Rh1DG072200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
13082913 .. 13083835
923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG072200.1

Sequence Viewer

Length: 147 bp
ATGTTTTGGTGGTTCGGGTACCGGCAAAGCCGCTGTCCTCCTTGGTCATCCTTTGCTTCTGGGTTCGTCGCCAACCTCCTGGAGCAGGGATTCGCATCTGGTGGAGCTCGATTCCTTGAGTGGGTTGAATTGGGAGACTGCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

48

Amino Acids

5.48

Weight (kDa)

4.87

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 18
AccB1I GGYRCC 1 cut(s) 18
AciI CCGC 1 cut(s) 31
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 2 cut(s) 85, 121
AgsI TTSAA 1 cut(s) 128
AjnI CCWGG 1 cut(s) 78
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 1 cut(s) 129
ArsI GACNNNNNNTTYG 2 cut(s) 19, 51
Asp718I GGTACC 1 cut(s) 18
BanI GGYRCC 1 cut(s) 18
BanII GRGCYC 1 cut(s) 109
Bbv12I GWGCWC 1 cut(s) 109
BciT130I CCWGG 1 cut(s) 80
BcoDI GTCTC 1 cut(s) 129
BfmI CTRYAG 1 cut(s) 139
BisI GCNGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 32
Bme1390I CCNGG 1 cut(s) 80
BmiI GGNNCC 1 cut(s) 20
BmrFI CCNGG 1 cut(s) 80
BmsI GCATC 1 cut(s) 104
BpmI CTGGAG 1 cut(s) 101
BpuEI CTTGAG 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 41
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 121
Bse118I RCCGGY 1 cut(s) 21
Bse8I GATNNNNATC 1 cut(s) 94
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 1 cut(s) 41
BseGI GGATG 1 cut(s) 47
BseJI GATNNNNATC 1 cut(s) 94
BseLI CCNNNNNNNGG 2 cut(s) 85, 121
BshNI GGYRCC 1 cut(s) 18
BsiHKAI GWGCWC 1 cut(s) 109
BsiSI CCGG 1 cut(s) 22
BslI CCNNNNNNNGG 2 cut(s) 85, 121
BsmAI GTCTC 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 109
BspACI CCGC 1 cut(s) 31
BspLI GGNNCC 1 cut(s) 20
BspMAI CTGCAG 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 18
BsrFI RCCGGY 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 41
BssT1I CCWWGG 1 cut(s) 41
Bst2UI CCWGG 1 cut(s) 80
BstENI CCTNNNNNAGG 1 cut(s) 83
BstF5I GGATG 1 cut(s) 47
BstMAI GTCTC 1 cut(s) 129
BstNI CCWGG 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 78
BstSFI CTRYAG 1 cut(s) 139
BstXI CCANNNNNNTGG 1 cut(s) 79
BtsCI GGATG 1 cut(s) 47
Cfr10I RCCGGY 1 cut(s) 21
Csp6I GTAC 1 cut(s) 19
CviJI RGCY 2 cut(s) 30, 107
CviKI_1 RGCY 2 cut(s) 30, 107
CviQI GTAC 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 107
Eco130I CCWWGG 1 cut(s) 41
Eco24I GRGCYC 1 cut(s) 109
Eco53kI GAGCTC 1 cut(s) 107
EcoICRI GAGCTC 1 cut(s) 107
EcoNI CCTNNNNNAGG 1 cut(s) 83
EcoRII CCWGG 1 cut(s) 78
EcoT14I CCWWGG 1 cut(s) 41
EcoT38I GRGCYC 1 cut(s) 109
ErhI CCWWGG 1 cut(s) 41
Fnu4HI GCNGC 1 cut(s) 31
FokI GGATG 1 cut(s) 34
FriOI GRGCYC 1 cut(s) 109
Fsp4HI GCNGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 31
GsuI CTGGAG 1 cut(s) 101
HapII CCGG 1 cut(s) 22
HinfI GANTC 2 cut(s) 90, 111
HpaII CCGG 1 cut(s) 22
Hpy99I CGWCG 1 cut(s) 71
HpyCH4V TGCA 1 cut(s) 141
KpnI GGTACC 1 cut(s) 22
LmnI GCTCC 2 cut(s) 82, 104
LpnPI CCDG 6 cut(s) 35, 45, 65, 71, 84, 92
LweI GCATC 1 cut(s) 104
MhlI GDGCHC 1 cut(s) 109
MluCI AATT 1 cut(s) 128
MnlI CCTC 2 cut(s) 48, 86
MspA1I CMGCKG 1 cut(s) 33
MspI CCGG 1 cut(s) 22
MspR9I CCNGG 1 cut(s) 80
MvaI CCWGG 1 cut(s) 80
NlaIV GGNNCC 1 cut(s) 20
PfeI GAWTC 2 cut(s) 90, 111
PfoI TCCNGGA 1 cut(s) 78
PkrI GCNGC 1 cut(s) 32
Psp124BI GAGCTC 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 78
PspGI CCWGG 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 20
PstI CTGCAG 1 cut(s) 143
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
SacI GAGCTC 1 cut(s) 109
SatI GCNGC 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 80
SduI GDGCHC 1 cut(s) 109
SetI ASST 2 cut(s) 78, 109
SfaNI GCATC 1 cut(s) 104
SfcI CTRYAG 1 cut(s) 139
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 1 cut(s) 128
SsiI CCGC 1 cut(s) 31
SstI GAGCTC 1 cut(s) 109
StyD4I CCNGG 1 cut(s) 78
StyI CCWWGG 1 cut(s) 41
TaqI TCGA 1 cut(s) 109
TasI AATT 1 cut(s) 128
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 2 cut(s) 90, 111
XagI CCTNNNNNAGG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.