C1 domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17740 AT2G28270 AT2G44370 AT2G44380 AT2G44390 AT5G40590 AT5G43520 |
| fragaria_vesca | FvH4_7g00120 |
| malus_domestica | MD07G1002100.v1.1 |
| prunus_persica | Prupe.2G003600_v2.0.a1 |
| pyrus_communis | pycom02g26720 |
| rosa_chinensis | RchiOBHm_Chr1g0313371 |
| rosa_multiflora | Rmu_sc0000035.1_g000026 |
| rosa_roxburghii | Rroxscaffold_4G00332240 |
| rosa_samantha | Rh1AG003000 Rh1BG000100 Rh1CG001500 Rh1DG003000 |
| rosa_wichuraiana | Rw1G000190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 471 |
| AciI | CCGC | 4 cut(s) | 300, 324, 415, 437 |
| AcsI | RAATTY | 2 cut(s) | 222, 463 |
| AcuI | CTGAAG | 1 cut(s) | 612 |
| AfaI | GTAC | 2 cut(s) | 477, 568 |
| AflIII | ACRYGT | 1 cut(s) | 311 |
| AgsI | TTSAA | 2 cut(s) | 373, 386 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 353, 385 |
| AluBI | AGCT | 4 cut(s) | 109, 134, 348, 596 |
| AluI | AGCT | 4 cut(s) | 109, 134, 348, 596 |
| ApeKI | GCWGC | 1 cut(s) | 156 |
| ApoI | RAATTY | 2 cut(s) | 222, 463 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 11 |
| AspLEI | GCGC | 1 cut(s) | 392 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 140, 230, 314, 338 |
| BaeGI | GKGCMC | 2 cut(s) | 44, 359 |
| BbsI | GAAGAC | 1 cut(s) | 156 |
| BbvI | GCAGC | 1 cut(s) | 168 |
| BccI | CCATC | 1 cut(s) | 579 |
| BceAI | ACGGC | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 601 |
| BfaI | CTAG | 1 cut(s) | 110 |
| BisI | GCNGC | 2 cut(s) | 157, 415 |
| BlsI | GCNGC | 2 cut(s) | 158, 416 |
| BpiI | GAAGAC | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 510 |
| BsaBI | GATNNNNATC | 2 cut(s) | 603, 606 |
| Bse118I | RCCGGY | 1 cut(s) | 21 |
| Bse3DI | GCAATG | 1 cut(s) | 577 |
| Bse8I | GATNNNNATC | 2 cut(s) | 603, 606 |
| BseJI | GATNNNNATC | 2 cut(s) | 603, 606 |
| BseMI | GCAATG | 1 cut(s) | 577 |
| BseRI | GAGGAG | 1 cut(s) | 437 |
| BseSI | GKGCMC | 2 cut(s) | 44, 359 |
| BseXI | GCAGC | 1 cut(s) | 168 |
| BsiSI | CCGG | 2 cut(s) | 22, 333 |
| Bsp1286I | GDGCHC | 2 cut(s) | 44, 359 |
| Bsp1407I | TGTACA | 1 cut(s) | 475 |
| Bsp143I | GATC | 1 cut(s) | 601 |
| BspACI | CCGC | 4 cut(s) | 300, 324, 415, 437 |
| BspHI | TCATGA | 1 cut(s) | 610 |
| BsrDI | GCAATG | 1 cut(s) | 577 |
| BsrFI | RCCGGY | 1 cut(s) | 21 |
| BsrGI | TGTACA | 1 cut(s) | 475 |
| BssAI | RCCGGY | 1 cut(s) | 21 |
| BssMI | GATC | 1 cut(s) | 601 |
| Bst4CI | ACNGT | 2 cut(s) | 61, 548 |
| Bst6I | CTCTTC | 1 cut(s) | 258 |
| BstAUI | TGTACA | 1 cut(s) | 475 |
| BstC8I | GCNNGC | 2 cut(s) | 322, 536 |
| BstHHI | GCGC | 1 cut(s) | 392 |
| BstKTI | GATC | 1 cut(s) | 604 |
| BstMBI | GATC | 1 cut(s) | 601 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 96, 354, 363 |
| BstNSI | RCATGY | 1 cut(s) | 315 |
| BstSLI | GKGCMC | 2 cut(s) | 44, 359 |
| BstV1I | GCAGC | 1 cut(s) | 168 |
| BstV2I | GAAGAC | 1 cut(s) | 156 |
| BtsIMutI | CAGTG | 2 cut(s) | 66, 359 |
| Cac8I | GCNNGC | 2 cut(s) | 322, 536 |
| CciI | TCATGA | 1 cut(s) | 610 |
| CfoI | GCGC | 1 cut(s) | 392 |
| Cfr10I | RCCGGY | 1 cut(s) | 21 |
| Csp6I | GTAC | 2 cut(s) | 476, 567 |
| CviAII | CATG | 5 cut(s) | 26, 65, 312, 380, 611 |
| CviJI | RGCY | 8 cut(s) | 18, 109, 134, 348, 414, 516, 538, 596 |
| CviKI_1 | RGCY | 8 cut(s) | 18, 109, 134, 348, 414, 516, 538, 596 |
| CviQI | GTAC | 2 cut(s) | 476, 567 |
| DpnI | GATC | 1 cut(s) | 603 |
| DpnII | GATC | 1 cut(s) | 601 |
| Eam1104I | CTCTTC | 1 cut(s) | 258 |
| EarI | CTCTTC | 1 cut(s) | 258 |
| Eco57I | CTGAAG | 1 cut(s) | 612 |
| FaeI | CATG | 5 cut(s) | 29, 68, 315, 383, 614 |
| FaiI | YATR | 8 cut(s) | 27, 66, 105, 313, 381, 471, 499, 612 |
| FatI | CATG | 5 cut(s) | 25, 64, 311, 379, 610 |
| FauI | CCCGC | 1 cut(s) | 444 |
| FbaI | TGATCA | 1 cut(s) | 601 |
| Fnu4HI | GCNGC | 2 cut(s) | 157, 415 |
| Fsp4HI | GCNGC | 2 cut(s) | 157, 415 |
| FspBI | CTAG | 1 cut(s) | 110 |
| GlaI | GCGC | 1 cut(s) | 391 |
| GluI | GCNGC | 2 cut(s) | 157, 415 |
| HapII | CCGG | 2 cut(s) | 22, 333 |
| HhaI | GCGC | 1 cut(s) | 392 |
| Hin1II | CATG | 5 cut(s) | 29, 68, 315, 383, 614 |
| Hin6I | GCGC | 1 cut(s) | 390 |
| HinP1I | GCGC | 1 cut(s) | 390 |
| HincII | GTYRAC | 1 cut(s) | 422 |
| HindII | GTYRAC | 1 cut(s) | 422 |
| HinfI | GANTC | 1 cut(s) | 329 |
| HpaII | CCGG | 2 cut(s) | 22, 333 |
| HphI | GGTGA | 5 cut(s) | 16, 140, 230, 314, 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 309, 422 |
| Hpy188III | TCNNGA | 1 cut(s) | 611 |
| Hpy8I | GTNNAC | 2 cut(s) | 309, 422 |
| Hpy99I | CGWCG | 1 cut(s) | 496 |
| HpyAV | CCTTC | 1 cut(s) | 275 |
| HpyCH4III | ACNGT | 2 cut(s) | 61, 548 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 156, 366 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 96, 354, 363 |
| Hsp92II | CATG | 5 cut(s) | 29, 68, 315, 383, 614 |
| HspAI | GCGC | 1 cut(s) | 390 |
| Ksp22I | TGATCA | 1 cut(s) | 601 |
| Kzo9I | GATC | 1 cut(s) | 601 |
| LmnI | GCTCC | 1 cut(s) | 95 |
| LpnPI | CCDG | 6 cut(s) | 35, 111, 229, 334, 346, 520 |
| Lsp1109I | GCAGC | 1 cut(s) | 168 |
| MaeI | CTAG | 1 cut(s) | 110 |
| MaeIII | GTNAC | 1 cut(s) | 500 |
| MalI | GATC | 1 cut(s) | 603 |
| MboI | GATC | 1 cut(s) | 601 |
| MboII | GAAGA | 4 cut(s) | 80, 156, 245, 248 |
| MhlI | GDGCHC | 2 cut(s) | 44, 359 |
| MluCI | AATT | 4 cut(s) | 144, 169, 222, 463 |
| MmeI | TCCRAC | 2 cut(s) | 12, 232 |
| MnlI | CCTC | 7 cut(s) | 63, 125, 200, 261, 279, 411, 458 |
| MroXI | GAANNNNTTC | 1 cut(s) | 11 |
| MslI | CAYNNNNRTG | 3 cut(s) | 24, 69, 609 |
| MspA1I | CMGCKG | 1 cut(s) | 300 |
| MspI | CCGG | 2 cut(s) | 22, 333 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 96, 354, 363 |
| NdeII | GATC | 1 cut(s) | 601 |
| NlaIII | CATG | 5 cut(s) | 29, 68, 315, 383, 614 |
| NmuCI | GTSAC | 1 cut(s) | 500 |
| NspI | RCATGY | 1 cut(s) | 315 |
| PagI | TCATGA | 1 cut(s) | 610 |
| PciI | ACATGT | 1 cut(s) | 311 |
| PdmI | GAANNNNTTC | 1 cut(s) | 11 |
| PfeI | GAWTC | 1 cut(s) | 329 |
| PkrI | GCNGC | 2 cut(s) | 158, 416 |
| PscI | ACATGT | 1 cut(s) | 311 |
| PsiI | TTATAA | 1 cut(s) | 471 |
| RsaI | GTAC | 2 cut(s) | 477, 568 |
| RsaNI | GTAC | 2 cut(s) | 476, 567 |
| RseI | CAYNNNNRTG | 3 cut(s) | 24, 69, 609 |
| SatI | GCNGC | 2 cut(s) | 157, 415 |
| Sau3AI | GATC | 1 cut(s) | 601 |
| SduI | GDGCHC | 2 cut(s) | 44, 359 |
| SetI | ASST | 8 cut(s) | 111, 117, 130, 136, 192, 350, 532, 598 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 24, 69, 609 |
| SmlI | CTYRAG | 1 cut(s) | 525 |
| SmoI | CTYRAG | 1 cut(s) | 525 |
| Sse9I | AATT | 4 cut(s) | 144, 169, 222, 463 |
| SsiI | CCGC | 4 cut(s) | 300, 324, 415, 437 |
| SspMI | CTAG | 1 cut(s) | 110 |
| TaaI | ACNGT | 2 cut(s) | 61, 548 |
| TaqI | TCGA | 1 cut(s) | 584 |
| TasI | AATT | 4 cut(s) | 144, 169, 222, 463 |
| TatI | WGTACW | 1 cut(s) | 475 |
| TauI | GCSGC | 1 cut(s) | 417 |
| TfiI | GAWTC | 1 cut(s) | 329 |
| TscAI | CASTG | 2 cut(s) | 66, 359 |
| TseFI | GTSAC | 1 cut(s) | 500 |
| TseI | GCWGC | 1 cut(s) | 156 |
| Tsp45I | GTSAC | 1 cut(s) | 500 |
| TspDTI | ATGAA | 2 cut(s) | 81, 90 |
| TspGWI | ACGGA | 2 cut(s) | 82, 445 |
| TspRI | CASTG | 2 cut(s) | 66, 359 |
| XapI | RAATTY | 2 cut(s) | 222, 463 |
| XceI | RCATGY | 1 cut(s) | 315 |
| XmnI | GAANNNNTTC | 1 cut(s) | 11 |
| XspI | CTAG | 1 cut(s) | 110 |