Rh1DG131300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
27435271 .. 27435474
204 bp
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UTR
Exon/CDS
Intron
Rh1DG131300.1

Sequence Viewer

Length: 204 bp
ATGGGAGAGATTGGTGTATATGGTCTTGGCTTTGAAGCTCTGCTGCCAAGCAAGAATCAAGCAGAGAAGAGCAGTTTCCCTGTTCCGGTGGAGAATGAAGGTACAGATGCTGCCGTAGATGTAACCGGCAAGAAGAGAAAGCAAATCCCAGCTGGCTGGCGGGGACGAGGCAGATGCAACCGGCACCTGGCAGAAGTGACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.23

Weight (kDa)

8.98

Isoelectric Point (pI)

32.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 183
AciI CCGC 1 cut(s) 160
AfaI GTAC 1 cut(s) 103
AfiI CCNNNNNNNGG 2 cut(s) 85, 187
AgsI TTSAA 1 cut(s) 35
AjnI CCWGG 1 cut(s) 186
AluBI AGCT 2 cut(s) 38, 152
AluI AGCT 2 cut(s) 38, 152
AlwNI CAGNNNCTG 1 cut(s) 110
ApeKI GCWGC 2 cut(s) 43, 110
BanI GGYRCC 1 cut(s) 183
BbvI GCAGC 2 cut(s) 30, 97
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 156, 190
BciT130I CCWGG 1 cut(s) 188
BisI GCNGC 2 cut(s) 44, 111
BlsI GCNGC 2 cut(s) 45, 112
Bme1390I CCNGG 1 cut(s) 188
BmiI GGNNCC 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 188
BmsI GCATC 2 cut(s) 97, 164
BsaWI WCCGGW 1 cut(s) 85
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 187
Bse118I RCCGGY 2 cut(s) 125, 180
BseBI CCWGG 1 cut(s) 188
BseLI CCNNNNNNNGG 2 cut(s) 85, 187
BseXI GCAGC 2 cut(s) 30, 97
BseYI CCCAGC 1 cut(s) 148
BshNI GGYRCC 1 cut(s) 183
BsiSI CCGG 3 cut(s) 86, 126, 181
BslFI GGGAC 1 cut(s) 177
BslI CCNNNNNNNGG 2 cut(s) 85, 187
BsmFI GGGAC 1 cut(s) 177
BspACI CCGC 1 cut(s) 160
BspLI GGNNCC 1 cut(s) 185
BspQI GCTCTTC 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 183
BsrFI RCCGGY 2 cut(s) 125, 180
BssAI RCCGGY 2 cut(s) 125, 180
Bst2UI CCWGG 1 cut(s) 188
Bst6I CTCTTC 2 cut(s) 62, 128
BstC8I GCNNGC 2 cut(s) 154, 158
BstNI CCWGG 1 cut(s) 188
BstSCI CCNGG 1 cut(s) 186
BstV1I GCAGC 2 cut(s) 30, 97
BstXI CCANNNNNNTGG 1 cut(s) 156
Cac8I GCNNGC 2 cut(s) 154, 158
CaiI CAGNNNCTG 1 cut(s) 110
Cfr10I RCCGGY 2 cut(s) 125, 180
Csp6I GTAC 1 cut(s) 102
CviJI RGCY 4 cut(s) 30, 38, 152, 156
CviKI_1 RGCY 4 cut(s) 30, 38, 152, 156
CviQI GTAC 1 cut(s) 102
Eam1104I CTCTTC 2 cut(s) 62, 128
EarI CTCTTC 2 cut(s) 62, 128
EcoRII CCWGG 1 cut(s) 186
FaiI YATR 2 cut(s) 19, 21
FaqI GGGAC 1 cut(s) 177
FauI CCCGC 1 cut(s) 153
Fnu4HI GCNGC 2 cut(s) 44, 111
Fsp4HI GCNGC 2 cut(s) 44, 111
GluI GCNGC 2 cut(s) 44, 111
GsaI CCCAGC 1 cut(s) 152
HapII CCGG 3 cut(s) 86, 126, 181
HinfI GANTC 1 cut(s) 55
HpaII CCGG 3 cut(s) 86, 126, 181
HpyAV CCTTC 1 cut(s) 92
HpyCH4V TGCA 1 cut(s) 177
LguI GCTCTTC 1 cut(s) 62
LpnPI CCDG 9 cut(s) 93, 99, 138, 139, 142, 162, 173, 194, 200
Lsp1109I GCAGC 2 cut(s) 30, 97
LweI GCATC 2 cut(s) 97, 164
MaeIII GTNAC 2 cut(s) 121, 196
MboII GAAGA 2 cut(s) 79, 145
MnlI CCTC 1 cut(s) 161
MspA1I CMGCKG 1 cut(s) 152
MspI CCGG 3 cut(s) 86, 126, 181
MspR9I CCNGG 1 cut(s) 188
MvaI CCWGG 1 cut(s) 188
NlaIV GGNNCC 1 cut(s) 185
NmuCI GTSAC 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 62
PfeI GAWTC 1 cut(s) 55
PkrI GCNGC 2 cut(s) 45, 112
Psp6I CCWGG 1 cut(s) 186
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 1 cut(s) 186
PspN4I GGNNCC 1 cut(s) 185
PstNI CAGNNNCTG 1 cut(s) 110
PvuII CAGCTG 1 cut(s) 152
RsaI GTAC 1 cut(s) 103
RsaNI GTAC 1 cut(s) 102
SapI GCTCTTC 1 cut(s) 62
SatI GCNGC 2 cut(s) 44, 111
ScrFI CCNGG 1 cut(s) 188
SetI ASST 5 cut(s) 40, 103, 154, 189, 203
SfaNI GCATC 2 cut(s) 97, 164
SsiI CCGC 1 cut(s) 160
StyD4I CCNGG 1 cut(s) 186
TfiI GAWTC 1 cut(s) 55
TseFI GTSAC 1 cut(s) 196
TseI GCWGC 2 cut(s) 43, 110
Tsp45I GTSAC 1 cut(s) 196
TspDTI ATGAA 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.