Rorug07G0064300

Myelodysplasia-myeloid leukemia factor 1-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0015615
Physical Location & Seq
Reverse (-)
4849321 .. 4851916
2596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0064300.1

Sequence Viewer

Length: 2310 bp
ATGAAGCCACAAATCCTCTCAATTCTCAAAGGCGCCAAACCAAACCAAAACCATGTCAACTTGGCAAGAACCCAAACTCCTACTCTTCTTCTCGGTCCTCCAGAGATCGGAACAGTAACCACCACCACTGCTCCACCACAAGTCAATTCCGGCGACCCCTTCATGGATCTCATGGTCTCCAATTACAACAACACCACGTCAACTTCCCCCCGACCCCCAATGGGTTTGACCGAGAACAGTTCGCCTACTTTTCTCACCTCCGGCAACCCCTGCCTTGATTTTTTCTTCCACGTGGTGCCTGACACCAAGCCTGAATATTTCAACCAACAGCTCCCCTTGGCTTGGTCCAACGATGCCGTAACCACTCTCAAGCTCATCTGCAACCTGCGAGGTGTACGTGGCACCGGAAAGTGTGACAAAGAAGGGTTCTACACAGCAGCGTATTGGCTCTACAACCACCATCCTAAAACCCTAGCTTACAATGTAGCGTCGGTTGCCGCTTTTGGGTATTTCAAAGATCTGCCGGAGATTCTATACCGCCTTCTAGAAGGCCAAGACATCAGGAAGACCCAAAAGGAAGAGTGGGAAAGTATCAAGCGCTATTTCTATAAGGGACCGGGTAAGGTAGACGGGTTAAGGTCACTAAAGCTTGGGCATTTAATGGGTCCGCCGGCGGATCATCCACCTAGAGATGTTAAACTGCTGAGGCTTTGGGAGAAACTCATCGCCGTCAAATCTAACAAGAAAAAACTCGAGAAGGGGGAGTATAAAACTGTTCAAGCAGAATGGGCAGCGGATAGAGATGAACTGAAAAGTGATGAAGCTAGAGAACTGATGCATCAAAAGATCATAGACAAGACCAAGAATGCCGTGGCTAGGTATGAGCAAGACTCGGATTTGAAGTTCCTATACGAACAAATTTGGGATGTGTTTGGGGATTGCTTGAAGTCCATGGAGGCGGACACGGAGGCTGAGAGGAACGAGATGTTCCGATTGAAAAAAGAAAACGTCAGGGAATTGAGGTATGAAAGAATCTATGACATGGCCAGGAAGGTGGTTTCCAGGTATCAGCAAGACTCCAATTTTCAGGTGCTTCACGAGCAGATTTCTGATGTTTTCGCCGAGTGCTTGAGATCTGACATGGAATGCTTGAAGAAGCACCAGAGAAACAAGATAAGCCTCGCAGCGAAATGGTGCCCTTCCCTCGACTCCTCCTTCGACAAGGCCACTTTGCTCTGCGAAAGCATTGCCAGGAAGGTTTTCCCGCGTGAATTGTACCCGGAGTATCAGGGACTTGAGGAGGCACACTATGCTTACAGAGTGAGAGACCGGCTGAGGAAGGAGGTTTATGTGCCGTTGAGGAGGGCATTGGAATTGCCGGAACTTTATATGACTGACAGAGAGTGGAATTCACTTCCTTACAACAGGGTGGCCTCTGTGGCAATGAAGCTCTACAAACATAGGTTCATTGAGAAGGACTGTGAGAGGTTTGAAAAATATTTGGCGGAAGTGAAAGAAGGTAAGGCCAAGATTGCGGCCGGTGCTCTGCTTCCGCATGAGATCATAGCCTCTCTGAATGATGGGGATGGAGGTCAAGTGGCTGAGCTTCAGTGGAAGAGAATGGTGGAGGACCTGGTGGAGCTTGGCAAGCTGAGGAATTGCTTGGCTGTGTGTGACGTGTCCGGAAGCATGGAAGGGACTCCTATGGAGGTGTGTGTGGCTTTGGGTCTGTTGGTGTCGGAATTGAGTGAAGAGCCATGGAAAGGAAAGGTGATCACTTTCAGTCAGAACCCTCAGTTGCATTTGATTCAAGGAGAGGATCTTAGCTCCAAGTGCGAGTTTGTGACGAGGATGGACTGGGGGATGAACACTGATTTTCAAAAGGTGTTTGATCTGATTCTCCAAGTGGCTGTGAAGGGGAAGTTGAAGCCGGAGCAGATGATAAAGAGGGTGTTTGTGTTCAGCGACATGGAGTTTGATGAGGCTTCAGGGCATAGGGGATATGGATATGGGTATTATGGAAGGGAGGATAATGAGCCCCAGAGCTGGGAGACCGATTATGAGGTGATACAGAGGAAGTTTAGGGAGAAAGGGTACGGGGATGCAGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCTAGGTCTACGCCGGTAACGGAGACACAAAATGGAGTGGCGCTGGTGAGTGGCTTCTCCAAGAATCTGCTCAAGCTGTTCTTGGACAATGATGGCCAAATTCGGCCGGACCTTATCATGGAAAAAGCTATCTCTGGGAAAGAGTATCAGCATCTAGTTGTTGTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05202 map05202
Pfam Domains
Protein Families
Mlf1IP

Protein Analysis

769

Amino Acids

88.41

Weight (kDa)

6.49

Isoelectric Point (pI)

32.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 77 - 317 7.7e-49 Domain of unknown function (DUF2828)
DUF2828 PF11443 324 - 551 1e-82 Domain of unknown function (DUF2828)
DUF7788 PF25043 553 - 747 5e-83 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015615)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g00720
malus_domestica MD04G1079300.v1.1
prunus_persica Prupe.5G079800_v2.0.a1
pyrus_communis pycom04g07110
rosa_chinensis RchiOBHm_Chr7g0201491
rosa_laevigata RLG00000003669
rosa_multiflora Rmu_co8397869.1_g000001 Rmu_sc0002046.1_g000005 Rmu_sc0017656.1_g000004
rosa_roxburghii Rroxscaffold_3G00255260
rosa_rugosa Rorug07G0064300
rosa_samantha Rh7AG190900 Rh7BG193200 Rh7CG202300 Rh7DG195900
rosa_wichuraiana Rw7G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 393
AccB1I GGYRCC 4 cut(s) 32, 295, 401, 1194
AccI GTMKAC 2 cut(s) 627, 2147
AccII CGCG 1 cut(s) 1267
AccIII TCCGGA 1 cut(s) 1682
AclWI GGATC 3 cut(s) 174, 684, 1827
AcoI YGGCCR 4 cut(s) 1044, 1536, 2233, 2243
AcsI RAATTY 3 cut(s) 918, 1408, 2238
AcuI CTGAAG 2 cut(s) 1592, 1971
AcvI CACGTG 1 cut(s) 292
AcyI GRCGYC 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 3 cut(s) 396, 1277, 2096
AfeI AGCGCT 1 cut(s) 599
AflIII ACRYGT 1 cut(s) 1677
AhdI GACNNNNNGTC 1 cut(s) 2143
AjiI CACGTC 2 cut(s) 198, 1678
AjnI CCWGG 4 cut(s) 1046, 1061, 1250, 1632
AloI GAACNNNNNNTCC 4 cut(s) 61, 93, 887, 919
Alw21I GWGCWC 1 cut(s) 1546
Alw26I GTCTC 4 cut(s) 181, 1320, 2045, 2156
AlwI GGATC 3 cut(s) 174, 684, 1827
Ama87I CYCGRG 1 cut(s) 752
Aor13HI TCCGGA 1 cut(s) 1682
Aor51HI AGCGCT 1 cut(s) 599
AoxI GGCC 8 cut(s) 550, 1044, 1224, 1431, 1524, 1536, 2233, 2243
ApeKI GCWGC 3 cut(s) 437, 791, 1184
ApoI RAATTY 3 cut(s) 918, 1408, 2238
ArsI GACNNNNNNTTYG 4 cut(s) 1199, 1231, 1958, 1990
Asp700I GAANNNNTTC 1 cut(s) 1259
AspLEI GCGC 3 cut(s) 35, 600, 2182
AspS9I GGNCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
AsuC2I CCSGG 2 cut(s) 618, 1280
AsuHPI GGTGA 4 cut(s) 247, 1783, 2077, 2197
AvaI CYCGRG 1 cut(s) 752
AvaII GGWCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
BaeGI GKGCMC 1 cut(s) 1199
BalI TGGCCA 2 cut(s) 1046, 2235
BanI GGYRCC 4 cut(s) 32, 295, 401, 1194
BanII GRGCYC 1 cut(s) 2040
BarI GAAGNNNNNNTAC 2 cut(s) 893, 925
BauI CACGAG 1 cut(s) 1097
BbrPI CACGTG 1 cut(s) 292
BbsI GAAGAC 1 cut(s) 572
Bbv12I GWGCWC 1 cut(s) 1546
BbvCI CCTCAGC 3 cut(s) 704, 1334, 1652
BbvI GCAGC 3 cut(s) 449, 803, 1196
BccI CCATC 5 cut(s) 468, 1574, 1580, 1846, 2225
BceAI ACGGC 4 cut(s) 341, 713, 854, 1339
BcgI CGANNNNNNTGC 2 cut(s) 1229, 1263
BciT130I CCWGG 4 cut(s) 1048, 1063, 1252, 1634
BclI TGATCA 1 cut(s) 1773
BcnI CCSGG 2 cut(s) 618, 1280
BcoDI GTCTC 4 cut(s) 181, 1320, 2045, 2156
BfaI CTAG 7 cut(s) 473, 545, 687, 825, 876, 2142, 2294
BfoI RGCGCY 3 cut(s) 36, 601, 2183
BfuAI ACCTGC 1 cut(s) 393
BglI GCCNNNNNGGC 1 cut(s) 1439
BglII AGATCT 2 cut(s) 517, 1133
BisI GCNGC 5 cut(s) 438, 498, 792, 1185, 1536
BlpI GCTNAGC 1 cut(s) 1602
BlsI GCNGC 5 cut(s) 439, 499, 793, 1186, 1537
Bme1390I CCNGG 6 cut(s) 618, 1048, 1063, 1252, 1280, 1634
Bme18I GGWCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
BmeRI GACNNNNNGTC 1 cut(s) 2143
BmeT110I CYCGRG 1 cut(s) 752
BmgBI CACGTC 2 cut(s) 198, 1678
BmgT120I GGNCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
BmiI GGNNCC 6 cut(s) 34, 297, 403, 615, 666, 1196
BmrFI CCNGG 6 cut(s) 618, 1048, 1063, 1252, 1280, 1634
BmrI ACTGGG 1 cut(s) 1867
BmsI GCATC 5 cut(s) 343, 825, 847, 2092, 2299
BmuI ACTGGG 1 cut(s) 1867
BpiI GAAGAC 1 cut(s) 572
BplI GAGNNNNNCTC 2 cut(s) 875, 907
BpmI CTGGAG 1 cut(s) 84
Bpu10I CCTNAGC 3 cut(s) 704, 1334, 1652
Bpu1102I GCTNAGC 1 cut(s) 1602
BpuEI CTTGAG 4 cut(s) 353, 1150, 1316, 2195
BpuMI CCSGG 2 cut(s) 618, 1280
BsaAI YACGTR 2 cut(s) 292, 398
BsaHI GRCGYC 1 cut(s) 33
BsaI GGTCTC 3 cut(s) 181, 1320, 2045
BsaJI CCNNGG 4 cut(s) 336, 870, 951, 1757
BsaWI WCCGGW 2 cut(s) 404, 1682
BsaXI ACNNNNNCTCC 8 cut(s) 61, 91, 115, 145, 1581, 1611, 2078, 2108
Bse118I RCCGGY 4 cut(s) 670, 1329, 1538, 2152
Bse1I ACTGG 1 cut(s) 1862
Bse3DI GCAATG 2 cut(s) 1245, 1449
BseAI TCCGGA 1 cut(s) 1682
BseBI CCWGG 4 cut(s) 1048, 1063, 1252, 1634
BseDI CCNNGG 4 cut(s) 336, 870, 951, 1757
BseGI GGATG 7 cut(s) 460, 679, 931, 1591, 1857, 1869, 2107
BseMI GCAATG 2 cut(s) 1245, 1449
BseMII CTCAG 7 cut(s) 695, 963, 1325, 1593, 1643, 1808, 2123
BseNI ACTGG 1 cut(s) 1862
BseRI GAGGAG 3 cut(s) 1201, 1313, 1375
BseSI GKGCMC 1 cut(s) 1199
BseX3I CGGCCG 2 cut(s) 1536, 2243
BseXI GCAGC 3 cut(s) 449, 803, 1196
BseYI CCCAGC 1 cut(s) 2046
Bsh1236I CGCG 1 cut(s) 1267
Bsh1285I CGRYCG 2 cut(s) 1539, 2246
BshFI GGCC 8 cut(s) 552, 1046, 1226, 1433, 1526, 1538, 2235, 2245
BshNI GGYRCC 4 cut(s) 32, 295, 401, 1194
BsiEI CGRYCG 2 cut(s) 1539, 2246
BsiHKAI GWGCWC 1 cut(s) 1546
BsiHKCI CYCGRG 1 cut(s) 752
BslFI GGGAC 4 cut(s) 627, 1305, 1711, 2150
BsmAI GTCTC 4 cut(s) 181, 1320, 2045, 2156
BsmFI GGGAC 4 cut(s) 627, 1305, 1711, 2150
BsmI GAATGC 2 cut(s) 871, 1151
BsnI GGCC 8 cut(s) 552, 1046, 1226, 1433, 1526, 1538, 2235, 2245
Bso31I GGTCTC 3 cut(s) 181, 1320, 2045
BsoBI CYCGRG 1 cut(s) 752
Bsp1286I GDGCHC 3 cut(s) 1199, 1546, 2040
Bsp13I TCCGGA 1 cut(s) 1682
Bsp1720I GCTNAGC 1 cut(s) 1602
Bsp19I CCATGG 2 cut(s) 951, 1757
BspANI GGCC 8 cut(s) 552, 1046, 1226, 1433, 1526, 1538, 2235, 2245
BspCNI CTCAG 7 cut(s) 696, 964, 1326, 1594, 1644, 1807, 2124
BspEI TCCGGA 1 cut(s) 1682
BspFNI CGCG 1 cut(s) 1267
BspLI GGNNCC 6 cut(s) 34, 297, 403, 615, 666, 1196
BspMI ACCTGC 1 cut(s) 393
BspPI GGATC 3 cut(s) 174, 684, 1827
BspQI GCTCTTC 1 cut(s) 1746
BspT107I GGYRCC 4 cut(s) 32, 295, 401, 1194
BspTNI GGTCTC 3 cut(s) 181, 1320, 2045
BsrDI GCAATG 2 cut(s) 1245, 1449
BsrFI RCCGGY 4 cut(s) 670, 1329, 1538, 2152
BsrI ACTGG 1 cut(s) 1862
BssAI RCCGGY 4 cut(s) 670, 1329, 1538, 2152
BssECI CCNNGG 4 cut(s) 336, 870, 951, 1757
BssNI GRCGYC 1 cut(s) 33
BssSI CACGAG 1 cut(s) 1097
BssT1I CCWWGG 3 cut(s) 336, 951, 1757
Bst2BI CACGAG 1 cut(s) 1097
Bst2UI CCWGG 4 cut(s) 1048, 1063, 1252, 1634
Bst4CI ACNGT 4 cut(s) 115, 239, 775, 1481
Bst6I CTCTTC 4 cut(s) 90, 573, 1610, 1746
BstACI GRCGYC 1 cut(s) 33
BstAPI GCANNNNNTGC 2 cut(s) 270, 1310
BstBAI YACGTR 2 cut(s) 292, 398
BstC8I GCNNGC 2 cut(s) 672, 1649
BstDEI CTNAG 8 cut(s) 704, 972, 1334, 1602, 1652, 1794, 1823, 2132
BstDSI CCRYGG 3 cut(s) 870, 951, 1757
BstF5I GGATG 7 cut(s) 460, 679, 931, 1591, 1857, 1869, 2107
BstFNI CGCG 1 cut(s) 1267
BstH2I RGCGCY 3 cut(s) 36, 601, 2183
BstHHI GCGC 3 cut(s) 35, 600, 2182
BstMAI GTCTC 4 cut(s) 181, 1320, 2045, 2156
BstMCI CGRYCG 2 cut(s) 1539, 2246
BstNI CCWGG 4 cut(s) 1048, 1063, 1252, 1634
BstSCI CCNGG 6 cut(s) 616, 1046, 1061, 1250, 1278, 1632
BstSLI GKGCMC 1 cut(s) 1199
BstUI CGCG 1 cut(s) 1267
BstV1I GCAGC 3 cut(s) 449, 803, 1196
BstV2I GAAGAC 1 cut(s) 572
BstX2I RGATCY 4 cut(s) 166, 517, 1133, 1819
BstXI CCANNNNNNTGG 1 cut(s) 1054
BstYI RGATCY 4 cut(s) 166, 517, 1133, 1819
BstZI CGGCCG 2 cut(s) 1536, 2243
BsuRI GGCC 8 cut(s) 552, 1046, 1226, 1433, 1526, 1538, 2235, 2245
BtgI CCRYGG 3 cut(s) 870, 951, 1757
BtgZI GCGATG 1 cut(s) 709
BtrI CACGTC 2 cut(s) 198, 1678
BtsCI GGATG 7 cut(s) 460, 679, 931, 1591, 1857, 1869, 2107
BtsI GCAGTG 2 cut(s) 126, 2112
BtsIMutI CAGTG 4 cut(s) 126, 1616, 1869, 2112
BveI ACCTGC 1 cut(s) 393
Cac8I GCNNGC 2 cut(s) 672, 1649
CfoI GCGC 3 cut(s) 35, 600, 2182
Cfr10I RCCGGY 4 cut(s) 670, 1329, 1538, 2152
Cfr13I GGNCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
CseI GACGC 1 cut(s) 477
CsiI ACCWGGT 1 cut(s) 1632
Csp6I GTAC 3 cut(s) 395, 1276, 2095
CviQI GTAC 3 cut(s) 395, 1276, 2095
DdeI CTNAG 8 cut(s) 704, 972, 1334, 1602, 1652, 1794, 1823, 2132
DinI GGCGCC 1 cut(s) 34
DraIII CACNNNGTG 1 cut(s) 295
DriI GACNNNNNGTC 1 cut(s) 2143
EaeI YGGCCR 4 cut(s) 1044, 1536, 2233, 2243
EagI CGGCCG 2 cut(s) 1536, 2243
Eam1104I CTCTTC 4 cut(s) 90, 573, 1610, 1746
Eam1105I GACNNNNNGTC 1 cut(s) 2143
EarI CTCTTC 4 cut(s) 90, 573, 1610, 1746
EciI GGCGGA 4 cut(s) 657, 689, 974, 1520
EclXI CGGCCG 2 cut(s) 1536, 2243
Eco130I CCWWGG 3 cut(s) 336, 951, 1757
Eco24I GRGCYC 1 cut(s) 2040
Eco31I GGTCTC 3 cut(s) 181, 1320, 2045
Eco47I GGWCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
Eco47III AGCGCT 1 cut(s) 599
Eco52I CGGCCG 2 cut(s) 1536, 2243
Eco57I CTGAAG 2 cut(s) 1592, 1971
Eco72I CACGTG 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 752
EcoO109I RGGNCCY 1 cut(s) 1630
EcoRI GAATTC 1 cut(s) 1408
EcoRII CCWGG 4 cut(s) 1046, 1061, 1250, 1632
EcoT14I CCWWGG 3 cut(s) 336, 951, 1757
EcoT22I ATGCAT 1 cut(s) 840
EcoT38I GRGCYC 1 cut(s) 2040
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 3 cut(s) 336, 951, 1757
FalI AAGNNNNNCTT 2 cut(s) 2204, 2236
FaqI GGGAC 4 cut(s) 627, 1305, 1711, 2150
FauI CCCGC 1 cut(s) 1272
FbaI TGATCA 1 cut(s) 1773
FblI GTMKAC 2 cut(s) 627, 2147
Fnu4HI GCNGC 5 cut(s) 438, 498, 792, 1185, 1536
FokI GGATG 7 cut(s) 447, 666, 938, 1598, 1864, 1876, 2114
FriOI GRGCYC 1 cut(s) 2040
Fsp4HI GCNGC 5 cut(s) 438, 498, 792, 1185, 1536
FspBI CTAG 7 cut(s) 473, 545, 687, 825, 876, 2142, 2294
GlaI GCGC 3 cut(s) 34, 599, 2181
GluI GCNGC 5 cut(s) 438, 498, 792, 1185, 1536
GsaI CCCAGC 1 cut(s) 2050
GsuI CTGGAG 1 cut(s) 84
HaeII RGCGCY 3 cut(s) 36, 601, 2183
HaeIII GGCC 8 cut(s) 552, 1046, 1226, 1433, 1526, 1538, 2235, 2245
HgaI GACGC 1 cut(s) 477
HhaI GCGC 3 cut(s) 35, 600, 2182
Hin1I GRCGYC 1 cut(s) 33
Hin6I GCGC 3 cut(s) 33, 598, 2180
HinP1I GCGC 3 cut(s) 33, 598, 2180
HincII GTYRAC 2 cut(s) 58, 201
HindII GTYRAC 2 cut(s) 58, 201
HindIII AAGCTT 1 cut(s) 647
HphI GGTGA 4 cut(s) 247, 1783, 2077, 2197
Hpy166II GTNNAC 5 cut(s) 58, 201, 395, 628, 2148
Hpy188III TCNNGA 6 cut(s) 101, 545, 562, 754, 1097, 1683
Hpy8I GTNNAC 5 cut(s) 58, 201, 395, 628, 2148
Hpy99I CGWCG 1 cut(s) 493
HpyCH4III ACNGT 4 cut(s) 115, 239, 775, 1481
HpyCH4IV ACGT 5 cut(s) 197, 291, 397, 1008, 1677
HpyCH4V TGCA 4 cut(s) 381, 838, 1801, 2105
HpyF3I CTNAG 8 cut(s) 704, 972, 1334, 1602, 1652, 1794, 1823, 2132
HpySE526I ACGT 5 cut(s) 197, 291, 397, 1008, 1677
Hsp92I GRCGYC 1 cut(s) 33
HspAI GCGC 3 cut(s) 33, 598, 2180
KasI GGCGCC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 1682
KroI GCCGGC 1 cut(s) 670
KroNI GCCGGC 1 cut(s) 672
Ksp22I TGATCA 1 cut(s) 1773
LguI GCTCTTC 1 cut(s) 1746
LmnI GCTCC 5 cut(s) 136, 336, 1639, 1832, 1933
Lsp1109I GCAGC 3 cut(s) 449, 803, 1196
LweI GCATC 5 cut(s) 343, 825, 847, 2092, 2299
MabI ACCWGGT 1 cut(s) 1632
MaeI CTAG 7 cut(s) 473, 545, 687, 825, 876, 2142, 2294
MaeII ACGT 5 cut(s) 197, 291, 397, 1008, 1677
MaeIII GTNAC 7 cut(s) 115, 358, 413, 639, 1673, 1843, 2155
MboII GAAGA 8 cut(s) 77, 80, 277, 577, 590, 1165, 1627, 1763
MflI RGATCY 4 cut(s) 166, 517, 1133, 1819
MhlI GDGCHC 3 cut(s) 1199, 1546, 2040
MlsI TGGCCA 2 cut(s) 1046, 2235
MluNI TGGCCA 2 cut(s) 1046, 2235
Mly113I GGCGCC 1 cut(s) 33
MlyI GAGTC 5 cut(s) 884, 1070, 1202, 1693, 2132
MmeI TCCRAC 2 cut(s) 372, 1719
Mox20I TGGCCA 2 cut(s) 1046, 2235
Mph1103I ATGCAT 1 cut(s) 840
MreI CGCCGGCG 1 cut(s) 670
MroI TCCGGA 1 cut(s) 1682
MroNI GCCGGC 1 cut(s) 670
MroXI GAANNNNTTC 1 cut(s) 1259
MscI TGGCCA 2 cut(s) 1046, 2235
MseI TTAA 4 cut(s) 635, 659, 696, 2308
Msp20I TGGCCA 2 cut(s) 1046, 2235
MspA1I CMGCKG 1 cut(s) 794
MspR9I CCNGG 6 cut(s) 618, 1048, 1063, 1252, 1280, 1634
Mva1269I GAATGC 2 cut(s) 871, 1151
MvaI CCWGG 4 cut(s) 1048, 1063, 1252, 1634
MvnI CGCG 1 cut(s) 1267
NaeI GCCGGC 1 cut(s) 672
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 2 cut(s) 618, 1280
NcoI CCATGG 2 cut(s) 951, 1757
NgoMIV GCCGGC 1 cut(s) 670
NlaIV GGNNCC 6 cut(s) 34, 297, 403, 615, 666, 1196
NmeAIII GCCGAG 1 cut(s) 1147
NmuCI GTSAC 4 cut(s) 413, 639, 1673, 1843
NsiI ATGCAT 1 cut(s) 840
PaeR7I CTCGAG 1 cut(s) 752
PciSI GCTCTTC 1 cut(s) 1746
PctI GAATGC 2 cut(s) 871, 1151
PdiI GCCGGC 1 cut(s) 672
PdmI GAANNNNTTC 1 cut(s) 1259
PfeI GAWTC 6 cut(s) 529, 1032, 1807, 1897, 2128, 2203
PkrI GCNGC 5 cut(s) 439, 499, 793, 1186, 1537
PleI GAGTC 5 cut(s) 884, 1070, 1202, 1693, 2132
PluTI GGCGCC 1 cut(s) 36
PmaCI CACGTG 1 cut(s) 292
PmlI CACGTG 1 cut(s) 292
PpsI GAGTC 5 cut(s) 884, 1070, 1202, 1693, 2132
Ppu21I YACGTR 2 cut(s) 292, 398
PpuMI RGGWCCY 1 cut(s) 1630
Psp5II RGGWCCY 1 cut(s) 1630
Psp6I CCWGG 4 cut(s) 1046, 1061, 1250, 1632
PspCI CACGTG 1 cut(s) 292
PspFI CCCAGC 1 cut(s) 2046
PspGI CCWGG 4 cut(s) 1046, 1061, 1250, 1632
PspN4I GGNNCC 6 cut(s) 34, 297, 403, 615, 666, 1196
PspPI GGNCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
PspPPI RGGWCCY 1 cut(s) 1630
PsuI RGATCY 4 cut(s) 166, 517, 1133, 1819
RsaI GTAC 3 cut(s) 396, 1277, 2096
RsaNI GTAC 3 cut(s) 395, 1276, 2095
SapI GCTCTTC 1 cut(s) 1746
SaqAI TTAA 4 cut(s) 635, 659, 696, 2308
SatI GCNGC 5 cut(s) 438, 498, 792, 1185, 1536
Sau96I GGNCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
SchI GAGTC 5 cut(s) 884, 1070, 1202, 1693, 2132
ScrFI CCNGG 6 cut(s) 618, 1048, 1063, 1252, 1280, 1634
SduI GDGCHC 3 cut(s) 1199, 1546, 2040
SexAI ACCWGGT 1 cut(s) 1632
SfaNI GCATC 5 cut(s) 343, 825, 847, 2092, 2299
SfoI GGCGCC 1 cut(s) 34
Sfr274I CTCGAG 1 cut(s) 752
SgrAI CRCCGGYG 1 cut(s) 670
SinI GGWCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
SlaI CTCGAG 1 cut(s) 752
SmlI CTYRAG 5 cut(s) 368, 752, 1129, 1295, 2210
SmoI CTYRAG 5 cut(s) 368, 752, 1129, 1295, 2210
SspDI GGCGCC 1 cut(s) 32
SspI AATATT 2 cut(s) 317, 1499
SspMI CTAG 7 cut(s) 473, 545, 687, 825, 876, 2142, 2294
StyD4I CCNGG 6 cut(s) 616, 1046, 1061, 1250, 1278, 1632
StyI CCWWGG 3 cut(s) 336, 951, 1757
TaaI ACNGT 4 cut(s) 115, 239, 775, 1481
TaiI ACGT 5 cut(s) 200, 294, 400, 1011, 1680
TaqI TCGA 3 cut(s) 753, 1206, 1218
TaqII GACCGA 3 cut(s) 83, 245, 2069
TauI GCSGC 2 cut(s) 500, 1538
TfiI GAWTC 6 cut(s) 529, 1032, 1807, 1897, 2128, 2203
Tru1I TTAA 4 cut(s) 635, 659, 696, 2308
Tru9I TTAA 4 cut(s) 635, 659, 696, 2308
TscAI CASTG 4 cut(s) 133, 1616, 1876, 2112
TseFI GTSAC 4 cut(s) 413, 639, 1673, 1843
TseI GCWGC 3 cut(s) 437, 791, 1184
Tsp45I GTSAC 4 cut(s) 413, 639, 1673, 1843
TspDTI ATGAA 8 cut(s) 17, 151, 819, 834, 1041, 1456, 1460, 1880
TspGWI ACGGA 2 cut(s) 980, 2174
TspRI CASTG 4 cut(s) 133, 1616, 1876, 2112
VpaK11BI GGWCC 6 cut(s) 95, 345, 614, 665, 1630, 2248
XapI RAATTY 3 cut(s) 918, 1408, 2238
XbaI TCTAGA 1 cut(s) 544
XcmI CCANNNNNNNNNTGG 1 cut(s) 868
XhoI CTCGAG 1 cut(s) 752
XmiI GTMKAC 2 cut(s) 627, 2147
XmnI GAANNNNTTC 1 cut(s) 1259
XspI CTAG 7 cut(s) 473, 545, 687, 825, 876, 2142, 2294
Zsp2I ATGCAT 1 cut(s) 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.