Rorug07G0075600

U1-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0016854
Physical Location & Seq
Forward (+)
5808928 .. 5810847
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0075600.1

Sequence Viewer

Length: 1863 bp
ATGTCTATGAGTCTGAACTTTCTGGGAGGAGCACCTTTTCAACTCCTATACGATGGTGTTAGGGTAGCCATAGGTAGAACTACCAAGTTCAAAGCCCTCCTCTTAAATCTCGAATCGACGCTAGACTGTTTGCAACCACGAGTCATCCAGCAGATAAGAGACCATAATGTGGAGCTGAATCTCCCAAACGATATAATTCAAGACCTGCAAGTGAAAATGGATGATGGTGTGGCACTCATTGCCAATTTATCTAGGCTTAGCGTGTGGAACTGTCGCATATGGGGGGACTGTTGCAACTGCATGAAGCCTAGCTATGCAGACCAACTTGCTGCATTGGATAGGTCTCTTAGACGACTGTTGGAGATACTAAAGCTTGAGCAGATGAGGAACGTGATGGAGCTCTTGCTTTTGGCAAGGAGAAGTAATGACCGACAAGATGACTTGGAGAGAAGACAGTTGGAAATTCTGAAAGCGCTGCAAGAAACCGGGGATATGTTAAGAGCGCAGCAGGAAGTAATGGAGAGAATTGAAAGGAATGGTGCTGCATCTTCAGACAGAGGAGGGTCAGCTCCTGCTCCTGCTCTAGGAACAGTATTTAGGGTGTTGTTTGATGTTGTTATCAGAGTAAAGGTCAAGAATATGATGTATGAGCGCCTCCTCAAAGATTTTGAATCCACTCTTGAATGCTTGAAGCCACTTATAGAAGAGATGGTGGAGTCTAACAAGTTGTTGCATCTTCCAAATGAGGAACAAGAATATTTCATAATGCAAATGGAAAAGGGTGTAGAGTTAATTCACCAGTGCTCTGAGGCTTGCAAGGGAGGACTAAGGCTTTTCATTGAACTCAAAGAGCAGGTAGTAAGGAATGTGAAGGAGGCCTTGGTGCTTATAAGTAACTTGGAAAAAGAGATCGCAGAAATTGAAGGGGTTGTTGTGGTACAAAGTGATGAAATTGAGTGTTCGATTCCAGCACCTCAACCTCGATCACCTTTAGTTGGAGAGGATTTACAAAATGTGCAGATAAATCGAGTGGTGATCGATAAGACATTCGATGCAGTAAGTAACTTAGAAGAGGAGATCAAGGAAATTAGAGAAGTTAATGTGGTACAAAATGATGAAGTACAAAGTAAAGGTCCTCAACCTTCATTGCCTACAGCTGGATCCAGTGTACAAAGTATGCAGGGAACAAGGGATGTGATCAAGGAAAGATGGGACTCGGAAAAGTTGCCGGATGTCAAGCAAATTAAAGGGAAAGGCTTGTTCGAATATCCGGTTGCTGGTGAATATGACCTTCGTCCACCATTTCCAGTGGGACTTGCACTGGAACGAGAAGATCACGCTGATGCATACAGTAATGCATCATTGGAAGAACCAGTTGATGAATTGGATATGCATGTCAGCTACTTGAAACGGAAGCTTTTATATGGTGGTCACTTAGCCATTGTGCTGACGGGACCTGAAGGATGCGGGAAAACTAAATTGGCAGAAAAGTTTTGTCAAGATGAGGAAATCATAGATGAATTCAAGAACAATATTTTCTTCGTCCCTGTTTCGGAAAGCCCCAATTTGCAGCTTATTGTTCAAAAACTATATCCAGAGGAGGGCTACAGGCAAATTATGTTGCCAGATGAAAATGGAGTTCATGCAATTCAGTGGCTGCAAGCATTTGTTAAGCATGTAGGACATCGTCGTTCTCTGTTGGTCCTAGATGATGTCTGGCCTGGATCTGAATCCCTTCTTGATGAGTTTGATGAATTCAAAAGGTCAAATTTCAAGATTCTGGTGACATCAAGATTCGAATTTCCAAGATTTGGTTCCTCCTATTATGTAATGATGGATGATGTACTTAGGGTAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_jaz zf-met

Protein Analysis

620

Amino Acids

70.64

Weight (kDa)

4.99

Isoelectric Point (pI)

59.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 10 - 137 6.5e-12 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 193 - 270 4e-12 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 465 - 598 3.1e-10 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016854)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g18930
prunus_persica Prupe.5G069800_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0203321
rosa_laevigata RLG00000003535
rosa_multiflora Rmu_sc0002286.1_g000001 Rmu_sc0003582.1_g000006
rosa_roxburghii Rroxscaffold_3G00253880
rosa_rugosa Rorug07G0075500 Rorug07G0075600
rosa_samantha Rh7AG205200 Rh7BG204600 Rh7CG216400 Rh7DG211700
rosa_wichuraiana Rw7G017870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 890
Acc36I ACCTGC 2 cut(s) 213, 844
AccB7I CCANNNNNTGG 2 cut(s) 169, 1811
AciI CCGC 1 cut(s) 1467
AclWI GGATC 3 cut(s) 1155, 1168, 1732
AcsI RAATTY 5 cut(s) 462, 1520, 1754, 1768, 1799
AcuI CTGAAG 2 cut(s) 534, 1479
AfaI GTAC 5 cut(s) 939, 1107, 1122, 1170, 1845
AfeI AGCGCT 1 cut(s) 474
AfiI CCNNNNNNNGG 8 cut(s) 169, 584, 995, 1157, 1277, 1552, 1601, 1811
AjnI CCWGG 1 cut(s) 1720
AjuI GAANNNNNNNTTGG 6 cut(s) 863, 895, 1463, 1495, 1798, 1830
AluBI AGCT 9 cut(s) 175, 312, 373, 400, 569, 1157, 1401, 1417, 1573
AluI AGCT 9 cut(s) 175, 312, 373, 400, 569, 1157, 1401, 1417, 1573
Alw21I GWGCWC 3 cut(s) 34, 402, 806
Alw26I GTCTC 2 cut(s) 153, 348
AlwI GGATC 3 cut(s) 1155, 1168, 1732
AlwNI CAGNNNCTG 2 cut(s) 572, 1657
Aor51HI AGCGCT 1 cut(s) 474
AoxI GGCC 2 cut(s) 876, 1718
ApeKI GCWGC 6 cut(s) 329, 475, 505, 542, 1570, 1657
ApoI RAATTY 5 cut(s) 462, 1520, 1754, 1768, 1799
ArsI GACNNNNNNTTYG 2 cut(s) 1117, 1149
Asp700I GAANNNNTTC 1 cut(s) 1734
AspLEI GCGC 3 cut(s) 475, 505, 654
AspS9I GGNCC 3 cut(s) 1133, 1454, 1702
AsuC2I CCSGG 1 cut(s) 487
AsuHPI GGTGA 5 cut(s) 788, 978, 1045, 1292, 1795
AsuII TTCGAA 2 cut(s) 1263, 1797
AvaII GGWCC 3 cut(s) 1133, 1454, 1702
BamHI GGATCC 1 cut(s) 1160
BanII GRGCYC 1 cut(s) 402
BauI CACGAG 1 cut(s) 138
BbsI GAAGAC 1 cut(s) 457
Bbv12I GWGCWC 3 cut(s) 34, 402, 806
BbvI GCAGC 6 cut(s) 316, 462, 517, 529, 1582, 1644
BccI CCATC 6 cut(s) 47, 218, 388, 703, 1203, 1828
BcgI CGANNNNNNTGC 2 cut(s) 1007, 1041
BciT130I CCWGG 1 cut(s) 1722
BclI TGATCA 1 cut(s) 1197
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 2 cut(s) 153, 348
BfaI CTAG 5 cut(s) 122, 252, 309, 584, 1706
BfmI CTRYAG 2 cut(s) 1152, 1606
BfoI RGCGCY 2 cut(s) 476, 655
BfuAI ACCTGC 2 cut(s) 213, 844
BisI GCNGC 6 cut(s) 330, 476, 506, 543, 1571, 1658
BlpI GCTNAGC 1 cut(s) 257
BlsI GCNGC 6 cut(s) 331, 477, 507, 544, 1572, 1659
Bme1390I CCNGG 2 cut(s) 487, 1722
Bme18I GGWCC 3 cut(s) 1133, 1454, 1702
BmgT120I GGNCC 3 cut(s) 1133, 1454, 1702
BmiI GGNNCC 3 cut(s) 1162, 1455, 1816
BmrFI CCNGG 2 cut(s) 487, 1722
BmsI GCATC 6 cut(s) 554, 742, 1042, 1333, 1367, 1454
BoxI GACNNNNGTC 1 cut(s) 1293
BpiI GAAGAC 1 cut(s) 457
Bpu1102I GCTNAGC 1 cut(s) 257
Bpu14I TTCGAA 2 cut(s) 1263, 1797
BpuEI CTTGAG 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 487
Bsa29I ATCGAT 1 cut(s) 1038
BsaBI GATNNNNATC 1 cut(s) 1729
BsaI GGTCTC 2 cut(s) 153, 348
BsaJI CCNNGG 2 cut(s) 486, 879
BsaWI WCCGGW 1 cut(s) 1270
Bsc4I CCNNNNNNNGG 8 cut(s) 169, 584, 995, 1157, 1277, 1552, 1601, 1811
Bse1I ACTGG 5 cut(s) 799, 1164, 1307, 1326, 1373
Bse3DI GCAATG 2 cut(s) 237, 1145
Bse8I GATNNNNATC 1 cut(s) 1729
BseBI CCWGG 1 cut(s) 1722
BseCI ATCGAT 1 cut(s) 1038
BseDI CCNNGG 2 cut(s) 486, 879
BseGI GGATG 6 cut(s) 144, 226, 1198, 1237, 1469, 1843
BseJI GATNNNNATC 1 cut(s) 1729
BseLI CCNNNNNNNGG 8 cut(s) 169, 584, 995, 1157, 1277, 1552, 1601, 1811
BseMI GCAATG 2 cut(s) 237, 1145
BseMII CTCAG 1 cut(s) 798
BseNI ACTGG 5 cut(s) 799, 1164, 1307, 1326, 1373
BseRI GAGGAG 6 cut(s) 42, 89, 573, 647, 1088, 1613
BseXI GCAGC 6 cut(s) 316, 462, 517, 529, 1582, 1644
BsgI GTGCAG 1 cut(s) 1037
BshFI GGCC 2 cut(s) 878, 1720
BshVI ATCGAT 1 cut(s) 1038
BsiHKAI GWGCWC 3 cut(s) 34, 402, 806
BsiSI CCGG 3 cut(s) 486, 1229, 1271
BslFI GGGAC 5 cut(s) 299, 1226, 1326, 1467, 1529
BslI CCNNNNNNNGG 8 cut(s) 169, 584, 995, 1157, 1277, 1552, 1601, 1811
BsmAI GTCTC 2 cut(s) 153, 348
BsmFI GGGAC 5 cut(s) 299, 1226, 1326, 1467, 1529
BsmI GAATGC 1 cut(s) 689
BsnI GGCC 2 cut(s) 878, 1720
Bso31I GGTCTC 2 cut(s) 153, 348
Bsp119I TTCGAA 2 cut(s) 1263, 1797
Bsp1286I GDGCHC 3 cut(s) 34, 402, 806
Bsp1407I TGTACA 1 cut(s) 1168
Bsp143I GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
Bsp1720I GCTNAGC 1 cut(s) 257
BspACI CCGC 1 cut(s) 1467
BspANI GGCC 2 cut(s) 878, 1720
BspCNI CTCAG 1 cut(s) 799
BspDI ATCGAT 1 cut(s) 1038
BspLI GGNNCC 3 cut(s) 1162, 1455, 1816
BspMI ACCTGC 2 cut(s) 213, 844
BspPI GGATC 3 cut(s) 1155, 1168, 1732
BspT104I TTCGAA 2 cut(s) 1263, 1797
BspTNI GGTCTC 2 cut(s) 153, 348
BsrDI GCAATG 2 cut(s) 237, 1145
BsrGI TGTACA 1 cut(s) 1168
BsrI ACTGG 5 cut(s) 799, 1164, 1307, 1326, 1373
BssECI CCNNGG 2 cut(s) 486, 879
BssMI GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
BssSI CACGAG 1 cut(s) 138
BssT1I CCWWGG 1 cut(s) 879
Bst2BI CACGAG 1 cut(s) 138
Bst2UI CCWGG 1 cut(s) 1722
Bst4CI ACNGT 7 cut(s) 128, 272, 290, 357, 456, 592, 1352
Bst6I CTCTTC 2 cut(s) 699, 1065
BstAPI GCANNNNNTGC 1 cut(s) 239
BstAUI TGTACA 1 cut(s) 1168
BstBI TTCGAA 2 cut(s) 1263, 1797
BstC8I GCNNGC 2 cut(s) 814, 1662
BstDEI CTNAG 7 cut(s) 257, 347, 807, 827, 1066, 1435, 1847
BstENI CCTNNNNNAGG 1 cut(s) 582
BstF5I GGATG 6 cut(s) 144, 226, 1198, 1237, 1469, 1843
BstH2I RGCGCY 2 cut(s) 476, 655
BstHHI GCGC 3 cut(s) 475, 505, 654
BstKTI GATC 8 cut(s) 912, 986, 1038, 1080, 1163, 1200, 1336, 1727
BstMAI GTCTC 2 cut(s) 153, 348
BstMBI GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstNI CCWGG 1 cut(s) 1722
BstNSI RCATGY 2 cut(s) 1397, 1679
BstPAI GACNNNNGTC 1 cut(s) 1293
BstSCI CCNGG 2 cut(s) 485, 1720
BstSFI CTRYAG 2 cut(s) 1152, 1606
BstV1I GCAGC 6 cut(s) 316, 462, 517, 529, 1582, 1644
BstV2I GAAGAC 1 cut(s) 457
BstX2I RGATCY 2 cut(s) 1160, 1724
BstYI RGATCY 2 cut(s) 1160, 1724
Bsu15I ATCGAT 1 cut(s) 1038
BsuRI GGCC 2 cut(s) 878, 1720
BsuTUI ATCGAT 1 cut(s) 1038
BtsCI GGATG 6 cut(s) 144, 226, 1198, 1237, 1469, 1843
BtsIMutI CAGTG 5 cut(s) 806, 1171, 1314, 1319, 1658
BveI ACCTGC 2 cut(s) 213, 844
Cac8I GCNNGC 2 cut(s) 814, 1662
CaiI CAGNNNCTG 2 cut(s) 572, 1657
CfoI GCGC 3 cut(s) 475, 505, 654
Cfr13I GGNCC 3 cut(s) 1133, 1454, 1702
ClaI ATCGAT 1 cut(s) 1038
CseI GACGC 1 cut(s) 127
Csp6I GTAC 5 cut(s) 938, 1106, 1121, 1169, 1844
CviAII CATG 4 cut(s) 301, 1394, 1643, 1676
CviQI GTAC 5 cut(s) 938, 1106, 1121, 1169, 1844
DdeI CTNAG 7 cut(s) 257, 347, 807, 827, 1066, 1435, 1847
DpnI GATC 8 cut(s) 911, 985, 1037, 1079, 1162, 1199, 1335, 1726
DpnII GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
Eam1104I CTCTTC 2 cut(s) 699, 1065
EarI CTCTTC 2 cut(s) 699, 1065
Ecl136II GAGCTC 1 cut(s) 400
Eco130I CCWWGG 1 cut(s) 879
Eco147I AGGCCT 1 cut(s) 878
Eco24I GRGCYC 1 cut(s) 402
Eco31I GGTCTC 2 cut(s) 153, 348
Eco47I GGWCC 3 cut(s) 1133, 1454, 1702
Eco47III AGCGCT 1 cut(s) 474
Eco53kI GAGCTC 1 cut(s) 400
Eco57I CTGAAG 2 cut(s) 534, 1479
EcoICRI GAGCTC 1 cut(s) 400
EcoNI CCTNNNNNAGG 1 cut(s) 582
EcoO109I RGGNCCY 2 cut(s) 1133, 1454
EcoRI GAATTC 2 cut(s) 1520, 1754
EcoRII CCWGG 1 cut(s) 1720
EcoT14I CCWWGG 1 cut(s) 879
EcoT22I ATGCAT 3 cut(s) 1348, 1360, 1395
EcoT38I GRGCYC 1 cut(s) 402
ErhI CCWWGG 1 cut(s) 879
FaeI CATG 4 cut(s) 304, 1397, 1646, 1679
FalI AAGNNNNNCTT 2 cut(s) 863, 895
FaqI GGGAC 5 cut(s) 299, 1226, 1326, 1467, 1529
FatI CATG 4 cut(s) 300, 1393, 1642, 1675
FauI CCCGC 1 cut(s) 1460
FauNDI CATATG 1 cut(s) 278
FbaI TGATCA 1 cut(s) 1197
Fnu4HI GCNGC 6 cut(s) 330, 476, 506, 543, 1571, 1658
FokI GGATG 6 cut(s) 131, 233, 1205, 1244, 1476, 1850
FriOI GRGCYC 1 cut(s) 402
Fsp4HI GCNGC 6 cut(s) 330, 476, 506, 543, 1571, 1658
FspBI CTAG 5 cut(s) 122, 252, 309, 584, 1706
GlaI GCGC 3 cut(s) 474, 504, 653
GluI GCNGC 6 cut(s) 330, 476, 506, 543, 1571, 1658
HaeII RGCGCY 2 cut(s) 476, 655
HaeIII GGCC 2 cut(s) 878, 1720
HapII CCGG 3 cut(s) 486, 1229, 1271
HgaI GACGC 1 cut(s) 127
HhaI GCGC 3 cut(s) 475, 505, 654
Hin1II CATG 4 cut(s) 304, 1397, 1646, 1679
Hin6I GCGC 3 cut(s) 473, 503, 652
HinP1I GCGC 3 cut(s) 473, 503, 652
HindIII AAGCTT 2 cut(s) 371, 1415
HpaII CCGG 3 cut(s) 486, 1229, 1271
HphI GGTGA 5 cut(s) 788, 978, 1045, 1292, 1795
Hpy166II GTNNAC 2 cut(s) 1169, 1298
Hpy188I TCNGA 8 cut(s) 15, 468, 553, 623, 808, 1219, 1555, 1729
Hpy8I GTNNAC 2 cut(s) 1169, 1298
Hpy99I CGWCG 2 cut(s) 121, 1692
HpyAV CCTTC 6 cut(s) 865, 917, 1152, 1301, 1454, 1745
HpyCH4III ACNGT 7 cut(s) 128, 272, 290, 357, 456, 592, 1352
HpyCH4IV ACGT 1 cut(s) 390
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 7 cut(s) 257, 347, 807, 827, 1066, 1435, 1847
HpySE526I ACGT 1 cut(s) 390
Hsp92II CATG 4 cut(s) 304, 1397, 1646, 1679
HspAI GCGC 3 cut(s) 473, 503, 652
Ksp22I TGATCA 1 cut(s) 1197
Kzo9I GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
LmnI GCTCC 5 cut(s) 29, 172, 397, 574, 580
Lsp1109I GCAGC 6 cut(s) 316, 462, 517, 529, 1582, 1644
LweI GCATC 6 cut(s) 554, 742, 1042, 1333, 1367, 1454
MaeI CTAG 5 cut(s) 122, 252, 309, 584, 1706
MaeII ACGT 1 cut(s) 390
MaeIII GTNAC 4 cut(s) 893, 1061, 1430, 1783
MalI GATC 8 cut(s) 911, 985, 1037, 1079, 1162, 1199, 1335, 1726
MboI GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
MboII GAAGA 8 cut(s) 462, 540, 716, 728, 1082, 1343, 1379, 1531
MflI RGATCY 2 cut(s) 1160, 1724
MhlI GDGCHC 3 cut(s) 34, 402, 806
MlyI GAGTC 4 cut(s) 19, 150, 725, 1208
MmeI TCCRAC 3 cut(s) 339, 438, 976
Mph1103I ATGCAT 3 cut(s) 1348, 1360, 1395
MroXI GAANNNNTTC 1 cut(s) 1734
MseI TTAA 6 cut(s) 104, 497, 791, 1098, 1245, 1671
MslI CAYNNNNRTG 1 cut(s) 1341
MspA1I CMGCKG 1 cut(s) 1157
MspI CCGG 3 cut(s) 486, 1229, 1271
MspR9I CCNGG 2 cut(s) 487, 1722
Mva1269I GAATGC 1 cut(s) 689
MvaI CCWGG 1 cut(s) 1722
MwoI GCNNNNNNNGC 1 cut(s) 239
NciI CCSGG 1 cut(s) 487
NdeI CATATG 1 cut(s) 278
NdeII GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
NlaIII CATG 4 cut(s) 304, 1397, 1646, 1679
NlaIV GGNNCC 3 cut(s) 1162, 1455, 1816
NmuCI GTSAC 2 cut(s) 1430, 1783
NsiI ATGCAT 3 cut(s) 1348, 1360, 1395
NspI RCATGY 2 cut(s) 1397, 1679
NspV TTCGAA 2 cut(s) 1263, 1797
PceI AGGCCT 1 cut(s) 878
PctI GAATGC 1 cut(s) 689
PdmI GAANNNNTTC 1 cut(s) 1734
PfeI GAWTC 7 cut(s) 113, 178, 671, 964, 1730, 1777, 1794
PflFI GACNNNGTC 1 cut(s) 1686
PflMI CCANNNNNTGG 2 cut(s) 169, 1811
PkrI GCNGC 6 cut(s) 331, 477, 507, 544, 1572, 1659
PleI GAGTC 4 cut(s) 18, 149, 724, 1208
PpsI GAGTC 4 cut(s) 18, 149, 724, 1208
PpuMI RGGWCCY 2 cut(s) 1133, 1454
PshAI GACNNNNGTC 1 cut(s) 1293
PsiI TTATAA 1 cut(s) 890
Psp124BI GAGCTC 1 cut(s) 402
Psp5II RGGWCCY 2 cut(s) 1133, 1454
Psp6I CCWGG 1 cut(s) 1720
PspGI CCWGG 1 cut(s) 1720
PspN4I GGNNCC 3 cut(s) 1162, 1455, 1816
PspPI GGNCC 3 cut(s) 1133, 1454, 1702
PspPPI RGGWCCY 2 cut(s) 1133, 1454
PstNI CAGNNNCTG 2 cut(s) 572, 1657
PsuI RGATCY 2 cut(s) 1160, 1724
PsyI GACNNNGTC 1 cut(s) 1686
PvuII CAGCTG 1 cut(s) 1157
RsaI GTAC 5 cut(s) 939, 1107, 1122, 1170, 1845
RsaNI GTAC 5 cut(s) 938, 1106, 1121, 1169, 1844
RseI CAYNNNNRTG 1 cut(s) 1341
SacI GAGCTC 1 cut(s) 402
SaqAI TTAA 6 cut(s) 104, 497, 791, 1098, 1245, 1671
SatI GCNGC 6 cut(s) 330, 476, 506, 543, 1571, 1658
Sau3AI GATC 8 cut(s) 909, 983, 1035, 1077, 1160, 1197, 1333, 1724
Sau96I GGNCC 3 cut(s) 1133, 1454, 1702
SchI GAGTC 4 cut(s) 19, 150, 725, 1208
ScrFI CCNGG 2 cut(s) 487, 1722
SduI GDGCHC 3 cut(s) 34, 402, 806
SfaNI GCATC 6 cut(s) 554, 742, 1042, 1333, 1367, 1454
SfcI CTRYAG 2 cut(s) 1152, 1606
SfuI TTCGAA 2 cut(s) 1263, 1797
SinI GGWCC 3 cut(s) 1133, 1454, 1702
SmiMI CAYNNNNRTG 1 cut(s) 1341
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
SseBI AGGCCT 1 cut(s) 878
SsiI CCGC 1 cut(s) 1467
SspI AATATT 2 cut(s) 758, 1534
SspMI CTAG 5 cut(s) 122, 252, 309, 584, 1706
SstI GAGCTC 1 cut(s) 402
StuI AGGCCT 1 cut(s) 878
StyD4I CCNGG 2 cut(s) 485, 1720
StyI CCWWGG 1 cut(s) 879
TaaI ACNGT 7 cut(s) 128, 272, 290, 357, 456, 592, 1352
TaiI ACGT 1 cut(s) 393
TaqI TCGA 9 cut(s) 111, 116, 962, 982, 1027, 1038, 1050, 1263, 1797
TaqII GACCGA 1 cut(s) 444
TatI WGTACW 3 cut(s) 1120, 1168, 1843
TfiI GAWTC 7 cut(s) 113, 178, 671, 964, 1730, 1777, 1794
Tru1I TTAA 6 cut(s) 104, 497, 791, 1098, 1245, 1671
Tru9I TTAA 6 cut(s) 104, 497, 791, 1098, 1245, 1671
TscAI CASTG 5 cut(s) 806, 1171, 1314, 1326, 1658
TseFI GTSAC 2 cut(s) 1430, 1783
TseI GCWGC 6 cut(s) 329, 475, 505, 542, 1570, 1657
Tsp45I GTSAC 2 cut(s) 1430, 1783
TspGWI ACGGA 1 cut(s) 1426
TspRI CASTG 5 cut(s) 806, 1171, 1314, 1326, 1658
Tth111I GACNNNGTC 1 cut(s) 1686
Van91I CCANNNNNTGG 2 cut(s) 169, 1811
VpaK11BI GGWCC 3 cut(s) 1133, 1454, 1702
XagI CCTNNNNNAGG 1 cut(s) 582
XapI RAATTY 5 cut(s) 462, 1520, 1754, 1768, 1799
XceI RCATGY 2 cut(s) 1397, 1679
XmnI GAANNNNTTC 1 cut(s) 1734
XspI CTAG 5 cut(s) 122, 252, 309, 584, 1706
Zsp2I ATGCAT 3 cut(s) 1348, 1360, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.