Rorug07G0053000

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0013870
Physical Location & Seq
Forward (+)
3766130 .. 3769691
3562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0053000.1

Sequence Viewer

Length: 1827 bp
ATGGCGAAGCTTGGACCAACCCCAGATGCGATTTCGACCCTCTTGGCCAACCCATCGCCGGGCAGGTCCAGCCCGATCCCGGAGATCGTCGTCCAGGTCGTCGATCTCAATCTTAAGGGCAGCCGTTATATGTTTACTGCTAGTGATGGAAAGATGAGGCTAAAAGCGACGTTGAACTCAACTATGAGTTCTGATGTTATTTCGGGGAAAATTCAGAACCTGGGCCTCATTCGTGTTCTTGATTACACTGTTAATGACATTCCAAACAAGCCCGAAAAATATATGATTGTAACAAATTGTGAGATGGTTTCACCTGCGCTTGCGATGGAGATTAAAAGTGAGGTCAGTGAAGATGAGGTGAAAGAAGAACAGGTTGGGATTATTTTGAAGCCCAAGCATGAGATGGTGACTAAATCAGCTGCTCAAATTATGCATGAGCAGAATGCAAATATGGCCCCGGCTGCACGAATGGCCATGACCAGAAGGGTTCATCATCCTATTGTTTCCTTGAATCCTTATCAAGGCAATTGGACCATAAAGGTTCGTGTTACAAACAAGGGAACCATGCGTACTTACTCGAATGCTAGAGGTCAAGGCTGTGTCTTCAATGTGGAGTTAACAGATGAAGATGGAACTGAAATTCGAGCTACAATGTTTAATGAAGCTGCAAAGAAGTTCTATGAAAAGTTTCAACTAGGGAAGGTCTATTATGTTTCAAAGGGAGCTCTAAAGGTTGCTAACAAGAAGTTTAGCACAGTAAAAAATGATTATGAAATGACCTTAAATGAGAATTCTGAGGTGGATGAAGTCAGCAATGAAGAAGCTTTTGTTCCTGAAACAAAATTTGATTTTATCCCAATTGATATGTTGGGTCCCCATGTTAACAGCAAGGTGCTTGTGGATGTTATTGGAGTTGTTACAAATGTGTCTCCTACAATGAGCATCAGAAGAAAGAGCGACAATGAGAATATCCCAAAGCGTGACATTACCATTGCTGATGAGTCGAAAAAAGTGGTTGTGGTTTCTTTATGGAATGATCTTGCAACTGGTGTTGGCCAGGAATTGCTGGACATTGCTGATCAATCTCCTGTAGTTGCTATCAAATCCCTTAAAGTTGGAGACTATCAAGGTGTATCCTTGTCTACGGTTTCCAGGAGCTCAATATTTGTAAATCCAGATTTACCTGAAGCAAAGAGGTTGAAATCCTGGTATGATTCTGAAGGTAAAGAGGTTTCAATGGCACCTGTTGGTTCTGGTATGAGCCCATCAGCCAATAGTGGAGCATGGTCCATGTACTCTGATAGAATCTCCCTGTCTTATTTGAAAGATAACCCATCCTTGGGTGAGGACAAGCCTGTGTTTTTCATTGTTAAAGCTTACATAAGCTCCATTAAGCCTGATCAGACTCTCTGGTACCGGGCTTGCAAAATTTGCAACAAAAAGGTGACTGAAAGTCTGGATGGTGGTTTCTGGTGTGAAGGGTGCCAGAAAAATGCTGAAGAATGTAGTTTAAGGTATATATTAGTTGCAAGAGCTATGGATGCAACTAGTGAAGTATATCTTTCTGTGTTTAATAATGAAGCAGAAAGGATTATTGGGTGCTCTGCAGATGAGCTGGACAAACTGAGATCAGAGGAGCACAATCTGTATGAGGTGAAGTTGAAACAAGCTACTTGGGTTCCTCATCTTTTCAGGGTCAGTGTTTCTCAGAATGAGTACAATAACGAGAAGAGGCAAAGGATAACTGCCAGGGCAGCTGCTCCACTTGATTTTGCTGCTGAATCAAAATTTTTGCTAGAAGAGATATCAAAGATGAAAGCTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0030246
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box PP2

Protein Analysis

608

Amino Acids

67.65

Weight (kDa)

6.28

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rep-A_N PF04057 7 - 104 1.3e-18 Replication factor-A protein 1, N-terminal domain
DUF223 PF02721 164 - 268 5.3e-08 Domain of unknown function DUF223
tRNA_anti-codon PF01336 177 - 262 2.7e-09 OB-fold nucleic acid binding domain
REPA_OB_2 PF16900 294 - 391 7.1e-23 Replication protein A OB domain
Rep_fac-A_C PF08646 454 - 598 2.7e-44 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013870)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12710 AT1G12710 AT1G63090
fragaria_vesca FvH4_5g01540
malus_domestica MD04G1067200.v1.1 MD06G1073200.v1.1
prunus_persica Prupe.5G091600_v2.0.a1
pyrus_communis pycom04g06030
rosa_chinensis RchiOBHm_Chr7g0199151
rosa_laevigata RLG00000003810
rosa_multiflora Rmu_sc0006266.1_g000060
rosa_roxburghii Rroxscaffold_3G00257010
rosa_rugosa Rorug07G0053000
rosa_samantha Rh7BG180200 Rh7CG185800 Rh7DG179600
rosa_wichuraiana Rw7G015530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 322
Acc36I ACCTGC 2 cut(s) 54, 322
Acc65I GGTACC 1 cut(s) 1413
AccB1I GGYRCC 3 cut(s) 1240, 1413, 1482
AccI GTMKAC 1 cut(s) 1142
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 3 cut(s) 45, 471, 1054
AcsI RAATTY 6 cut(s) 210, 639, 790, 842, 1428, 1787
AcuI CTGAAG 3 cut(s) 1206, 1239, 1518
AfaI GTAC 4 cut(s) 571, 1295, 1415, 1718
AfiI CCNNNNNNNGG 6 cut(s) 58, 59, 79, 521, 1339, 1340
AflII CTTAAG 1 cut(s) 113
AhdI GACNNNNNGTC 1 cut(s) 1452
AhlI ACTAGT 1 cut(s) 1547
AjnI CCWGG 6 cut(s) 93, 219, 1056, 1151, 1205, 1748
AjuI GAANNNNNNNTTGG 4 cut(s) 357, 389, 1578, 1610
Alw21I GWGCWC 4 cut(s) 727, 1160, 1604, 1641
Alw26I GTCTC 2 cut(s) 933, 1113
AlwI GGATC 1 cut(s) 70
AlwNI CAGNNNCTG 1 cut(s) 220
AoxI GGCC 5 cut(s) 45, 223, 453, 471, 1054
ApeKI GCWGC 7 cut(s) 120, 419, 461, 665, 1754, 1757, 1775
ApoI RAATTY 6 cut(s) 210, 639, 790, 842, 1428, 1787
Asp700I GAANNNNTTC 1 cut(s) 687
Asp718I GGTACC 1 cut(s) 1413
AspLEI GCGC 1 cut(s) 319
AspS9I GGNCC 7 cut(s) 14, 66, 223, 454, 531, 872, 1287
AsuC2I CCSGG 4 cut(s) 60, 80, 458, 1418
AsuHPI GGTGA 6 cut(s) 303, 370, 418, 1355, 1456, 1666
AvaII GGWCC 5 cut(s) 14, 66, 531, 872, 1287
BalI TGGCCA 3 cut(s) 47, 473, 1056
BanI GGYRCC 3 cut(s) 1240, 1413, 1482
BanII GRGCYC 3 cut(s) 727, 1160, 1265
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 4 cut(s) 727, 1160, 1604, 1641
BbvI GCAGC 7 cut(s) 132, 406, 448, 652, 1744, 1762, 1766
BccI CCATC 9 cut(s) 61, 140, 298, 319, 397, 623, 1273, 1342, 1454
BceAI ACGGC 1 cut(s) 108
BciT130I CCWGG 6 cut(s) 95, 221, 1058, 1153, 1207, 1750
BciVI GTATCC 1 cut(s) 1144
BclI TGATCA 2 cut(s) 1078, 1399
BcnI CCSGG 4 cut(s) 60, 80, 458, 1418
BcoDI GTCTC 2 cut(s) 933, 1113
BcuI ACTAGT 1 cut(s) 1547
BfaI CTAG 5 cut(s) 141, 585, 695, 1548, 1796
BfmI CTRYAG 2 cut(s) 1089, 1605
BfrI CTTAAG 1 cut(s) 113
BfuAI ACCTGC 2 cut(s) 54, 322
BfuI GTATCC 1 cut(s) 1144
BisI GCNGC 7 cut(s) 121, 420, 462, 666, 1755, 1758, 1776
BlsI GCNGC 7 cut(s) 122, 421, 463, 667, 1756, 1759, 1777
Bme18I GGWCC 5 cut(s) 14, 66, 531, 872, 1287
BmeRI GACNNNNNGTC 1 cut(s) 1452
BmgT120I GGNCC 7 cut(s) 14, 66, 223, 454, 531, 872, 1287
BmiI GGNNCC 8 cut(s) 456, 562, 873, 874, 1242, 1415, 1484, 1680
BmsI GCATC 3 cut(s) 16, 951, 1531
BpiI GAAGAC 1 cut(s) 595
BpuMI CCSGG 4 cut(s) 60, 80, 458, 1418
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 4 cut(s) 220, 456, 1338, 1749
BsaXI ACNNNNNCTCC 2 cut(s) 1370, 1400
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 59, 79, 521, 1339, 1340
Bse1I ACTGG 1 cut(s) 1051
Bse3DI GCAATG 3 cut(s) 820, 990, 1071
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 6 cut(s) 95, 221, 1058, 1153, 1207, 1750
BseDI CCNNGG 4 cut(s) 220, 456, 1338, 1749
BseGI GGATG 6 cut(s) 493, 808, 907, 1334, 1465, 1546
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 6 cut(s) 58, 59, 79, 521, 1339, 1340
BseMI GCAATG 3 cut(s) 820, 990, 1071
BseMII CTCAG 3 cut(s) 786, 1616, 1721
BseNI ACTGG 1 cut(s) 1051
BseRI GAGGAG 1 cut(s) 1649
BseXI GCAGC 7 cut(s) 132, 406, 448, 652, 1744, 1762, 1766
BsgI GTGCAG 1 cut(s) 447
BshFI GGCC 5 cut(s) 47, 225, 455, 473, 1056
BshNI GGYRCC 3 cut(s) 1240, 1413, 1482
BsiHKAI GWGCWC 4 cut(s) 727, 1160, 1604, 1641
BsiSI CCGG 4 cut(s) 59, 80, 458, 1417
BslFI GGGAC 1 cut(s) 858
BslI CCNNNNNNNGG 6 cut(s) 58, 59, 79, 521, 1339, 1340
BsmAI GTCTC 2 cut(s) 933, 1113
BsmFI GGGAC 1 cut(s) 858
BsmI GAATGC 2 cut(s) 448, 586
BsnI GGCC 5 cut(s) 47, 225, 455, 473, 1056
Bsp1286I GDGCHC 5 cut(s) 727, 1160, 1265, 1604, 1641
Bsp143I GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
BspANI GGCC 5 cut(s) 47, 225, 455, 473, 1056
BspCNI CTCAG 3 cut(s) 787, 1617, 1720
BspLI GGNNCC 8 cut(s) 456, 562, 873, 874, 1242, 1415, 1484, 1680
BspMAI CTGCAG 1 cut(s) 1609
BspMI ACCTGC 2 cut(s) 54, 322
BspPI GGATC 1 cut(s) 70
BspT107I GGYRCC 3 cut(s) 1240, 1413, 1482
BspTI CTTAAG 1 cut(s) 113
BsrDI GCAATG 3 cut(s) 820, 990, 1071
BsrI ACTGG 1 cut(s) 1051
BssECI CCNNGG 4 cut(s) 220, 456, 1338, 1749
BssMI GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
BssT1I CCWWGG 1 cut(s) 1338
Bst2UI CCWGG 6 cut(s) 95, 221, 1058, 1153, 1207, 1750
Bst4CI ACNGT 3 cut(s) 250, 757, 1147
Bst6I CTCTTC 2 cut(s) 1724, 1794
BstAFI CTTAAG 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 1431
BstC8I GCNNGC 2 cut(s) 321, 1423
BstDEI CTNAG 3 cut(s) 795, 1625, 1707
BstENI CCTNNNNNAGG 1 cut(s) 519
BstF5I GGATG 6 cut(s) 493, 808, 907, 1334, 1465, 1546
BstHHI GCGC 1 cut(s) 319
BstKTI GATC 7 cut(s) 78, 87, 106, 1039, 1081, 1402, 1631
BstMAI GTCTC 2 cut(s) 933, 1113
BstMBI GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
BstMWI GCNNNNNNNGC 7 cut(s) 69, 452, 461, 470, 1431, 1541, 1754
BstNI CCWGG 6 cut(s) 95, 221, 1058, 1153, 1207, 1750
BstSFI CTRYAG 2 cut(s) 1089, 1605
BstV1I GCAGC 7 cut(s) 132, 406, 448, 652, 1744, 1762, 1766
BstV2I GAAGAC 1 cut(s) 595
BsuI GTATCC 1 cut(s) 1144
BsuRI GGCC 5 cut(s) 47, 225, 455, 473, 1056
BtgZI GCGATG 2 cut(s) 39, 338
BtsCI GGATG 6 cut(s) 493, 808, 907, 1334, 1465, 1546
BtsIMutI CAGTG 3 cut(s) 246, 352, 1705
BveI ACCTGC 2 cut(s) 54, 322
Cac8I GCNNGC 2 cut(s) 321, 1423
CaiI CAGNNNCTG 1 cut(s) 220
CfoI GCGC 1 cut(s) 319
Cfr13I GGNCC 7 cut(s) 14, 66, 223, 454, 531, 872, 1287
Csp6I GTAC 4 cut(s) 570, 1294, 1414, 1717
CviAII CATG 7 cut(s) 398, 434, 475, 565, 878, 1284, 1291
CviQI GTAC 4 cut(s) 570, 1294, 1414, 1717
DdeI CTNAG 3 cut(s) 795, 1625, 1707
DpnI GATC 7 cut(s) 77, 86, 105, 1038, 1080, 1401, 1630
DpnII GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
DriI GACNNNNNGTC 1 cut(s) 1452
EaeI YGGCCR 3 cut(s) 45, 471, 1054
Eam1104I CTCTTC 2 cut(s) 1724, 1794
Eam1105I GACNNNNNGTC 1 cut(s) 1452
EarI CTCTTC 2 cut(s) 1724, 1794
Ecl136II GAGCTC 2 cut(s) 725, 1158
Eco130I CCWWGG 1 cut(s) 1338
Eco24I GRGCYC 3 cut(s) 727, 1160, 1265
Eco32I GATATC 1 cut(s) 1806
Eco47I GGWCC 5 cut(s) 14, 66, 531, 872, 1287
Eco53kI GAGCTC 2 cut(s) 725, 1158
Eco57I CTGAAG 3 cut(s) 1206, 1239, 1518
EcoICRI GAGCTC 2 cut(s) 725, 1158
EcoNI CCTNNNNNAGG 1 cut(s) 519
EcoO109I RGGNCCY 1 cut(s) 872
EcoRI GAATTC 1 cut(s) 790
EcoRII CCWGG 6 cut(s) 93, 219, 1056, 1151, 1205, 1748
EcoRV GATATC 1 cut(s) 1806
EcoT14I CCWWGG 1 cut(s) 1338
EcoT22I ATGCAT 1 cut(s) 435
EcoT38I GRGCYC 3 cut(s) 727, 1160, 1265
ErhI CCWWGG 1 cut(s) 1338
FaeI CATG 7 cut(s) 401, 437, 478, 568, 881, 1287, 1294
FalI AAGNNNNNCTT 2 cut(s) 1545, 1577
FaqI GGGAC 1 cut(s) 858
FatI CATG 7 cut(s) 397, 433, 474, 564, 877, 1283, 1290
FbaI TGATCA 2 cut(s) 1078, 1399
FblI GTMKAC 1 cut(s) 1142
Fnu4HI GCNGC 7 cut(s) 121, 420, 462, 666, 1755, 1758, 1776
FokI GGATG 6 cut(s) 480, 815, 914, 1321, 1472, 1553
FriOI GRGCYC 3 cut(s) 727, 1160, 1265
Fsp4HI GCNGC 7 cut(s) 121, 420, 462, 666, 1755, 1758, 1776
FspBI CTAG 5 cut(s) 141, 585, 695, 1548, 1796
GlaI GCGC 1 cut(s) 318
GluI GCNGC 7 cut(s) 121, 420, 462, 666, 1755, 1758, 1776
HaeIII GGCC 5 cut(s) 47, 225, 455, 473, 1056
HapII CCGG 4 cut(s) 59, 80, 458, 1417
HhaI GCGC 1 cut(s) 319
Hin1II CATG 7 cut(s) 401, 437, 478, 568, 881, 1287, 1294
Hin6I GCGC 1 cut(s) 317
HinP1I GCGC 1 cut(s) 317
HincII GTYRAC 2 cut(s) 618, 883
HindII GTYRAC 2 cut(s) 618, 883
HindIII AAGCTT 4 cut(s) 8, 822, 1374, 1818
HinfI GANTC 6 cut(s) 511, 1001, 1214, 1305, 1405, 1781
HpaI GTTAAC 2 cut(s) 618, 883
HpaII CCGG 4 cut(s) 59, 80, 458, 1417
HphI GGTGA 6 cut(s) 303, 370, 418, 1355, 1456, 1666
Hpy166II GTNNAC 4 cut(s) 135, 618, 883, 1143
Hpy188I TCNGA 9 cut(s) 193, 216, 796, 947, 1219, 1300, 1404, 1633, 1710
Hpy188III TCNNGA 4 cut(s) 239, 833, 1175, 1457
Hpy8I GTNNAC 4 cut(s) 135, 618, 883, 1143
Hpy99I CGWCG 3 cut(s) 92, 104, 172
HpyAV CCTTC 4 cut(s) 477, 694, 1214, 1472
HpyCH4III ACNGT 3 cut(s) 250, 757, 1147
HpyCH4IV ACGT 1 cut(s) 170
HpyF10VI GCNNNNNNNGC 7 cut(s) 69, 452, 461, 470, 1431, 1541, 1754
HpyF3I CTNAG 3 cut(s) 795, 1625, 1707
HpySE526I ACGT 1 cut(s) 170
Hsp92II CATG 7 cut(s) 401, 437, 478, 568, 881, 1287, 1294
HspAI GCGC 1 cut(s) 317
KflI GGGWCCC 1 cut(s) 872
KpnI GGTACC 1 cut(s) 1417
Ksp22I TGATCA 2 cut(s) 1078, 1399
KspAI GTTAAC 2 cut(s) 618, 883
Kzo9I GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
LmnI GCTCC 6 cut(s) 722, 1155, 1280, 1391, 1636, 1765
Lsp1109I GCAGC 7 cut(s) 132, 406, 448, 652, 1744, 1762, 1766
LweI GCATC 3 cut(s) 16, 951, 1531
MaeI CTAG 5 cut(s) 141, 585, 695, 1548, 1796
MaeII ACGT 1 cut(s) 170
MaeIII GTNAC 6 cut(s) 289, 406, 547, 916, 980, 1444
MalI GATC 7 cut(s) 77, 86, 105, 1038, 1080, 1401, 1630
MboI GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
MboII GAAGA 9 cut(s) 362, 377, 595, 638, 830, 960, 1511, 1741, 1811
MfeI CAATTG 2 cut(s) 526, 858
MhlI GDGCHC 5 cut(s) 727, 1160, 1265, 1604, 1641
MlsI TGGCCA 3 cut(s) 47, 473, 1056
MluNI TGGCCA 3 cut(s) 47, 473, 1056
MlyI GAGTC 2 cut(s) 1010, 1399
MmeI TCCRAC 1 cut(s) 1096
Mox20I TGGCCA 3 cut(s) 47, 473, 1056
Mph1103I ATGCAT 1 cut(s) 435
MroXI GAANNNNTTC 1 cut(s) 687
MscI TGGCCA 3 cut(s) 47, 473, 1056
Msp20I TGGCCA 3 cut(s) 47, 473, 1056
MspA1I CMGCKG 2 cut(s) 419, 1757
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 4 cut(s) 59, 80, 458, 1417
MunI CAATTG 2 cut(s) 526, 858
Mva1269I GAATGC 2 cut(s) 448, 586
MvaI CCWGG 6 cut(s) 95, 221, 1058, 1153, 1207, 1750
MwoI GCNNNNNNNGC 7 cut(s) 69, 452, 461, 470, 1431, 1541, 1754
NciI CCSGG 4 cut(s) 60, 80, 458, 1418
NdeII GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
NlaIII CATG 7 cut(s) 401, 437, 478, 568, 881, 1287, 1294
NlaIV GGNNCC 8 cut(s) 456, 562, 873, 874, 1242, 1415, 1484, 1680
NmuCI GTSAC 3 cut(s) 406, 980, 1444
NsiI ATGCAT 1 cut(s) 435
PaqCI CACCTGC 1 cut(s) 322
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 2 cut(s) 448, 586
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 4 cut(s) 511, 1214, 1305, 1781
PfoI TCCNGGA 2 cut(s) 78, 1151
PkrI GCNGC 7 cut(s) 122, 421, 463, 667, 1756, 1759, 1777
PleI GAGTC 2 cut(s) 1009, 1399
PpsI GAGTC 2 cut(s) 1009, 1399
PpuMI RGGWCCY 1 cut(s) 872
Psp124BI GAGCTC 2 cut(s) 727, 1160
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 6 cut(s) 93, 219, 1056, 1151, 1205, 1748
PspGI CCWGG 6 cut(s) 93, 219, 1056, 1151, 1205, 1748
PspN4I GGNNCC 8 cut(s) 456, 562, 873, 874, 1242, 1415, 1484, 1680
PspPI GGNCC 7 cut(s) 14, 66, 223, 454, 531, 872, 1287
PspPPI RGGWCCY 1 cut(s) 872
PsrI GAACNNNNNNTAC 2 cut(s) 553, 585
PstI CTGCAG 1 cut(s) 1609
PstNI CAGNNNCTG 1 cut(s) 220
PvuII CAGCTG 2 cut(s) 419, 1757
RsaI GTAC 4 cut(s) 571, 1295, 1415, 1718
RsaNI GTAC 4 cut(s) 570, 1294, 1414, 1717
SacI GAGCTC 2 cut(s) 727, 1160
SatI GCNGC 7 cut(s) 121, 420, 462, 666, 1755, 1758, 1776
Sau3AI GATC 7 cut(s) 75, 84, 103, 1036, 1078, 1399, 1628
Sau96I GGNCC 7 cut(s) 14, 66, 223, 454, 531, 872, 1287
SchI GAGTC 2 cut(s) 1010, 1399
SduI GDGCHC 5 cut(s) 727, 1160, 1265, 1604, 1641
SfaNI GCATC 3 cut(s) 16, 951, 1531
SfcI CTRYAG 2 cut(s) 1089, 1605
SinI GGWCC 5 cut(s) 14, 66, 531, 872, 1287
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
SpeI ACTAGT 1 cut(s) 1547
SspI AATATT 1 cut(s) 1164
SspMI CTAG 5 cut(s) 141, 585, 695, 1548, 1796
SstI GAGCTC 2 cut(s) 727, 1160
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 3 cut(s) 250, 757, 1147
TaiI ACGT 1 cut(s) 173
TaqI TCGA 5 cut(s) 35, 102, 578, 643, 1004
TatI WGTACW 2 cut(s) 1293, 1716
TfiI GAWTC 4 cut(s) 511, 1214, 1305, 1781
TscAI CASTG 3 cut(s) 253, 352, 1705
TseFI GTSAC 3 cut(s) 406, 980, 1444
TseI GCWGC 7 cut(s) 120, 419, 461, 665, 1754, 1757, 1775
Tsp45I GTSAC 3 cut(s) 406, 980, 1444
TspDTI ATGAA 9 cut(s) 479, 639, 675, 696, 786, 819, 831, 1354, 1593
TspRI CASTG 3 cut(s) 253, 352, 1705
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 5 cut(s) 14, 66, 531, 872, 1287
XagI CCTNNNNNAGG 1 cut(s) 519
XapI RAATTY 6 cut(s) 210, 639, 790, 842, 1428, 1787
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 1142
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 5 cut(s) 141, 585, 695, 1548, 1796
Zsp2I ATGCAT 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.