Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0008970

Physical Location & Seq

Genomic Coordinates Reverse (-)

54619422 .. 54623596

Gene Structure 4175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG429300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGATATCCATCGCCTCTAACAACAACAACTCTGTTGTTGTTGAGACGCCGGAAATTTCTCCCACTCTCATCTCCGACGTCGTTTCCACCTCTCAGACCCAACCGGAGAAGCAGCAGCCAACCACCACCACTCATCATGATCATGTCTTCAAATCCAAGCTTCCGGACCTTCCCAACATTTCCAACCACCTCCCTCTCCACACCTACTGCTTCGAGAACATCTCCGACTTCTCCGACCGACCCTGTCTCATCGTCGGCTCCACCGGAAAAACCTACACCTTCTCCGAAACCCACCTCATTTCCCAAAAGACCGGAGCCGGCCTCTCCAAGCTTGGCATCACCAAAGGCGATGTGATCATGATCCTCCTCCCAAACTGCGCCGAGTTCACCTTCGCATTCATGGGAGCTTCCATGATCGGCGCCGTCACAACCACAGCCAACCCCTTCTACACCGCCTCCGAAATCTTCAAGCAATTCAAGGCCTCCAACGCCAAGCTCATCATCACTCAATCCACATACGTAGACAAGCTCCGACACTCCGGTACCAGCTCTGATCAATACCCGATGCTCGGCGAACATTTTCAAGTGGTCACCATCGACGACCCTCCCATGAACTGCTTACATTTCTCAGTCCTCTCAGACGCCAACGAAAACGAACTTCCGGAGGTTTCCATTGATCCAGAGGACACTGTAGCGTTACCTTTCTCTTCAGGAACTACAGGACTTCCAAAAGGAGTGATTCTAACTCACAAGAGTCTGATCACAAGTGTGGCTCAGCAAGTGGACGGAGAGAATCCAAACCTGTACTTGAAGGAAGACGATGTCGTTTTGTGCGTGCTGCCATTGTTCCATATCTACTCCTTGAACAGTGTCTTGTTGTGTTCTCTCAGAGCAGGGGCGGCGGTTTTGGTAATGCACAAGTTTGAGATTGGGACGCTTTTGGAGCTCATACAGAAGTACAGAGTGTCTGTGGCGGCGGTGGTGCCACCGCTGGTGATAGCGCTGGCGAAGAATCCTATGGTGGCGGACTATGATCTCAGCTCTATTAGAGCGATCTTATCCGGAGCGGCGCCGCTGGGAAAGGAACTAGAGGAGGCGTTGAGGAGCCGTGTGCCTCAGGCGGTGTTGGGCCAGGGTTATGGGATGACAGAGGCAGGGCCGGTGCTATCAATGTGCCTGGCATTCGCAAAGCAACCGTTTCCAACGAAGTCAGGGTCATGCGGCACCGTGGTTCGAAATGCAGAGCTCAAAGTCATCGAACCCGAAACTGGTCGCTCCCTCGGCTACAACCAGCGTGGCGAGATTTGCATCCGTGGCTCTCAAATTATGAAAGGATATTTGAACGACGATGAGGCCACGGCAACCACCGTAGATGTCGAGGGATGGCTTCACACCGGCGACGTTGGCTATGTGGACGATGACGATGAGGTTTTCATCGTTGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAAGTATGTTTCATTCATATTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009653 GO:0009698 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016043 GO:0016207 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019748 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0044085 GO:0044237 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071704 GO:0071840 GO:0085029 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

500

Amino Acids

54.29

Weight (kDa)

5.2

Isoelectric Point (pI)

31.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	72 - 447	5e-94	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008970)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65060 AT1G65060
fragaria_vesca	FvH4_7g33990 FvH4_7g33990
malus_domestica	MD01G1236300.v1.1 MD07G1309000.v1.1
prunus_persica	Prupe.2G326300_v2.0.a1
pyrus_communis	pycom01g24420 pycom07g28100
rosa_chinensis	RchiOBHm_Chr1g0384231
rosa_laevigata	RLG00000026055
rosa_multiflora	Rmu_co8391797.1_g000001 Rmu_sc0011271.1_g000001
rosa_roxburghii	Rroxscaffold_4G00276820
rosa_rugosa	Rorug01G0446000
rosa_samantha	Rh1AG471500 Rh1BG429300 Rh1CG441900 Rh1DG462000 Rh6BG015700 Rh7CG464300
rosa_wichuraiana	Rw1G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	81
Acc65I	GGTACC	1 cut(s)	542
AccB1I	GGYRCC	5 cut(s)	419, 542, 982, 1069, 1223
AccBSI	CCGCTC	1 cut(s)	1067
AccI	GTMKAC	1 cut(s)	522
AccIII	TCCGGA	3 cut(s)	163, 661, 1061
AclWI	GGATC	2 cut(s)	355, 671
AcsI	RAATTY	2 cut(s)	54, 1463
AcuI	CTGAAG	1 cut(s)	693
AcyI	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
AfaI	GTAC	3 cut(s)	544, 806, 959
AfeI	AGCGCT	1 cut(s)	1002
AfiI	CCNNNNNNNGG	2 cut(s)	569, 1268
AgsI	TTSAA	8 cut(s)	151, 469, 478, 584, 811, 865, 1342, 1468
AjnI	CCWGG	2 cut(s)	1131, 1176
AleI	CACNNNNGTG	1 cut(s)	767
Alw21I	GWGCWC	3 cut(s)	948, 1248, 1458
Alw26I	GTCTC	2 cut(s)	38, 251
AlwI	GGATC	2 cut(s)	355, 671
Aor13HI	TCCGGA	3 cut(s)	163, 661, 1061
Aor51HI	AGCGCT	1 cut(s)	1002
AoxI	GGCC	5 cut(s)	319, 480, 1129, 1157, 1353
ApeKI	GCWGC	3 cut(s)	112, 115, 838
ApoI	RAATTY	2 cut(s)	54, 1463
ArsI	GACNNNNNNTTYG	2 cut(s)	1199, 1231
Asp700I	GAANNNNTTC	1 cut(s)	579
Asp718I	GGTACC	1 cut(s)	542
AspLEI	GCGC	4 cut(s)	380, 422, 1003, 1072
AspS9I	GGNCC	3 cut(s)	166, 1129, 1157
AsuHPI	GGTGA	4 cut(s)	331, 379, 583, 1006
AsuII	TTCGAA	1 cut(s)	1234
AvaII	GGWCC	1 cut(s)	166
AxyI	CCTNAGG	1 cut(s)	1116
BaeI	ACNNNNGTAYC	2 cut(s)	526, 559
BanI	GGYRCC	5 cut(s)	419, 542, 982, 1069, 1223
BanII	GRGCYC	3 cut(s)	948, 1248, 1458
BbsI	GAAGAC	2 cut(s)	139, 822
Bbv12I	GWGCWC	3 cut(s)	948, 1248, 1458
BbvI	GCAGC	3 cut(s)	124, 127, 825
BccI	CCATC	3 cut(s)	17, 602, 1377
BceAI	ACGGC	3 cut(s)	407, 1092, 1374
BciT130I	CCWGG	2 cut(s)	1133, 1178
BclI	TGATCA	4 cut(s)	139, 354, 553, 759
BcoDI	GTCTC	2 cut(s)	38, 251
BfaI	CTAG	1 cut(s)	1088
BfmI	CTRYAG	2 cut(s)	690, 717
BfoI	RGCGCY	3 cut(s)	423, 1004, 1073
BisI	GCNGC	8 cut(s)	113, 116, 839, 900, 975, 1068, 1073, 1222
BlpI	GCTNAGC	1 cut(s)	774
BlsI	GCNGC	8 cut(s)	114, 117, 840, 901, 976, 1069, 1074, 1223
Bme1390I	CCNGG	2 cut(s)	1133, 1178
Bme18I	GGWCC	1 cut(s)	166
BmgT120I	GGNCC	3 cut(s)	166, 1129, 1157
BmiI	GGNNCC	8 cut(s)	259, 316, 421, 544, 984, 1071, 1106, 1225
BmrFI	CCNGG	2 cut(s)	1133, 1178
BmsI	GCATC	3 cut(s)	345, 555, 1317
BpiI	GAAGAC	2 cut(s)	139, 822
BplI	GAGNNNNNCTC	4 cut(s)	206, 238, 306, 338
Bpu1102I	GCTNAGC	1 cut(s)	774
Bpu14I	TTCGAA	1 cut(s)	1234
BsaAI	YACGTR	1 cut(s)	520
BsaBI	GATNNNNATC	3 cut(s)	8, 359, 1307
BsaHI	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
BsaJI	CCNNGG	5 cut(s)	1132, 1227, 1279, 1312, 1356
BsaWI	WCCGGW	7 cut(s)	103, 163, 263, 311, 539, 661, 1061
BsaXI	ACNNNNNCTCC	4 cut(s)	266, 296, 440, 470
Bsc4I	CCNNNNNNNGG	2 cut(s)	569, 1268
Bse118I	RCCGGY	3 cut(s)	317, 1159, 1394
Bse1I	ACTGG	1 cut(s)	1273
Bse21I	CCTNAGG	1 cut(s)	1116
Bse8I	GATNNNNATC	3 cut(s)	8, 359, 1307
BseAI	TCCGGA	3 cut(s)	163, 661, 1061
BseBI	CCWGG	2 cut(s)	1133, 1178
BseDI	CCNNGG	5 cut(s)	1132, 1227, 1279, 1312, 1356
BseGI	GGATG	3 cut(s)	1149, 1308, 1388
BseJI	GATNNNNATC	3 cut(s)	8, 359, 1307
BseLI	CCNNNNNNNGG	2 cut(s)	569, 1268
BseMII	CTCAG	7 cut(s)	107, 642, 651, 788, 901, 1051, 1130
BseNI	ACTGG	1 cut(s)	1273
BseRI	GAGGAG	3 cut(s)	356, 1106, 1117
BseXI	GCAGC	3 cut(s)	124, 127, 825
BseYI	CCCAGC	1 cut(s)	1075
Bsh1285I	CGRYCG	1 cut(s)	238
BshFI	GGCC	5 cut(s)	321, 482, 1131, 1159, 1355
BshNI	GGYRCC	5 cut(s)	419, 542, 982, 1069, 1223
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	3 cut(s)	948, 1248, 1458
BslFI	GGGAC	1 cut(s)	946
BslI	CCNNNNNNNGG	2 cut(s)	569, 1268
BsmAI	GTCTC	2 cut(s)	38, 251
BsmBI	CGTCTC	1 cut(s)	38
BsmFI	GGGAC	1 cut(s)	946
BsmI	GAATGC	2 cut(s)	395, 1181
BsnI	GGCC	5 cut(s)	321, 482, 1131, 1159, 1355
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp1286I	GDGCHC	3 cut(s)	948, 1248, 1458
Bsp13I	TCCGGA	3 cut(s)	163, 661, 1061
Bsp143I	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
Bsp1720I	GCTNAGC	1 cut(s)	774
BspANI	GGCC	5 cut(s)	321, 482, 1131, 1159, 1355
BspCNI	CTCAG	7 cut(s)	106, 641, 650, 787, 900, 1050, 1129
BspEI	TCCGGA	3 cut(s)	163, 661, 1061
BspHI	TCATGA	2 cut(s)	136, 357
BspLI	GGNNCC	8 cut(s)	259, 316, 421, 544, 984, 1071, 1106, 1225
BspPI	GGATC	2 cut(s)	355, 671
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	5 cut(s)	419, 542, 982, 1069, 1223
BsrBI	CCGCTC	1 cut(s)	1067
BsrFI	RCCGGY	3 cut(s)	317, 1159, 1394
BsrI	ACTGG	1 cut(s)	1273
BssAI	RCCGGY	3 cut(s)	317, 1159, 1394
BssECI	CCNNGG	5 cut(s)	1132, 1227, 1279, 1312, 1356
BssMI	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
BssNI	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
Bst2UI	CCWGG	2 cut(s)	1133, 1178
Bst4CI	ACNGT	5 cut(s)	691, 869, 1197, 1228, 1369
Bst6I	CTCTTC	1 cut(s)	712
BstACI	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
BstBAI	YACGTR	1 cut(s)	520
BstBI	TTCGAA	1 cut(s)	1234
BstC8I	GCNNGC	3 cut(s)	319, 836, 1005
BstDEI	CTNAG	7 cut(s)	93, 628, 637, 774, 887, 1037, 1116
BstDSI	CCRYGG	3 cut(s)	1227, 1312, 1356
BstEII	GGTNACC	1 cut(s)	589
BstF5I	GGATG	3 cut(s)	1149, 1308, 1388
BstH2I	RGCGCY	3 cut(s)	423, 1004, 1073
BstHHI	GCGC	4 cut(s)	380, 422, 1003, 1072
BstKTI	GATC	9 cut(s)	142, 357, 363, 417, 556, 679, 762, 1036, 1056
BstMAI	GTCTC	2 cut(s)	38, 251
BstMBI	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
BstMCI	CGRYCG	1 cut(s)	238
BstMWI	GCNNNNNNNGC	7 cut(s)	488, 899, 943, 1281, 1305, 1314, 1404
BstNI	CCWGG	2 cut(s)	1133, 1178
BstPI	GGTNACC	1 cut(s)	589
BstSCI	CCNGG	2 cut(s)	1131, 1176
BstSFI	CTRYAG	2 cut(s)	690, 717
BstSNI	TACGTA	1 cut(s)	520
BstV1I	GCAGC	3 cut(s)	124, 127, 825
BstV2I	GAAGAC	2 cut(s)	139, 822
BstXI	CCANNNNNNTGG	1 cut(s)	1139
Bsu36I	CCTNAGG	1 cut(s)	1116
BsuRI	GGCC	5 cut(s)	321, 482, 1131, 1159, 1355
BtgI	CCRYGG	3 cut(s)	1227, 1312, 1356
BtgZI	GCGATG	1 cut(s)	363
BtsCI	GGATG	3 cut(s)	1149, 1308, 1388
BtsIMutI	CAGTG	2 cut(s)	687, 874
Cac8I	GCNNGC	3 cut(s)	319, 836, 1005
CciI	TCATGA	2 cut(s)	136, 357
CfoI	GCGC	4 cut(s)	380, 422, 1003, 1072
Cfr10I	RCCGGY	3 cut(s)	317, 1159, 1394
Cfr13I	GGNCC	3 cut(s)	166, 1129, 1157
CseI	GACGC	3 cut(s)	55, 650, 943
Csp6I	GTAC	3 cut(s)	543, 805, 958
CspCI	CAANNNNNGTGG	2 cut(s)	1276, 1311
CviAII	CATG	7 cut(s)	137, 143, 358, 400, 412, 610, 1218
CviQI	GTAC	3 cut(s)	543, 805, 958
DdeI	CTNAG	7 cut(s)	93, 628, 637, 774, 887, 1037, 1116
DinI	GGCGCC	2 cut(s)	421, 1071
DpnI	GATC	9 cut(s)	141, 356, 362, 416, 555, 678, 761, 1035, 1055
DpnII	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
Eam1104I	CTCTTC	1 cut(s)	712
EarI	CTCTTC	1 cut(s)	712
EciI	GGCGGA	1 cut(s)	1040
Ecl136II	GAGCTC	3 cut(s)	946, 1246, 1456
Eco105I	TACGTA	1 cut(s)	520
Eco147I	AGGCCT	1 cut(s)	482
Eco24I	GRGCYC	3 cut(s)	948, 1248, 1458
Eco32I	GATATC	1 cut(s)	6
Eco47I	GGWCC	1 cut(s)	166
Eco47III	AGCGCT	1 cut(s)	1002
Eco53kI	GAGCTC	3 cut(s)	946, 1246, 1456
Eco57I	CTGAAG	1 cut(s)	693
Eco81I	CCTNAGG	1 cut(s)	1116
Eco91I	GGTNACC	1 cut(s)	589
EcoICRI	GAGCTC	3 cut(s)	946, 1246, 1456
EcoO65I	GGTNACC	1 cut(s)	589
EcoRII	CCWGG	2 cut(s)	1131, 1176
EcoRV	GATATC	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	948, 1248, 1458
EgeI	GGCGCC	2 cut(s)	421, 1071
EheI	GGCGCC	2 cut(s)	421, 1071
Esp3I	CGTCTC	1 cut(s)	38
FaeI	CATG	7 cut(s)	140, 146, 361, 403, 415, 613, 1221
FaqI	GGGAC	1 cut(s)	946
FatI	CATG	7 cut(s)	136, 142, 357, 399, 411, 609, 1217
FbaI	TGATCA	4 cut(s)	139, 354, 553, 759
FblI	GTMKAC	1 cut(s)	522
Fnu4HI	GCNGC	8 cut(s)	113, 116, 839, 900, 975, 1068, 1073, 1222
FokI	GGATG	3 cut(s)	1156, 1295, 1395
FriOI	GRGCYC	3 cut(s)	948, 1248, 1458
Fsp4HI	GCNGC	8 cut(s)	113, 116, 839, 900, 975, 1068, 1073, 1222
FspBI	CTAG	1 cut(s)	1088
GlaI	GCGC	4 cut(s)	379, 421, 1002, 1071
GluI	GCNGC	8 cut(s)	113, 116, 839, 900, 975, 1068, 1073, 1222
GsaI	CCCAGC	1 cut(s)	1079
HaeII	RGCGCY	3 cut(s)	423, 1004, 1073
HaeIII	GGCC	5 cut(s)	321, 482, 1131, 1159, 1355
HgaI	GACGC	3 cut(s)	55, 650, 943
HhaI	GCGC	4 cut(s)	380, 422, 1003, 1072
Hin1I	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
Hin1II	CATG	7 cut(s)	140, 146, 361, 403, 415, 613, 1221
Hin6I	GCGC	4 cut(s)	378, 420, 1001, 1070
HinP1I	GCGC	4 cut(s)	378, 420, 1001, 1070
HincII	GTYRAC	1 cut(s)	1441
HindII	GTYRAC	1 cut(s)	1441
HindIII	AAGCTT	2 cut(s)	158, 329
HinfI	GANTC	4 cut(s)	739, 754, 793, 1012
HphI	GGTGA	4 cut(s)	331, 379, 583, 1006
Hpy166II	GTNNAC	5 cut(s)	387, 523, 784, 1414, 1441
Hpy188III	TCNNGA	8 cut(s)	137, 164, 214, 358, 662, 680, 711, 1062
Hpy8I	GTNNAC	5 cut(s)	387, 523, 784, 1414, 1441
Hpy99I	CGWCG	6 cut(s)	80, 83, 257, 602, 1349, 1403
HpyAV	CCTTC	5 cut(s)	179, 289, 400, 454, 805
HpyCH4III	ACNGT	5 cut(s)	691, 869, 1197, 1228, 1369
HpyCH4IV	ACGT	3 cut(s)	78, 519, 1401
HpyCH4V	TGCA	3 cut(s)	916, 1241, 1308
HpyF10VI	GCNNNNNNNGC	7 cut(s)	488, 899, 943, 1281, 1305, 1314, 1404
HpyF3I	CTNAG	7 cut(s)	93, 628, 637, 774, 887, 1037, 1116
HpySE526I	ACGT	3 cut(s)	78, 519, 1401
Hsp92I	GRCGYC	5 cut(s)	47, 78, 420, 642, 1070
Hsp92II	CATG	7 cut(s)	140, 146, 361, 403, 415, 613, 1221
HspAI	GCGC	4 cut(s)	378, 420, 1001, 1070
KasI	GGCGCC	2 cut(s)	419, 1069
Kpn2I	TCCGGA	3 cut(s)	163, 661, 1061
KpnI	GGTACC	1 cut(s)	546
KroI	GCCGGC	1 cut(s)	317
KroNI	GCCGGC	1 cut(s)	319
Ksp22I	TGATCA	4 cut(s)	139, 354, 553, 759
Kzo9I	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
LmnI	GCTCC	9 cut(s)	263, 314, 404, 534, 943, 1064, 1104, 1280, 1453
Lsp1109I	GCAGC	3 cut(s)	124, 127, 825
LweI	GCATC	3 cut(s)	345, 555, 1317
MaeI	CTAG	1 cut(s)	1088
MaeII	ACGT	3 cut(s)	78, 519, 1401
MaeIII	GTNAC	3 cut(s)	424, 589, 696
MalI	GATC	9 cut(s)	141, 356, 362, 416, 555, 678, 761, 1035, 1055
MbiI	CCGCTC	1 cut(s)	1067
MboI	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
MboII	GAAGA	5 cut(s)	139, 457, 699, 827, 1021
MhlI	GDGCHC	3 cut(s)	948, 1248, 1458
MluCI	AATT	4 cut(s)	54, 473, 1323, 1463
Mly113I	GGCGCC	2 cut(s)	420, 1070
MlyI	GAGTC	1 cut(s)	763
MmeI	TCCRAC	7 cut(s)	99, 207, 249, 258, 510, 556, 1226
MroI	TCCGGA	3 cut(s)	163, 661, 1061
MroNI	GCCGGC	1 cut(s)	317
MroXI	GAANNNNTTC	1 cut(s)	579
MseI	TTAA	1 cut(s)	1449
MslI	CAYNNNNRTG	2 cut(s)	141, 767
MspA1I	CMGCKG	2 cut(s)	991, 1075
MspR9I	CCNGG	2 cut(s)	1133, 1178
Mva1269I	GAATGC	2 cut(s)	395, 1181
MvaI	CCWGG	2 cut(s)	1133, 1178
MwoI	GCNNNNNNNGC	7 cut(s)	488, 899, 943, 1281, 1305, 1314, 1404
NaeI	GCCGGC	1 cut(s)	319
NarI	GGCGCC	2 cut(s)	420, 1070
NdeII	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
NgoMIV	GCCGGC	1 cut(s)	317
NlaIII	CATG	7 cut(s)	140, 146, 361, 403, 415, 613, 1221
NlaIV	GGNNCC	8 cut(s)	259, 316, 421, 544, 984, 1071, 1106, 1225
NmeAIII	GCCGAG	3 cut(s)	406, 549, 1260
NmuCI	GTSAC	2 cut(s)	424, 589
NspV	TTCGAA	1 cut(s)	1234
OliI	CACNNNNGTG	1 cut(s)	767
PagI	TCATGA	2 cut(s)	136, 357
PceI	AGGCCT	1 cut(s)	482
PcsI	WCGNNNNNNNCGW	1 cut(s)	831
PctI	GAATGC	2 cut(s)	395, 1181
PdiI	GCCGGC	1 cut(s)	319
PdmI	GAANNNNTTC	1 cut(s)	579
PfeI	GAWTC	3 cut(s)	739, 793, 1012
PflFI	GACNNNGTC	2 cut(s)	243, 821
PkrI	GCNGC	8 cut(s)	114, 117, 840, 901, 976, 1069, 1074, 1223
PleI	GAGTC	1 cut(s)	762
PluTI	GGCGCC	2 cut(s)	423, 1073
PpsI	GAGTC	1 cut(s)	762
Ppu21I	YACGTR	1 cut(s)	520
Psp124BI	GAGCTC	3 cut(s)	948, 1248, 1458
Psp6I	CCWGG	2 cut(s)	1131, 1176
PspEI	GGTNACC	1 cut(s)	589
PspFI	CCCAGC	1 cut(s)	1075
PspGI	CCWGG	2 cut(s)	1131, 1176
PspN4I	GGNNCC	8 cut(s)	259, 316, 421, 544, 984, 1071, 1106, 1225
PspPI	GGNCC	3 cut(s)	166, 1129, 1157
PsyI	GACNNNGTC	2 cut(s)	243, 821
RsaI	GTAC	3 cut(s)	544, 806, 959
RsaNI	GTAC	3 cut(s)	543, 805, 958
RseI	CAYNNNNRTG	2 cut(s)	141, 767
SacI	GAGCTC	3 cut(s)	948, 1248, 1458
SaqAI	TTAA	1 cut(s)	1449
SatI	GCNGC	8 cut(s)	113, 116, 839, 900, 975, 1068, 1073, 1222
Sau3AI	GATC	9 cut(s)	139, 354, 360, 414, 553, 676, 759, 1033, 1053
Sau96I	GGNCC	3 cut(s)	166, 1129, 1157
SchI	GAGTC	1 cut(s)	763
ScrFI	CCNGG	2 cut(s)	1133, 1178
SduI	GDGCHC	3 cut(s)	948, 1248, 1458
SfaNI	GCATC	3 cut(s)	345, 555, 1317
SfcI	CTRYAG	2 cut(s)	690, 717
SfoI	GGCGCC	2 cut(s)	421, 1071
SfuI	TTCGAA	1 cut(s)	1234
SgrAI	CRCCGGYG	1 cut(s)	1394
SinI	GGWCC	1 cut(s)	166
SmiMI	CAYNNNNRTG	2 cut(s)	141, 767
SnaBI	TACGTA	1 cut(s)	520
Sse9I	AATT	4 cut(s)	54, 473, 1323, 1463
SseBI	AGGCCT	1 cut(s)	482
SspDI	GGCGCC	2 cut(s)	419, 1069
SspMI	CTAG	1 cut(s)	1088
SstI	GAGCTC	3 cut(s)	948, 1248, 1458
StuI	AGGCCT	1 cut(s)	482
StyD4I	CCNGG	2 cut(s)	1131, 1176
TaaI	ACNGT	5 cut(s)	691, 869, 1197, 1228, 1369
TaiI	ACGT	3 cut(s)	81, 522, 1404
TaqI	TCGA	5 cut(s)	213, 597, 1234, 1257, 1377
TaqII	GACCGA	1 cut(s)	252
TasI	AATT	4 cut(s)	54, 473, 1323, 1463
TatI	WGTACW	2 cut(s)	804, 957
TauI	GCSGC	5 cut(s)	902, 977, 1070, 1075, 1224
TfiI	GAWTC	3 cut(s)	739, 793, 1012
Tru1I	TTAA	1 cut(s)	1449
Tru9I	TTAA	1 cut(s)	1449
TscAI	CASTG	2 cut(s)	694, 874
TseFI	GTSAC	2 cut(s)	424, 589
TseI	GCWGC	3 cut(s)	112, 115, 838
Tsp45I	GTSAC	2 cut(s)	424, 589
TspDTI	ATGAA	6 cut(s)	388, 626, 1343, 1423, 1477, 1481
TspGWI	ACGGA	2 cut(s)	801, 1301
TspRI	CASTG	2 cut(s)	694, 874
Tth111I	GACNNNGTC	2 cut(s)	243, 821
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	2 cut(s)	54, 1463
XmiI	GTMKAC	1 cut(s)	522
XmnI	GAANNNNTTC	1 cut(s)	579
XspI	CTAG	1 cut(s)	1088
ZraI	GACGTC	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.