s) 959, 1791, 2004
MseI TTAA 5 cut(s) 282, 342, 1293, 1505, 2139
MslI CAYNNNNRTG 8 cut(s) 953, 1145, 1191, 1791, 1797, 1976, 2100, 2266
Msp20I TGGCCA 3 cut(s) 959, 1791, 2004
MspI CCGG 4 cut(s) 171, 199, 219, 1470
MspR9I CCNGG 5 cut(s) 143, 199, 1286, 2221, 2265
MunI CAATTG 1 cut(s) 1034
Mva1269I GAATGC 4 cut(s) 790, 995, 1462, 1511
MvaI CCWGG 4 cut(s) 143, 1286, 2221, 2265
MwoI GCNNNNNNNGC 2 cut(s) 1508, 2001
NarI GGCGCC 1 cut(s) 1155
NciI CCSGG 1 cut(s) 199
NdeI CATATG 1 cut(s) 2020
NlaIV GGNNCC 6 cut(s) 54, 149, 1127, 1156, 1845, 2148
NmeAIII GCCGAG 1 cut(s) 2021
NmuCI GTSAC 1 cut(s) 1552
NspI RCATGY 2 cut(s) 1078, 1525
OliI CACNNNNGTG 2 cut(s) 953, 2266
PagI TCATGA 2 cut(s) 1213, 1596
PaqCI CACCTGC 1 cut(s) 1982
PceI AGGCCT 1 cut(s) 347
PciI ACATGT 1 cut(s) 1074
PciSI GCTCTTC 2 cut(s) 664, 1875
PctI GAATGC 4 cut(s) 790, 995, 1462, 1511
PfeI GAWTC 7 cut(s) 385, 676, 691, 1132, 1204, 1244, 1343
PfoI TCCNGGA 1 cut(s) 197
PkrI GCNGC 5 cut(s) 7, 891, 1159, 1834, 1886
PleI GAGTC 4 cut(s) 1411, 1654, 2244, 2341
PluTI GGCGCC 1 cut(s) 1158
PmaCI CACGTG 1 cut(s) 397
PmlI CACGTG 1 cut(s) 397
PpsI GAGTC 4 cut(s) 1411, 1654, 2244, 2341
Ppu21I YACGTR 1 cut(s) 397
PpuMI RGGWCCY 1 cut(s) 1125
PscI ACATGT 1 cut(s) 1074
Psp124BI GAGCTC 1 cut(s) 575
Psp5II RGGWCCY 1 cut(s) 1125
Psp6I CCWGG 4 cut(s) 141, 1284, 2219, 2263
PspCI CACGTG 1 cut(s) 397
PspEI GGTNACC 1 cut(s) 1622
PspGI CCWGG 4 cut(s) 141, 1284, 2219, 2263
PspN4I GGNNCC 6 cut(s) 54, 149, 1127, 1156, 1845, 2148
PspPI GGNCC 1 cut(s) 1125
PspPPI RGGWCCY 1 cut(s) 1125
PstNI CAGNNNCTG 1 cut(s) 142
PsuI RGATCY 3 cut(s) 1008, 2146, 2446
RsaI GTAC 8 cut(s) 239, 761, 1050, 1099, 1970, 2170, 2189, 2494
RsaNI GTAC 8 cut(s) 238, 760, 1049, 1098, 1969, 2169, 2188, 2493
RseI CAYNNNNRTG 8 cut(s) 953, 1145, 1191, 1791, 1797, 1976, 2100, 2266
SacI GAGCTC 1 cut(s) 575
SapI GCTCTTC 2 cut(s) 664, 1875
SaqAI TTAA 5 cut(s) 282, 342, 1293, 1505, 2139
SatI GCNGC 5 cut(s) 6, 890, 1158, 1833, 1885
Sau96I GGNCC 1 cut(s) 1125
SchI GAGTC 4 cut(s) 1412, 1655, 2244, 2342
ScrFI CCNGG 5 cut(s) 143, 199, 1286, 2221, 2265
SduI GDGCHC 5 cut(s) 396, 575, 977, 1031, 1585
SfaNI GCATC 3 cut(s) 253, 421, 469
SfcI CTRYAG 2 cut(s) 306, 1299
SfiI GGCCNNNNNGGCC 1 cut(s) 2001
SfoI GGCGCC 1 cut(s) 1156
SinI GGWCC 1 cut(s) 1125
SmiMI CAYNNNNRTG 8 cut(s) 953, 1145, 1191, 1791, 1797, 1976, 2100, 2266
SmlI CTYRAG 2 cut(s) 1711, 2252
SmoI CTYRAG 2 cut(s) 1711, 2252
SpeI ACTAGT 1 cut(s) 1324
SseBI AGGCCT 1 cut(s) 347
SspDI GGCGCC 1 cut(s) 1154
SspI AATATT 1 cut(s) 2158
SspMI CTAG 7 cut(s) 378, 911, 1325, 1437, 1493, 1563, 2460
SstI GAGCTC 1 cut(s) 575
StuI AGGCCT 1 cut(s) 347
StyD4I CCNGG 5 cut(s) 141, 197, 1284, 2219, 2263
TaaI ACNGT 8 cut(s) 94, 138, 841, 1552, 1558, 1968, 2168, 2413
TaiI ACGT 3 cut(s) 243, 399, 2456
TaqI TCGA 2 cut(s) 164, 440
TatI WGTACW 4 cut(s) 759, 1097, 1968, 2492
TauI GCSGC 3 cut(s) 892, 1160, 1835
TfiI GAWTC 7 cut(s) 385, 676, 691, 1132, 1204, 1244, 1343
Tru1I TTAA 5 cut(s) 282, 342, 1293, 1505, 2139
Tru9I TTAA 5 cut(s) 282, 342, 1293, 1505, 2139
TscAI CASTG 4 cut(s) 68, 1048, 1369, 1563
TseFI GTSAC 1 cut(s) 1552
TseI GCWGC 2 cut(s) 5, 1884
Tsp45I GTSAC 1 cut(s) 1552
TspRI CASTG 4 cut(s) 68, 1048, 1369, 1563
VpaK11BI GGWCC 1 cut(s) 1125
XapI RAATTY 9 cut(s) 166, 317, 1016, 1168, 1311, 1640, 1744, 2091, 2182
XbaI TCTAGA 3 cut(s) 910, 1492, 2459
XceI RCATGY 2 cut(s) 1078, 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 442
XspI CTAG 7 cut(s) 378, 911, 1325, 1437, 1493, 1563, 2460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.