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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0008643.1_g000001 Rmu_sc0035374.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00387430 Rroxscaffold_7G00201790 |
| rosa_samantha | Rh1AG182300 Rh1DG120300 Rh2AG476600 Rh2CG462100 Rh2CG462200 Rh4CG061200 Rh4DG147800 Rh6AG151600 Rh6DG136300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 78 |
| AciI | CCGC | 2 cut(s) | 50, 57 |
| AcuI | CTGAAG | 1 cut(s) | 159 |
| AfaI | GTAC | 2 cut(s) | 16, 149 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 1 cut(s) | 179 |
| AluI | AGCT | 1 cut(s) | 179 |
| Alw21I | GWGCWC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AsuC2I | CCSGG | 1 cut(s) | 131 |
| Bbv12I | GWGCWC | 1 cut(s) | 87 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 26 |
| BceAI | ACGGC | 1 cut(s) | 63 |
| BcnI | CCSGG | 1 cut(s) | 131 |
| BfmI | CTRYAG | 1 cut(s) | 22 |
| BisI | GCNGC | 2 cut(s) | 51, 180 |
| BlsI | GCNGC | 2 cut(s) | 52, 181 |
| Bme1390I | CCNGG | 1 cut(s) | 131 |
| BmrFI | CCNGG | 1 cut(s) | 131 |
| BpuMI | CCSGG | 1 cut(s) | 131 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 57, 87, 110, 140 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 1 cut(s) | 87 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| Bsp1286I | GDGCHC | 1 cut(s) | 87 |
| Bsp143I | GATC | 2 cut(s) | 156, 193 |
| BspACI | CCGC | 2 cut(s) | 50, 57 |
| BssMI | GATC | 2 cut(s) | 156, 193 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstKTI | GATC | 2 cut(s) | 159, 196 |
| BstMBI | GATC | 2 cut(s) | 156, 193 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstSCI | CCNGG | 1 cut(s) | 129 |
| BstSFI | CTRYAG | 1 cut(s) | 22 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| Csp6I | GTAC | 2 cut(s) | 15, 148 |
| CviAII | CATG | 2 cut(s) | 12, 100 |
| CviJI | RGCY | 5 cut(s) | 27, 53, 104, 134, 179 |
| CviKI_1 | RGCY | 5 cut(s) | 27, 53, 104, 134, 179 |
| CviQI | GTAC | 2 cut(s) | 15, 148 |
| DpnI | GATC | 2 cut(s) | 158, 195 |
| DpnII | GATC | 2 cut(s) | 156, 193 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| Eco57I | CTGAAG | 1 cut(s) | 159 |
| FaeI | CATG | 2 cut(s) | 15, 103 |
| FaiI | YATR | 3 cut(s) | 13, 63, 101 |
| FatI | CATG | 2 cut(s) | 11, 99 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 2 cut(s) | 51, 180 |
| Fsp4HI | GCNGC | 2 cut(s) | 51, 180 |
| GluI | GCNGC | 2 cut(s) | 51, 180 |
| HapII | CCGG | 1 cut(s) | 131 |
| Hin1II | CATG | 2 cut(s) | 15, 103 |
| HincII | GTYRAC | 1 cut(s) | 79 |
| HindII | GTYRAC | 1 cut(s) | 79 |
| HinfI | GANTC | 1 cut(s) | 143 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| Hpy99I | CGWCG | 2 cut(s) | 80, 83 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| Hsp92II | CATG | 2 cut(s) | 15, 103 |
| Kzo9I | GATC | 2 cut(s) | 156, 193 |
| LpnPI | CCDG | 1 cut(s) | 144 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| MaeIII | GTNAC | 1 cut(s) | 169 |
| MalI | GATC | 2 cut(s) | 158, 195 |
| MboI | GATC | 2 cut(s) | 156, 193 |
| MboII | GAAGA | 1 cut(s) | 80 |
| MhlI | GDGCHC | 1 cut(s) | 87 |
| MluCI | AATT | 1 cut(s) | 189 |
| MlyI | GAGTC | 1 cut(s) | 137 |
| MmeI | TCCRAC | 1 cut(s) | 165 |
| MnlI | CCTC | 2 cut(s) | 64, 88 |
| MspA1I | CMGCKG | 1 cut(s) | 179 |
| MspI | CCGG | 1 cut(s) | 131 |
| MspR9I | CCNGG | 1 cut(s) | 131 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NciI | CCSGG | 1 cut(s) | 131 |
| NdeII | GATC | 2 cut(s) | 156, 193 |
| NlaIII | CATG | 2 cut(s) | 15, 103 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 152 |
| PkrI | GCNGC | 2 cut(s) | 52, 181 |
| PleI | GAGTC | 1 cut(s) | 137 |
| PpsI | GAGTC | 1 cut(s) | 137 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 37, 69 |
| PvuII | CAGCTG | 1 cut(s) | 179 |
| RsaI | GTAC | 2 cut(s) | 16, 149 |
| RsaNI | GTAC | 2 cut(s) | 15, 148 |
| SalI | GTCGAC | 1 cut(s) | 77 |
| SatI | GCNGC | 2 cut(s) | 51, 180 |
| Sau3AI | GATC | 2 cut(s) | 156, 193 |
| SchI | GAGTC | 1 cut(s) | 137 |
| ScrFI | CCNGG | 1 cut(s) | 131 |
| SduI | GDGCHC | 1 cut(s) | 87 |
| SetI | ASST | 2 cut(s) | 75, 181 |
| SfcI | CTRYAG | 1 cut(s) | 22 |
| SgeI | CNNG | 8 cut(s) | 24, 94, 112, 142, 143, 157, 177, 179 |
| SgrDI | CGTCGACG | 1 cut(s) | 77 |
| Sse9I | AATT | 1 cut(s) | 189 |
| SsiI | CCGC | 2 cut(s) | 50, 57 |
| StyD4I | CCNGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TasI | AATT | 1 cut(s) | 189 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TseI | GCWGC | 1 cut(s) | 179 |
| XmiI | GTMKAC | 1 cut(s) | 78 |