bromo domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0359781 RchiOBHm_Chr2g0138061 RchiOBHm_Chr2g0148721 RchiOBHm_Chr7g0216041 |
| rosa_laevigata | RLG00000028710 |
| rosa_multiflora | Rmu_sc0000124.1_g000025 Rmu_sc0007828.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00070670 Rroxscaffold_3G00243710 Rroxscaffold_4G00286700 Rroxscaffold_4G00287320 Rroxscaffold_5G00348630 Rroxscaffold_5G00379830 Rroxscaffold_6G00391350 |
| rosa_samantha | Rh2AG198900 Rh2CG110500 Rh2DG206500 Rh6BG130400 Rh6CG128600 Rh6DG115800 Rh7BG287800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 75 |
| AgsI | TTSAA | 1 cut(s) | 80 |
| AluBI | AGCT | 3 cut(s) | 100, 245, 296 |
| AluI | AGCT | 3 cut(s) | 100, 245, 296 |
| ApeKI | GCWGC | 4 cut(s) | 61, 161, 242, 296 |
| ApoI | RAATTY | 1 cut(s) | 75 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 75 |
| AspLEI | GCGC | 1 cut(s) | 61 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 123, 156 |
| BbvI | GCAGC | 4 cut(s) | 73, 173, 254, 283 |
| BciVI | GTATCC | 1 cut(s) | 151 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BfmI | CTRYAG | 2 cut(s) | 135, 234 |
| BfuI | GTATCC | 1 cut(s) | 151 |
| BisI | GCNGC | 4 cut(s) | 62, 162, 243, 297 |
| BlsI | GCNGC | 4 cut(s) | 63, 163, 244, 298 |
| BmrI | ACTGGG | 1 cut(s) | 184 |
| BmsI | GCATC | 2 cut(s) | 10, 18 |
| BmuI | ACTGGG | 1 cut(s) | 184 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| BseGI | GGATG | 1 cut(s) | 33 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseXI | GCAGC | 4 cut(s) | 73, 173, 254, 283 |
| BseYI | CCCAGC | 1 cut(s) | 23 |
| BsgI | GTGCAG | 1 cut(s) | 282 |
| BspHI | TCATGA | 1 cut(s) | 204 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 211 |
| Bst6I | CTCTTC | 2 cut(s) | 87, 174 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 114, 248 |
| BstF5I | GGATG | 1 cut(s) | 33 |
| BstHHI | GCGC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 114, 242, 248 |
| BstSFI | CTRYAG | 2 cut(s) | 135, 234 |
| BstV1I | GCAGC | 4 cut(s) | 73, 173, 254, 283 |
| BsuI | GTATCC | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 33 |
| BtsI | GCAGTG | 1 cut(s) | 231 |
| BtsIMutI | CAGTG | 2 cut(s) | 172, 231 |
| CciI | TCATGA | 1 cut(s) | 204 |
| CfoI | GCGC | 1 cut(s) | 61 |
| CviAII | CATG | 2 cut(s) | 65, 205 |
| CviJI | RGCY | 4 cut(s) | 100, 164, 245, 296 |
| CviKI_1 | RGCY | 4 cut(s) | 100, 164, 245, 296 |
| Eam1104I | CTCTTC | 2 cut(s) | 87, 174 |
| EarI | CTCTTC | 2 cut(s) | 87, 174 |
| Eco32I | GATATC | 1 cut(s) | 6 |
| EcoRI | GAATTC | 1 cut(s) | 75 |
| EcoRV | GATATC | 1 cut(s) | 6 |
| EcoT22I | ATGCAT | 1 cut(s) | 33 |
| FaeI | CATG | 2 cut(s) | 68, 208 |
| FaiI | YATR | 5 cut(s) | 33, 66, 147, 206, 249 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 84, 116 |
| FatI | CATG | 2 cut(s) | 64, 204 |
| Fnu4HI | GCNGC | 4 cut(s) | 62, 162, 243, 297 |
| FokI | GGATG | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 4 cut(s) | 62, 162, 243, 297 |
| FspBI | CTAG | 1 cut(s) | 224 |
| GlaI | GCGC | 1 cut(s) | 60 |
| GluI | GCNGC | 4 cut(s) | 62, 162, 243, 297 |
| GsaI | CCCAGC | 1 cut(s) | 27 |
| HhaI | GCGC | 1 cut(s) | 61 |
| Hin1II | CATG | 2 cut(s) | 68, 208 |
| Hin6I | GCGC | 1 cut(s) | 59 |
| HinP1I | GCGC | 1 cut(s) | 59 |
| HindIII | AAGCTT | 1 cut(s) | 98 |
| HinfI | GANTC | 1 cut(s) | 49 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 321 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| Hpy99I | CGWCG | 1 cut(s) | 290 |
| HpyAV | CCTTC | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 211 |
| HpyCH4V | TGCA | 7 cut(s) | 31, 108, 117, 161, 236, 251, 299 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 114, 242, 248 |
| Hsp92II | CATG | 2 cut(s) | 68, 208 |
| HspAI | GCGC | 1 cut(s) | 59 |
| LmnI | GCTCC | 1 cut(s) | 293 |
| LpnPI | CCDG | 4 cut(s) | 9, 160, 222, 249 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 173, 254, 283 |
| LweI | GCATC | 2 cut(s) | 10, 18 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MboII | GAAGA | 2 cut(s) | 104, 161 |
| MluCI | AATT | 1 cut(s) | 75 |
| MmeI | TCCRAC | 1 cut(s) | 271 |
| MnlI | CCTC | 1 cut(s) | 61 |
| Mph1103I | ATGCAT | 1 cut(s) | 33 |
| MroXI | GAANNNNTTC | 1 cut(s) | 75 |
| MseI | TTAA | 1 cut(s) | 260 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 114, 242, 248 |
| NlaIII | CATG | 2 cut(s) | 68, 208 |
| NsiI | ATGCAT | 1 cut(s) | 33 |
| PagI | TCATGA | 1 cut(s) | 204 |
| PdmI | GAANNNNTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 49 |
| PkrI | GCNGC | 4 cut(s) | 63, 163, 244, 298 |
| PspFI | CCCAGC | 1 cut(s) | 23 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| SaqAI | TTAA | 1 cut(s) | 260 |
| SatI | GCNGC | 4 cut(s) | 62, 162, 243, 297 |
| SetI | ASST | 3 cut(s) | 102, 247, 298 |
| SfaNI | GCATC | 2 cut(s) | 10, 18 |
| SfcI | CTRYAG | 2 cut(s) | 135, 234 |
| SgeI | CNNG | 8 cut(s) | 36, 77, 92, 187, 217, 236, 249, 276 |
| Sse9I | AATT | 1 cut(s) | 75 |
| SspMI | CTAG | 1 cut(s) | 224 |
| TaaI | ACNGT | 2 cut(s) | 139, 211 |
| TasI | AATT | 1 cut(s) | 75 |
| TfiI | GAWTC | 1 cut(s) | 49 |
| Tru1I | TTAA | 1 cut(s) | 260 |
| Tru9I | TTAA | 1 cut(s) | 260 |
| TscAI | CASTG | 2 cut(s) | 179, 238 |
| TseI | GCWGC | 4 cut(s) | 61, 161, 242, 296 |
| TspDTI | ATGAA | 2 cut(s) | 62, 105 |
| TspRI | CASTG | 2 cut(s) | 179, 238 |
| XapI | RAATTY | 1 cut(s) | 75 |
| XmnI | GAANNNNTTC | 1 cut(s) | 75 |
| XspI | CTAG | 1 cut(s) | 224 |
| Zsp2I | ATGCAT | 1 cut(s) | 33 |