Rorug07G0029400

FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
2048183 .. 2049278
1096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0029400.1

Sequence Viewer

Length: 1029 bp
ATGGAGTTTGCCTCTGGCATTGCTGAGACAGTCTTGGTTAGGCTAGCCTCCTATGCTGCCCAAGAAGTTTGCTTGGCTTGGGGTGCCCAACTTGAGCTCAAGAAGCTCAATAAGACCTTGTTAGCCATCAAACTTGTACTCCAGGATGCAGAGAGGAAGCAAATGCAGAACCCCCTCATCACTCATTGGCTAGGAAACCTCAAAGATGTTTGCAACGATGCTGAGGATGTACTCGACGAATTTGAGTTCCGAAAGCTCCGACTCGAAGTGCTCACCAACGACCACCGGAGTGTCAAAGCAAAGGTACACCAATTCTTCTCCCGTTGGAATCCAGTCGTGTTTAACTTCAAAATGGGTCATAAAATCAAAGAGATTAGAGAAAGACTAGATGAGATTGATGCTGAAAAGACAAAGTTTTCTCTCATTCAAGTTGCTGAAGTAGTTGATGATTGTGGTGCGCCTCAAAGGGCGCATGATAATAAAAGGGAGACAGACTCTTTACTGGTAGGTCATGTTGTTGGAAGAGATGGTGATAAGGAAAAAATTATCCTTCTCTTTGATGACACCAGTTCCTCCAGTGTCGATAATATTTCAGTCATTTCCATCTTCGGGTTAGGAGGGTTGGGAAAAACTACACTTGCTAAATCGGTGTATAATGATGCTAGGGTAGAGAACACATTTGATATGAGAATGTGGGTATGTGTCTCAGAGAACTTTGATATCCATACATTAGTTCGTGGCATTATTGCTGCAACTAAACAAGAATGTGCCGGTGAAAGTTTGGATCTTATGAAAAGGGGGTTGCAAGATATTTTGAGAGATAAAAAGTTTTTGTTAGTGTTGGACGATGTATGGGATAAAGGGCCAACAGGAGTTACACATCAAAAATGGAGTGAGTTAAAAATTGTGTTAGATGTTGGAGCCAAAGGGAGTAAAATCATCGTAACAACACGCAATGAATCAGTAGCTTCATTTGTGCACCCTATACACATGCATCATTTAAAAGTCTTTCTCATGAGGATTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

342

Amino Acids

38.7

Weight (kDa)

6.65

Isoelectric Point (pI)

27.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 95 3.7e-21 Rx N-terminal domain
NB-ARC PF00931 195 - 331 3.3e-32 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011500)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 83
AclWI GGATC 1 cut(s) 792
AcsI RAATTY 1 cut(s) 239
AcuI CTGAAG 1 cut(s) 456
AfaI GTAC 3 cut(s) 138, 231, 306
AfiI CCNNNNNNNGG 1 cut(s) 609
AgsI TTSAA 2 cut(s) 349, 428
AjnI CCWGG 1 cut(s) 141
AleI CACNNNNGTG 1 cut(s) 288
AluBI AGCT 4 cut(s) 97, 106, 256, 968
AluI AGCT 4 cut(s) 97, 106, 256, 968
Alw21I GWGCWC 3 cut(s) 99, 273, 981
Alw26I GTCTC 3 cut(s) 20, 482, 709
Alw44I GTGCAC 1 cut(s) 977
AlwI GGATC 1 cut(s) 792
AoxI GGCC 1 cut(s) 863
ApaLI GTGCAC 1 cut(s) 977
ApeKI GCWGC 2 cut(s) 56, 749
ApoI RAATTY 1 cut(s) 239
AspLEI GCGC 2 cut(s) 460, 472
AspS9I GGNCC 1 cut(s) 863
AsuHPI GGTGA 3 cut(s) 265, 542, 785
AsuNHI GCTAGC 1 cut(s) 43
BaeGI GKGCMC 2 cut(s) 88, 981
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 99
Bbv12I GWGCWC 3 cut(s) 99, 273, 981
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 2 cut(s) 43, 736
BccI CCATC 3 cut(s) 134, 521, 611
BciT130I CCWGG 1 cut(s) 143
BcoDI GTCTC 3 cut(s) 20, 482, 709
BfaI CTAG 4 cut(s) 44, 191, 386, 663
BisI GCNGC 2 cut(s) 57, 750
BlsI GCNGC 2 cut(s) 58, 751
Bme1390I CCNGG 1 cut(s) 143
BmgT120I GGNCC 1 cut(s) 863
BmiI GGNNCC 2 cut(s) 85, 922
BmrFI CCNGG 1 cut(s) 143
BmsI GCATC 5 cut(s) 136, 208, 388, 649, 1003
BmtI GCTAGC 1 cut(s) 47
BplI GAGNNNNNCTC 3 cut(s) 28, 479, 511
BpmI CTGGAG 2 cut(s) 125, 559
Bpu10I CCTNAGC 1 cut(s) 222
BpuEI CTTGAG 2 cut(s) 83, 113
BsaWI WCCGGW 1 cut(s) 285
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 1 cut(s) 609
Bse118I RCCGGY 1 cut(s) 770
Bse1I ACTGG 4 cut(s) 332, 507, 567, 576
Bse3DI GCAATG 2 cut(s) 18, 961
BseBI CCWGG 1 cut(s) 143
BseGI GGATG 2 cut(s) 151, 232
BseLI CCNNNNNNNGG 1 cut(s) 609
BseMI GCAATG 2 cut(s) 18, 961
BseMII CTCAG 3 cut(s) 15, 213, 720
BseNI ACTGG 4 cut(s) 332, 507, 567, 576
BseSI GKGCMC 2 cut(s) 88, 981
BseXI GCAGC 2 cut(s) 43, 736
BshFI GGCC 1 cut(s) 865
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 3 cut(s) 99, 273, 981
BsiSI CCGG 2 cut(s) 286, 771
BslI CCNNNNNNNGG 1 cut(s) 609
BsmAI GTCTC 3 cut(s) 20, 482, 709
BsnI GGCC 1 cut(s) 865
Bsp1286I GDGCHC 4 cut(s) 88, 99, 273, 981
Bsp143I GATC 1 cut(s) 784
BspANI GGCC 1 cut(s) 865
BspCNI CTCAG 3 cut(s) 16, 214, 719
BspHI TCATGA 1 cut(s) 1014
BspLI GGNNCC 2 cut(s) 85, 922
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 792
BspT107I GGYRCC 1 cut(s) 83
BsrDI GCAATG 2 cut(s) 18, 961
BsrFI RCCGGY 1 cut(s) 770
BsrI ACTGG 4 cut(s) 332, 507, 567, 576
BssAI RCCGGY 1 cut(s) 770
BssMI GATC 1 cut(s) 784
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 517
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 3 cut(s) 24, 222, 706
BstF5I GGATG 2 cut(s) 151, 232
BstHHI GCGC 2 cut(s) 460, 472
BstKTI GATC 1 cut(s) 787
BstMAI GTCTC 3 cut(s) 20, 482, 709
BstMBI GATC 1 cut(s) 784
BstMWI GCNNNNNNNGC 3 cut(s) 53, 83, 103
BstNI CCWGG 1 cut(s) 143
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 1 cut(s) 141
BstSLI GKGCMC 2 cut(s) 88, 981
BstV1I GCAGC 2 cut(s) 43, 736
BstX2I RGATCY 1 cut(s) 784
BstYI RGATCY 1 cut(s) 784
BsuRI GGCC 1 cut(s) 865
BtsCI GGATG 2 cut(s) 151, 232
BtsIMutI CAGTG 1 cut(s) 583
Cac8I GCNNGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 1014
CfoI GCGC 2 cut(s) 460, 472
Cfr10I RCCGGY 1 cut(s) 770
Cfr13I GGNCC 1 cut(s) 863
Csp6I GTAC 3 cut(s) 137, 230, 305
CviAII CATG 5 cut(s) 473, 512, 991, 1015, 1026
CviQI GTAC 3 cut(s) 137, 230, 305
DdeI CTNAG 3 cut(s) 24, 222, 706
DpnI GATC 1 cut(s) 786
DpnII GATC 1 cut(s) 784
DraI TTTAAA 1 cut(s) 1002
Eam1104I CTCTTC 1 cut(s) 517
EarI CTCTTC 1 cut(s) 517
Ecl136II GAGCTC 1 cut(s) 97
Eco24I GRGCYC 1 cut(s) 99
Eco32I GATATC 1 cut(s) 721
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 456
EcoICRI GAGCTC 1 cut(s) 97
EcoRII CCWGG 1 cut(s) 141
EcoRV GATATC 1 cut(s) 721
EcoT22I ATGCAT 1 cut(s) 996
EcoT38I GRGCYC 1 cut(s) 99
FaeI CATG 5 cut(s) 476, 515, 994, 1018, 1029
FatI CATG 5 cut(s) 472, 511, 990, 1014, 1025
Fnu4HI GCNGC 2 cut(s) 57, 750
FokI GGATG 2 cut(s) 158, 239
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 2 cut(s) 57, 750
FspBI CTAG 4 cut(s) 44, 191, 386, 663
GlaI GCGC 2 cut(s) 459, 471
GluI GCNGC 2 cut(s) 57, 750
GsuI CTGGAG 2 cut(s) 125, 559
HaeIII GGCC 1 cut(s) 865
HapII CCGG 2 cut(s) 286, 771
HhaI GCGC 2 cut(s) 460, 472
Hin1II CATG 5 cut(s) 476, 515, 994, 1018, 1029
Hin6I GCGC 2 cut(s) 458, 470
HinP1I GCGC 2 cut(s) 458, 470
HinfI GANTC 5 cut(s) 261, 328, 494, 959, 1021
HpaII CCGG 2 cut(s) 286, 771
HphI GGTGA 3 cut(s) 265, 542, 785
Hpy166II GTNNAC 2 cut(s) 307, 979
Hpy188I TCNGA 3 cut(s) 251, 260, 709
Hpy188III TCNNGA 2 cut(s) 100, 1015
Hpy8I GTNNAC 2 cut(s) 307, 979
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 1 cut(s) 560
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4V TGCA 7 cut(s) 149, 166, 213, 752, 805, 979, 994
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 83, 103
HpyF3I CTNAG 3 cut(s) 24, 222, 706
Hsp92II CATG 5 cut(s) 476, 515, 994, 1018, 1029
HspAI GCGC 2 cut(s) 458, 470
Kzo9I GATC 1 cut(s) 784
LmnI GCTCC 2 cut(s) 261, 920
LpnPI CCDG 9 cut(s) 128, 155, 299, 345, 488, 580, 589, 784, 855
Lsp1109I GCAGC 2 cut(s) 43, 736
LweI GCATC 5 cut(s) 136, 208, 388, 649, 1003
MaeI CTAG 4 cut(s) 44, 191, 386, 663
MaeIII GTNAC 2 cut(s) 874, 943
MalI GATC 1 cut(s) 786
MboI GATC 1 cut(s) 784
MboII GAAGA 3 cut(s) 307, 534, 598
MflI RGATCY 1 cut(s) 784
MhlI GDGCHC 4 cut(s) 88, 99, 273, 981
MluCI AATT 4 cut(s) 239, 311, 543, 903
MlyI GAGTC 2 cut(s) 255, 488
MmeI TCCRAC 5 cut(s) 283, 305, 499, 822, 898
Mph1103I ATGCAT 1 cut(s) 996
MseI TTAA 3 cut(s) 342, 899, 1001
MslI CAYNNNNRTG 1 cut(s) 288
MspI CCGG 2 cut(s) 286, 771
MspR9I CCNGG 1 cut(s) 143
MvaI CCWGG 1 cut(s) 143
MwoI GCNNNNNNNGC 3 cut(s) 53, 83, 103
NdeII GATC 1 cut(s) 784
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 5 cut(s) 476, 515, 994, 1018, 1029
NlaIV GGNNCC 2 cut(s) 85, 922
NsiI ATGCAT 1 cut(s) 996
NspI RCATGY 1 cut(s) 994
OliI CACNNNNGTG 1 cut(s) 288
PagI TCATGA 1 cut(s) 1014
PfeI GAWTC 3 cut(s) 328, 959, 1021
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 2 cut(s) 58, 751
PleI GAGTC 2 cut(s) 255, 488
PpsI GAGTC 2 cut(s) 255, 488
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 141
PspGI CCWGG 1 cut(s) 141
PspN4I GGNNCC 2 cut(s) 85, 922
PspPI GGNCC 1 cut(s) 863
PsuI RGATCY 1 cut(s) 784
RsaI GTAC 3 cut(s) 138, 231, 306
RsaNI GTAC 3 cut(s) 137, 230, 305
RseI CAYNNNNRTG 1 cut(s) 288
SacI GAGCTC 1 cut(s) 99
SaqAI TTAA 3 cut(s) 342, 899, 1001
SatI GCNGC 2 cut(s) 57, 750
Sau3AI GATC 1 cut(s) 784
Sau96I GGNCC 1 cut(s) 863
SchI GAGTC 2 cut(s) 255, 488
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 4 cut(s) 88, 99, 273, 981
SetI ASST 8 cut(s) 99, 108, 119, 201, 258, 306, 511, 970
SfaNI GCATC 5 cut(s) 136, 208, 388, 649, 1003
SmiMI CAYNNNNRTG 1 cut(s) 288
SmlI CTYRAG 2 cut(s) 92, 98
SmoI CTYRAG 2 cut(s) 92, 98
Sse9I AATT 4 cut(s) 239, 311, 543, 903
SspI AATATT 1 cut(s) 589
SspMI CTAG 4 cut(s) 44, 191, 386, 663
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 1 cut(s) 141
TaaI ACNGT 1 cut(s) 31
TaqI TCGA 3 cut(s) 234, 264, 582
TasI AATT 4 cut(s) 239, 311, 543, 903
TatI WGTACW 2 cut(s) 136, 229
TfiI GAWTC 3 cut(s) 328, 959, 1021
Tru1I TTAA 3 cut(s) 342, 899, 1001
Tru9I TTAA 3 cut(s) 342, 899, 1001
TscAI CASTG 1 cut(s) 583
TseI GCWGC 2 cut(s) 56, 749
TspDTI ATGAA 3 cut(s) 806, 960, 972
TspRI CASTG 1 cut(s) 583
VneI GTGCAC 1 cut(s) 977
XapI RAATTY 1 cut(s) 239
XceI RCATGY 1 cut(s) 994
XspI CTAG 4 cut(s) 44, 191, 386, 663
Zsp2I ATGCAT 1 cut(s) 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.