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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1092100.v1.1 MD06G1092300.v1.1 |
| pyrus_communis | pycom10g15780 |
| rosa_chinensis | RchiOBHm_Chr4g0423021 |
| rosa_laevigata | RLG00000033203 |
| rosa_multiflora | Rmu_sc0002081.1_g000012 Rmu_sc0006774.1_g000013 |
| rosa_rugosa | Rorug07G0146600 |
| rosa_samantha | Rh1CG097600 Rh2AG167000 Rh2BG383200 Rh2CG172700 Rh4BG253000 Rh5AG146500 Rh6AG348000 Rh6CG120600 Rh7DG247300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 281 |
| AcsI | RAATTY | 1 cut(s) | 102 |
| AfaI | GTAC | 1 cut(s) | 126 |
| AgsI | TTSAA | 1 cut(s) | 15 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 149, 181 |
| AluBI | AGCT | 3 cut(s) | 28, 185, 314 |
| AluI | AGCT | 3 cut(s) | 28, 185, 314 |
| Alw26I | GTCTC | 1 cut(s) | 119 |
| AlwI | GGATC | 1 cut(s) | 281 |
| AoxI | GGCC | 1 cut(s) | 281 |
| ApoI | RAATTY | 1 cut(s) | 102 |
| AspS9I | GGNCC | 2 cut(s) | 145, 281 |
| AsuHPI | GGTGA | 2 cut(s) | 23, 97 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BccI | CCATC | 2 cut(s) | 42, 63 |
| BcoDI | GTCTC | 1 cut(s) | 119 |
| BfaI | CTAG | 1 cut(s) | 355 |
| BfmI | CTRYAG | 1 cut(s) | 175 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 2 cut(s) | 145, 281 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| BsaBI | GATNNNNATC | 1 cut(s) | 15 |
| Bse1I | ACTGG | 1 cut(s) | 310 |
| Bse8I | GATNNNNATC | 1 cut(s) | 15 |
| BseGI | GGATG | 2 cut(s) | 55, 349 |
| BseJI | GATNNNNATC | 1 cut(s) | 15 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BseNI | ACTGG | 1 cut(s) | 310 |
| BshFI | GGCC | 1 cut(s) | 283 |
| BsmAI | GTCTC | 1 cut(s) | 119 |
| BsnI | GGCC | 1 cut(s) | 283 |
| Bsp143I | GATC | 1 cut(s) | 273 |
| BspANI | GGCC | 1 cut(s) | 283 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspPI | GGATC | 1 cut(s) | 281 |
| BsrI | ACTGG | 1 cut(s) | 310 |
| BssMI | GATC | 1 cut(s) | 273 |
| Bst6I | CTCTTC | 1 cut(s) | 331 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstEII | GGTNACC | 1 cut(s) | 85 |
| BstF5I | GGATG | 2 cut(s) | 55, 349 |
| BstKTI | GATC | 1 cut(s) | 276 |
| BstMAI | GTCTC | 1 cut(s) | 119 |
| BstMBI | GATC | 1 cut(s) | 273 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 191 |
| BstPI | GGTNACC | 1 cut(s) | 85 |
| BstSFI | CTRYAG | 1 cut(s) | 175 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 305 |
| BsuRI | GGCC | 1 cut(s) | 283 |
| BtsCI | GGATG | 2 cut(s) | 55, 349 |
| Cfr13I | GGNCC | 2 cut(s) | 145, 281 |
| Csp6I | GTAC | 1 cut(s) | 125 |
| CviJI | RGCY | 7 cut(s) | 28, 174, 185, 239, 247, 283, 314 |
| CviKI_1 | RGCY | 7 cut(s) | 28, 174, 185, 239, 247, 283, 314 |
| CviQI | GTAC | 1 cut(s) | 125 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 1 cut(s) | 275 |
| DpnII | GATC | 1 cut(s) | 273 |
| DraI | TTTAAA | 1 cut(s) | 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 331 |
| EarI | CTCTTC | 1 cut(s) | 331 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco91I | GGTNACC | 1 cut(s) | 85 |
| EcoO109I | RGGNCCY | 1 cut(s) | 281 |
| EcoO65I | GGTNACC | 1 cut(s) | 85 |
| FaiI | YATR | 2 cut(s) | 177, 219 |
| FokI | GGATG | 1 cut(s) | 42 |
| FspBI | CTAG | 1 cut(s) | 355 |
| HaeIII | GGCC | 1 cut(s) | 283 |
| HindIII | AAGCTT | 2 cut(s) | 26, 183 |
| HinfI | GANTC | 2 cut(s) | 11, 47 |
| HphI | GGTGA | 2 cut(s) | 23, 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 1 cut(s) | 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 233 |
| HpyAV | CCTTC | 1 cut(s) | 164 |
| HpyCH4V | TGCA | 1 cut(s) | 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 191 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Kzo9I | GATC | 1 cut(s) | 273 |
| LpnPI | CCDG | 7 cut(s) | 19, 78, 84, 107, 221, 241, 291 |
| MaeI | CTAG | 1 cut(s) | 355 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MalI | GATC | 1 cut(s) | 275 |
| MboI | GATC | 1 cut(s) | 273 |
| MboII | GAAGA | 3 cut(s) | 342, 345, 348 |
| MfeI | CAATTG | 1 cut(s) | 149 |
| MluCI | AATT | 2 cut(s) | 102, 149 |
| MnlI | CCTC | 2 cut(s) | 136, 334 |
| MseI | TTAA | 2 cut(s) | 188, 291 |
| MunI | CAATTG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 191 |
| NdeII | GATC | 1 cut(s) | 273 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NmuCI | GTSAC | 1 cut(s) | 85 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 136 |
| PfeI | GAWTC | 2 cut(s) | 11, 47 |
| PspEI | GGTNACC | 1 cut(s) | 85 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| PspPI | GGNCC | 2 cut(s) | 145, 281 |
| RsaI | GTAC | 1 cut(s) | 126 |
| RsaNI | GTAC | 1 cut(s) | 125 |
| SaqAI | TTAA | 2 cut(s) | 188, 291 |
| Sau3AI | GATC | 1 cut(s) | 273 |
| Sau96I | GGNCC | 2 cut(s) | 145, 281 |
| SetI | ASST | 5 cut(s) | 30, 126, 147, 187, 316 |
| SfcI | CTRYAG | 1 cut(s) | 175 |
| SinI | GGWCC | 1 cut(s) | 145 |
| Sse9I | AATT | 2 cut(s) | 102, 149 |
| SspMI | CTAG | 1 cut(s) | 355 |
| TaqI | TCGA | 2 cut(s) | 23, 130 |
| TasI | AATT | 2 cut(s) | 102, 149 |
| TfiI | GAWTC | 2 cut(s) | 11, 47 |
| Tru1I | TTAA | 2 cut(s) | 188, 291 |
| Tru9I | TTAA | 2 cut(s) | 188, 291 |
| TseFI | GTSAC | 1 cut(s) | 85 |
| Tsp45I | GTSAC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 1 cut(s) | 170 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XapI | RAATTY | 1 cut(s) | 102 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 78 |
| XspI | CTAG | 1 cut(s) | 355 |