WD repeat-containing
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD13G1232800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0493471 RchiOBHm_Chr5g0059031 |
| rosa_laevigata | RLG00000002039 |
| rosa_multiflora | Rmu_sc0009682.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00023510 |
| rosa_rugosa | Rorug05G0220100 |
| rosa_samantha | Rh1AG220100 Rh2AG015800 Rh3BG140000 Rh3CG141700 Rh3CG150100 Rh4AG021900 Rh5BG396800 Rh6BG295100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 83 |
| AarI | CACCTGC | 1 cut(s) | 214 |
| Acc36I | ACCTGC | 1 cut(s) | 214 |
| AclWI | GGATC | 1 cut(s) | 136 |
| AgsI | TTSAA | 3 cut(s) | 10, 260, 305 |
| AjnI | CCWGG | 1 cut(s) | 250 |
| AlwI | GGATC | 1 cut(s) | 136 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 180 |
| BbsI | GAAGAC | 1 cut(s) | 310 |
| BccI | CCATC | 1 cut(s) | 47 |
| BciT130I | CCWGG | 1 cut(s) | 252 |
| BfmI | CTRYAG | 3 cut(s) | 192, 210, 322 |
| BfuAI | ACCTGC | 1 cut(s) | 214 |
| Bme1390I | CCNGG | 1 cut(s) | 252 |
| BmrFI | CCNGG | 1 cut(s) | 252 |
| BmsI | GCATC | 2 cut(s) | 236, 268 |
| BpiI | GAAGAC | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 1 cut(s) | 250 |
| BseBI | CCWGG | 1 cut(s) | 252 |
| BseDI | CCNNGG | 1 cut(s) | 250 |
| BseGI | GGATG | 1 cut(s) | 251 |
| BseMII | CTCAG | 1 cut(s) | 351 |
| BsgI | GTGCAG | 1 cut(s) | 78 |
| Bsp143I | GATC | 2 cut(s) | 88, 141 |
| BspCNI | CTCAG | 1 cut(s) | 352 |
| BspMAI | CTGCAG | 1 cut(s) | 326 |
| BspMI | ACCTGC | 1 cut(s) | 214 |
| BspPI | GGATC | 1 cut(s) | 136 |
| BssECI | CCNNGG | 1 cut(s) | 250 |
| BssMI | GATC | 2 cut(s) | 88, 141 |
| Bst2UI | CCWGG | 1 cut(s) | 252 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 2 cut(s) | 61, 132 |
| BstDEI | CTNAG | 2 cut(s) | 333, 360 |
| BstF5I | GGATG | 1 cut(s) | 251 |
| BstKTI | GATC | 2 cut(s) | 91, 144 |
| BstMBI | GATC | 2 cut(s) | 88, 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 305 |
| BstNI | CCWGG | 1 cut(s) | 252 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 250 |
| BstSFI | CTRYAG | 3 cut(s) | 192, 210, 322 |
| BstV2I | GAAGAC | 1 cut(s) | 310 |
| BstX2I | RGATCY | 1 cut(s) | 141 |
| BstYI | RGATCY | 1 cut(s) | 141 |
| BtsCI | GGATG | 1 cut(s) | 251 |
| BveI | ACCTGC | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 2 cut(s) | 61, 132 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 3 cut(s) | 134, 299, 359 |
| CviKI_1 | RGCY | 3 cut(s) | 134, 299, 359 |
| DdeI | CTNAG | 2 cut(s) | 333, 360 |
| DpnI | GATC | 2 cut(s) | 90, 143 |
| DpnII | GATC | 2 cut(s) | 88, 141 |
| EcoRII | CCWGG | 1 cut(s) | 250 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 5 cut(s) | 83, 114, 212, 228, 272 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 165, 197 |
| FatI | CATG | 1 cut(s) | 112 |
| FokI | GGATG | 1 cut(s) | 258 |
| Hin1II | CATG | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 290 |
| Hpy166II | GTNNAC | 2 cut(s) | 23, 345 |
| Hpy188I | TCNGA | 2 cut(s) | 146, 340 |
| Hpy8I | GTNNAC | 2 cut(s) | 23, 345 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 2 cut(s) | 19, 118 |
| HpyCH4V | TGCA | 5 cut(s) | 59, 110, 116, 167, 324 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 305 |
| HpyF3I | CTNAG | 2 cut(s) | 333, 360 |
| HpySE526I | ACGT | 2 cut(s) | 19, 118 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Kzo9I | GATC | 2 cut(s) | 88, 141 |
| LpnPI | CCDG | 7 cut(s) | 45, 90, 116, 219, 237, 264, 288 |
| LweI | GCATC | 2 cut(s) | 236, 268 |
| MaeII | ACGT | 2 cut(s) | 19, 118 |
| MaeIII | GTNAC | 2 cut(s) | 119, 160 |
| MalI | GATC | 2 cut(s) | 90, 143 |
| MboI | GATC | 2 cut(s) | 88, 141 |
| MboII | GAAGA | 2 cut(s) | 185, 310 |
| MflI | RGATCY | 1 cut(s) | 141 |
| MluCI | AATT | 4 cut(s) | 98, 147, 176, 240 |
| MlyI | GAGTC | 1 cut(s) | 299 |
| MnlI | CCTC | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 1 cut(s) | 180 |
| MseI | TTAA | 2 cut(s) | 351, 370 |
| MspR9I | CCNGG | 1 cut(s) | 252 |
| MvaI | CCWGG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 305 |
| NdeII | GATC | 2 cut(s) | 88, 141 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PaqCI | CACCTGC | 1 cut(s) | 214 |
| PdmI | GAANNNNTTC | 1 cut(s) | 180 |
| PleI | GAGTC | 1 cut(s) | 298 |
| PpsI | GAGTC | 1 cut(s) | 298 |
| PsiI | TTATAA | 1 cut(s) | 83 |
| Psp6I | CCWGG | 1 cut(s) | 250 |
| PspGI | CCWGG | 1 cut(s) | 250 |
| PstI | CTGCAG | 1 cut(s) | 326 |
| PsuI | RGATCY | 1 cut(s) | 141 |
| SaqAI | TTAA | 2 cut(s) | 351, 370 |
| Sau3AI | GATC | 2 cut(s) | 88, 141 |
| SchI | GAGTC | 1 cut(s) | 299 |
| ScrFI | CCNGG | 1 cut(s) | 252 |
| SetI | ASST | 5 cut(s) | 22, 121, 208, 277, 314 |
| SfaNI | GCATC | 2 cut(s) | 236, 268 |
| SfcI | CTRYAG | 3 cut(s) | 192, 210, 322 |
| Sse9I | AATT | 4 cut(s) | 98, 147, 176, 240 |
| StyD4I | CCNGG | 1 cut(s) | 250 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaiI | ACGT | 2 cut(s) | 22, 121 |
| TaqI | TCGA | 1 cut(s) | 293 |
| TasI | AATT | 4 cut(s) | 98, 147, 176, 240 |
| Tru1I | TTAA | 2 cut(s) | 351, 370 |
| Tru9I | TTAA | 2 cut(s) | 351, 370 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XmnI | GAANNNNTTC | 1 cut(s) | 180 |