Rh2CG534000

Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
71037895 .. 71045756
7862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG534000.1

Sequence Viewer

Length: 1509 bp
ATGGCTACTACTACTTCAGCCTCGAAAGTCATGTCTCTGTCTCTCAGTGTGATTTTGGGTCTCTCATTGTTCTTGGGTCTGGTCAGCTCGGCCAAATTCGACCAGCTTTTCCAGCCCTACTGGGCCTCCGACCATTTCACATACGAAGGCGAGCTTCTTCATATGAAGCTCGACAATTTTTCCGGAGCTGGGTTTTCATCCAAGAACAAGTACATGTTTGGCAAAGTGACCGTACAGATTAAGCTCATAGAGGGTGACTCTGCTGGAACTGTCACTGCTTTCTATATGTCATCGGACGGTCCACTGCACAACGAATTTGATTTCGAGTTCCTGGGCAACACCACAGGGGAGCCTTACTCTGTTCAGACCAACCTCTATATCAATGGCGTCGGCAATAGAGAGCAAAGGCTCGACCTTTGGTTTGACCCAACCACGGACTTCCATTCCTACTCCATTTTCTGGAACCAGCGCCAAGTAGTGTTTCTAGTGGATGAGACCCCAATTAGGGTACACACAAACATGGAAAGCAAGGGTTTGCCCTTCCCCAAGGACCAGGCTATGGGGGTATACAGCTCAATCTGGAATGCCGATGACTGGGCCACACAGGGCGGGCGGGTCAAGACCGATTGGTCCCATGGACCCTTTGTTGCATCTTATAAGGGCTTTGACATCAATGCCTGTGAGTGCCCGGTCTCCGTGGCCGGAGCCGATAACGCCAAGAAGTGCACCAGCAGCGCAGACAAGAAGTACTGGTGGGATGAGCCTGTGCTGTCCGAGCTGAACGTCCACCAGAACCACCAGCTGGTGTGGGTTAAGAACCACCACATGGTCTATGACTATTGCACTGATACTGCTAGGTTCCCAGTCACCCCACCCCAATTGAGAGACTCAAGGCTGGGGAGTCACGGAGCAGCAGAACAAGGTATCTCATTGTATTCCCTGTTCAGTACAAATTTGGATTGTATGACCAAGTTGAAAAAATTCCATAGTAAACAGGATGGATCTAATCCTGTGGCTGAGACTCTTGCGAAGTGGAAAGAGATTAACGACAATCTAGAATCATCCAATGATGGGAGTAAACCAACTCGCAAAGTTCCTGCCAAGGGGTCTAAGAAGGGATGCATGAAAGGTAAGGGAGGACCTGAGAATTCTCGATGTAACTACAGAGGTGTTAGGCAGAGGACATGGGGCAAGTGGGTTGCAGAAATCCGCTCACCAAATAGGGGAAGTAGGCTCTGGCTAGGTACCTTTCCAACTGCAATTGAAGCTGCTCTTGCCTACGATGAAGCTGCTAGGGCCATGTACGGTTCCTCTGCCCGTCTCAACTTTCCGAAGGTTACGATCTCCAGTTACTCAACAAATTCTTCTTGTAGAGCAACTCTATCGGCTCCTTCCTGTGTGGTGACTTCTGCAGGTTCAGAATCATCAGGTCACTCTGAGGATTTTTCGCCTCAGGATAAGATTGGTATCTACATACAATTTCTCAACTTTGCCTATGCCAAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

502

Amino Acids

55.77

Weight (kDa)

7.97

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_16 PF00722 35 - 211 1.9e-60 Glycosyl hydrolases family 16
XET_C PF06955 247 - 292 4.3e-16 Xyloglucan endo-transglycosylase (XET) C-terminus
AP2 PF00847 387 - 436 8e-15 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0008991)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
AasI GACNNNNNNGTC 1 cut(s) 628
Acc36I ACCTGC 1 cut(s) 1403
Acc65I GGTACC 1 cut(s) 1244
AccB1I GGYRCC 1 cut(s) 1244
AccB7I CCANNNNNTGG 4 cut(s) 459, 559, 802, 826
AccBSI CCGCTC 1 cut(s) 1212
AccI GTMKAC 1 cut(s) 567
AccIII TCCGGA 1 cut(s) 182
AciI CCGC 3 cut(s) 609, 613, 1210
AclWI GGATC 1 cut(s) 1009
AcoI YGGCCR 2 cut(s) 90, 699
AcsI RAATTY 6 cut(s) 95, 314, 952, 980, 1147, 1360
AcyI GRCGYC 1 cut(s) 387
AfaI GTAC 7 cut(s) 212, 234, 510, 749, 949, 1246, 1304
AflIII ACRYGT 1 cut(s) 213
AgsI TTSAA 2 cut(s) 976, 1265
AjnI CCWGG 2 cut(s) 330, 552
AjuI GAANNNNNNNTTGG 2 cut(s) 465, 497
Alw21I GWGCWC 1 cut(s) 728
Alw26I GTCTC 8 cut(s) 39, 45, 65, 488, 697, 879, 1013, 1325
Alw44I GTGCAC 1 cut(s) 724
AlwI GGATC 1 cut(s) 1009
Aor13HI TCCGGA 1 cut(s) 182
AoxI GGCC 5 cut(s) 90, 123, 597, 699, 1296
ApaLI GTGCAC 1 cut(s) 724
ApeKI GCWGC 4 cut(s) 732, 911, 1268, 1289
ApoI RAATTY 6 cut(s) 95, 314, 952, 980, 1147, 1360
ArsI GACNNNNNNTTYG 4 cut(s) 17, 49, 404, 436
Asp700I GAANNNNTTC 1 cut(s) 980
Asp718I GGTACC 1 cut(s) 1244
AspLEI GCGC 2 cut(s) 471, 737
AspS9I GGNCC 8 cut(s) 123, 299, 550, 597, 630, 638, 1139, 1296
AsuC2I CCSGG 1 cut(s) 689
AsuHPI GGTGA 4 cut(s) 266, 859, 1206, 1414
AvaII GGWCC 5 cut(s) 299, 550, 630, 638, 1139
AxyI CCTNAGG 1 cut(s) 1452
BaeGI GKGCMC 2 cut(s) 689, 728
BanI GGYRCC 1 cut(s) 1244
Bbv12I GWGCWC 1 cut(s) 728
BbvI GCAGC 4 cut(s) 744, 923, 1255, 1276
BccI CCATC 2 cut(s) 992, 1064
BcgI CGANNNNNNTGC 4 cut(s) 1271, 1305, 1365, 1399
BciT130I CCWGG 2 cut(s) 332, 554
BcnI CCSGG 1 cut(s) 689
BcoDI GTCTC 8 cut(s) 39, 45, 65, 488, 697, 879, 1013, 1325
BfaI CTAG 5 cut(s) 485, 855, 1055, 1241, 1293
BfmI CTRYAG 2 cut(s) 1162, 1410
BfoI RGCGCY 1 cut(s) 472
BfuAI ACCTGC 1 cut(s) 1403
BisI GCNGC 4 cut(s) 733, 912, 1269, 1290
BlsI GCNGC 4 cut(s) 734, 913, 1270, 1291
BmcAI AGTACT 1 cut(s) 749
Bme1390I CCNGG 3 cut(s) 332, 554, 689
Bme18I GGWCC 5 cut(s) 299, 550, 630, 638, 1139
BmgT120I GGNCC 8 cut(s) 123, 299, 550, 597, 630, 638, 1139, 1296
BmiI GGNNCC 9 cut(s) 351, 464, 632, 640, 706, 860, 1246, 1309, 1389
BmrFI CCNGG 3 cut(s) 332, 554, 689
BmrI ACTGGG 3 cut(s) 130, 604, 857
BmsI GCATC 2 cut(s) 659, 1109
BmuI ACTGGG 3 cut(s) 130, 604, 857
BplI GAGNNNNNCTC 4 cut(s) 242, 274, 341, 373
BpmI CTGGAG 1 cut(s) 1330
BpuEI CTTGAG 1 cut(s) 874
BpuMI CCSGG 1 cut(s) 689
BsaBI GATNNNNATC 1 cut(s) 1466
BsaHI GRCGYC 1 cut(s) 387
BsaI GGTCTC 3 cut(s) 65, 488, 697
BsaJI CCNNGG 6 cut(s) 331, 432, 546, 634, 696, 1101
BsaWI WCCGGW 1 cut(s) 182
BsaXI ACNNNNNCTCC 2 cut(s) 110, 140
Bse1I ACTGG 5 cut(s) 125, 599, 755, 863, 1347
Bse21I CCTNAGG 1 cut(s) 1452
Bse8I GATNNNNATC 1 cut(s) 1466
BseAI TCCGGA 1 cut(s) 182
BseBI CCWGG 2 cut(s) 332, 554
BseDI CCNNGG 6 cut(s) 331, 432, 546, 634, 696, 1101
BseGI GGATG 6 cut(s) 197, 496, 763, 1003, 1061, 1124
BseJI GATNNNNATC 1 cut(s) 1466
BseMII CTCAG 5 cut(s) 58, 1008, 1134, 1428, 1466
BseNI ACTGG 5 cut(s) 125, 599, 755, 863, 1347
BseSI GKGCMC 2 cut(s) 689, 728
BseXI GCAGC 4 cut(s) 744, 923, 1255, 1276
BseYI CCCAGC 2 cut(s) 188, 895
BsgI GTGCAG 1 cut(s) 290
BshFI GGCC 5 cut(s) 92, 125, 599, 701, 1298
BshNI GGYRCC 1 cut(s) 1244
BsiHKAI GWGCWC 1 cut(s) 728
BsiSI CCGG 3 cut(s) 183, 689, 702
BslFI GGGAC 1 cut(s) 616
BsmAI GTCTC 8 cut(s) 39, 45, 65, 488, 697, 879, 1013, 1325
BsmBI CGTCTC 1 cut(s) 1325
BsmFI GGGAC 1 cut(s) 616
BsmI GAATGC 1 cut(s) 589
BsnI GGCC 5 cut(s) 92, 125, 599, 701, 1298
Bso31I GGTCTC 3 cut(s) 65, 488, 697
Bsp1286I GDGCHC 2 cut(s) 689, 728
Bsp13I TCCGGA 1 cut(s) 182
Bsp143I GATC 2 cut(s) 1001, 1341
Bsp19I CCATGG 1 cut(s) 634
BspACI CCGC 3 cut(s) 609, 613, 1210
BspANI GGCC 5 cut(s) 92, 125, 599, 701, 1298
BspCNI CTCAG 5 cut(s) 57, 1009, 1135, 1429, 1465
BspEI TCCGGA 1 cut(s) 182
BspLI GGNNCC 9 cut(s) 351, 464, 632, 640, 706, 860, 1246, 1309, 1389
BspMAI CTGCAG 1 cut(s) 1414
BspMI ACCTGC 1 cut(s) 1403
BspPI GGATC 1 cut(s) 1009
BspT107I GGYRCC 1 cut(s) 1244
BspTNI GGTCTC 3 cut(s) 65, 488, 697
BsrBI CCGCTC 1 cut(s) 1212
BsrI ACTGG 5 cut(s) 125, 599, 755, 863, 1347
BssECI CCNNGG 6 cut(s) 331, 432, 546, 634, 696, 1101
BssMI GATC 2 cut(s) 1001, 1341
BssNAI GTATAC 1 cut(s) 568
BssNI GRCGYC 1 cut(s) 387
BssT1I CCWWGG 3 cut(s) 546, 634, 1101
Bst1107I GTATAC 1 cut(s) 568
Bst2UI CCWGG 2 cut(s) 332, 554
Bst4CI ACNGT 4 cut(s) 232, 271, 299, 1307
BstACI GRCGYC 1 cut(s) 387
BstC8I GCNNGC 2 cut(s) 152, 611
BstDEI CTNAG 6 cut(s) 44, 1017, 1110, 1143, 1437, 1452
BstDSI CCRYGG 3 cut(s) 432, 634, 696
BstF5I GGATG 6 cut(s) 197, 496, 763, 1003, 1061, 1124
BstH2I RGCGCY 1 cut(s) 472
BstHHI GCGC 2 cut(s) 471, 737
BstKTI GATC 2 cut(s) 1004, 1344
BstMAI GTCTC 8 cut(s) 39, 45, 65, 488, 697, 879, 1013, 1325
BstMBI GATC 2 cut(s) 1001, 1341
BstMWI GCNNNNNNNGC 7 cut(s) 112, 713, 732, 775, 1265, 1274, 1295
BstNI CCWGG 2 cut(s) 332, 554
BstNSI RCATGY 1 cut(s) 217
BstSCI CCNGG 3 cut(s) 330, 552, 687
BstSFI CTRYAG 2 cut(s) 1162, 1410
BstSLI GKGCMC 2 cut(s) 689, 728
BstV1I GCAGC 4 cut(s) 744, 923, 1255, 1276
BstX2I RGATCY 1 cut(s) 1001
BstYI RGATCY 1 cut(s) 1001
BstZ17I GTATAC 1 cut(s) 568
Bsu36I CCTNAGG 1 cut(s) 1452
BsuRI GGCC 5 cut(s) 92, 125, 599, 701, 1298
BtgI CCRYGG 3 cut(s) 432, 634, 696
BtsCI GGATG 6 cut(s) 197, 496, 763, 1003, 1061, 1124
BtsI GCAGTG 2 cut(s) 273, 302
BtsIMutI CAGTG 4 cut(s) 52, 273, 302, 843
BveI ACCTGC 1 cut(s) 1403
Cac8I GCNNGC 2 cut(s) 152, 611
CfoI GCGC 2 cut(s) 471, 737
Cfr13I GGNCC 8 cut(s) 123, 299, 550, 597, 630, 638, 1139, 1296
CseI GACGC 1 cut(s) 376
Csp6I GTAC 7 cut(s) 211, 233, 509, 748, 948, 1245, 1303
CspCI CAANNNNNGTGG 2 cut(s) 861, 896
CviAII CATG 8 cut(s) 31, 214, 520, 635, 826, 1123, 1185, 1300
CviQI GTAC 7 cut(s) 211, 233, 509, 748, 948, 1245, 1303
DdeI CTNAG 6 cut(s) 44, 1017, 1110, 1143, 1437, 1452
DpnI GATC 2 cut(s) 1003, 1343
DpnII GATC 2 cut(s) 1001, 1341
DrdI GACNNNNNNGTC 1 cut(s) 628
DseDI GACNNNNNNGTC 1 cut(s) 628
EaeI YGGCCR 2 cut(s) 90, 699
Eco130I CCWWGG 3 cut(s) 546, 634, 1101
Eco31I GGTCTC 3 cut(s) 65, 488, 697
Eco47I GGWCC 5 cut(s) 299, 550, 630, 638, 1139
Eco81I CCTNAGG 1 cut(s) 1452
EcoO109I RGGNCCY 1 cut(s) 1139
EcoRI GAATTC 1 cut(s) 1147
EcoRII CCWGG 2 cut(s) 330, 552
EcoT14I CCWWGG 3 cut(s) 546, 634, 1101
EcoT22I ATGCAT 1 cut(s) 1124
ErhI CCWWGG 3 cut(s) 546, 634, 1101
Esp3I CGTCTC 1 cut(s) 1325
FaeI CATG 8 cut(s) 34, 217, 523, 638, 829, 1126, 1188, 1303
FalI AAGNNNNNCTT 4 cut(s) 138, 170, 1257, 1289
FaqI GGGAC 1 cut(s) 616
FatI CATG 8 cut(s) 30, 213, 519, 634, 825, 1122, 1184, 1299
FauI CCCGC 2 cut(s) 602, 606
FauNDI CATATG 1 cut(s) 162
FblI GTMKAC 1 cut(s) 567
Fnu4HI GCNGC 4 cut(s) 733, 912, 1269, 1290
FokI GGATG 6 cut(s) 184, 503, 770, 1010, 1048, 1131
Fsp4HI GCNGC 4 cut(s) 733, 912, 1269, 1290
FspBI CTAG 5 cut(s) 485, 855, 1055, 1241, 1293
GlaI GCGC 2 cut(s) 470, 736
GluI GCNGC 4 cut(s) 733, 912, 1269, 1290
GsaI CCCAGC 2 cut(s) 192, 899
GsuI CTGGAG 1 cut(s) 1330
HaeII RGCGCY 1 cut(s) 472
HaeIII GGCC 5 cut(s) 92, 125, 599, 701, 1298
HapII CCGG 3 cut(s) 183, 689, 702
HgaI GACGC 1 cut(s) 376
HhaI GCGC 2 cut(s) 471, 737
Hin1I GRCGYC 1 cut(s) 387
Hin1II CATG 8 cut(s) 34, 217, 523, 638, 829, 1126, 1188, 1303
Hin6I GCGC 2 cut(s) 469, 735
HinP1I GCGC 2 cut(s) 469, 735
HinfI GANTC 6 cut(s) 257, 887, 901, 1021, 1058, 1421
HpaII CCGG 3 cut(s) 183, 689, 702
HphI GGTGA 4 cut(s) 266, 859, 1206, 1414
Hpy166II GTNNAC 7 cut(s) 302, 511, 568, 726, 787, 992, 1079
Hpy188I TCNGA 7 cut(s) 130, 295, 366, 775, 1332, 1420, 1438
Hpy188III TCNNGA 7 cut(s) 183, 460, 580, 619, 1055, 1152, 1454
Hpy8I GTNNAC 7 cut(s) 302, 511, 568, 726, 787, 992, 1079
Hpy99I CGWCG 1 cut(s) 392
HpyAV CCTTC 5 cut(s) 140, 550, 1108, 1327, 1401
HpyCH4III ACNGT 4 cut(s) 232, 271, 299, 1307
HpyCH4IV ACGT 1 cut(s) 783
HpyCH4V TGCA 8 cut(s) 307, 650, 726, 843, 1122, 1202, 1259, 1412
HpyF10VI GCNNNNNNNGC 7 cut(s) 112, 713, 732, 775, 1265, 1274, 1295
HpyF3I CTNAG 6 cut(s) 44, 1017, 1110, 1143, 1437, 1452
HpySE526I ACGT 1 cut(s) 783
Hsp92I GRCGYC 1 cut(s) 387
Hsp92II CATG 8 cut(s) 34, 217, 523, 638, 829, 1126, 1188, 1303
HspAI GCGC 2 cut(s) 469, 735
Kpn2I TCCGGA 1 cut(s) 182
KpnI GGTACC 1 cut(s) 1248
Kzo9I GATC 2 cut(s) 1001, 1341
LmnI GCTCC 5 cut(s) 185, 349, 704, 908, 1393
Lsp1109I GCAGC 4 cut(s) 744, 923, 1255, 1276
LweI GCATC 2 cut(s) 659, 1109
MaeI CTAG 5 cut(s) 485, 855, 1055, 1241, 1293
MaeII ACGT 1 cut(s) 783
MalI GATC 2 cut(s) 1003, 1343
MbiI CCGCTC 1 cut(s) 1212
MboI GATC 2 cut(s) 1001, 1341
MboII GAAGA 2 cut(s) 149, 1356
MfeI CAATTG 2 cut(s) 878, 1260
MflI RGATCY 1 cut(s) 1001
MhlI GDGCHC 2 cut(s) 689, 728
MlyI GAGTC 4 cut(s) 251, 881, 910, 1015
MmeI TCCRAC 2 cut(s) 153, 1277
Mph1103I ATGCAT 1 cut(s) 1124
MroI TCCGGA 1 cut(s) 182
MroXI GAANNNNTTC 1 cut(s) 980
MseI TTAA 3 cut(s) 240, 813, 1044
MslI CAYNNNNRTG 1 cut(s) 518
MspA1I CMGCKG 1 cut(s) 802
MspI CCGG 3 cut(s) 183, 689, 702
MspR9I CCNGG 3 cut(s) 332, 554, 689
MunI CAATTG 2 cut(s) 878, 1260
Mva1269I GAATGC 1 cut(s) 589
MvaI CCWGG 2 cut(s) 332, 554
MwoI GCNNNNNNNGC 7 cut(s) 112, 713, 732, 775, 1265, 1274, 1295
NciI CCSGG 1 cut(s) 689
NcoI CCATGG 1 cut(s) 634
NdeI CATATG 1 cut(s) 162
NdeII GATC 2 cut(s) 1001, 1341
NlaIII CATG 8 cut(s) 34, 217, 523, 638, 829, 1126, 1188, 1303
NlaIV GGNNCC 9 cut(s) 351, 464, 632, 640, 706, 860, 1246, 1309, 1389
NmeAIII GCCGAG 1 cut(s) 68
NmuCI GTSAC 7 cut(s) 226, 254, 271, 865, 902, 1402, 1430
NsiI ATGCAT 1 cut(s) 1124
NspI RCATGY 1 cut(s) 217
PciI ACATGT 1 cut(s) 213
PctI GAATGC 1 cut(s) 589
PdmI GAANNNNTTC 1 cut(s) 980
PfeI GAWTC 2 cut(s) 1058, 1421
PflMI CCANNNNNTGG 4 cut(s) 459, 559, 802, 826
PkrI GCNGC 4 cut(s) 734, 913, 1270, 1291
PleI GAGTC 4 cut(s) 251, 881, 909, 1015
PpsI GAGTC 4 cut(s) 251, 881, 909, 1015
PpuMI RGGWCCY 1 cut(s) 1139
PscI ACATGT 1 cut(s) 213
PsiI TTATAA 1 cut(s) 657
Psp5II RGGWCCY 1 cut(s) 1139
Psp6I CCWGG 2 cut(s) 330, 552
PspFI CCCAGC 2 cut(s) 188, 895
PspGI CCWGG 2 cut(s) 330, 552
PspN4I GGNNCC 9 cut(s) 351, 464, 632, 640, 706, 860, 1246, 1309, 1389
PspPI GGNCC 8 cut(s) 123, 299, 550, 597, 630, 638, 1139, 1296
PspPPI RGGWCCY 1 cut(s) 1139
PsrI GAACNNNNNNTAC 2 cut(s) 926, 958
PstI CTGCAG 1 cut(s) 1414
PsuI RGATCY 1 cut(s) 1001
PvuII CAGCTG 1 cut(s) 802
RsaI GTAC 7 cut(s) 212, 234, 510, 749, 949, 1246, 1304
RsaNI GTAC 7 cut(s) 211, 233, 509, 748, 948, 1245, 1303
RseI CAYNNNNRTG 1 cut(s) 518
SaqAI TTAA 3 cut(s) 240, 813, 1044
SatI GCNGC 4 cut(s) 733, 912, 1269, 1290
Sau3AI GATC 2 cut(s) 1001, 1341
Sau96I GGNCC 8 cut(s) 123, 299, 550, 597, 630, 638, 1139, 1296
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 4 cut(s) 251, 881, 910, 1015
ScrFI CCNGG 3 cut(s) 332, 554, 689
SduI GDGCHC 2 cut(s) 689, 728
SfaNI GCATC 2 cut(s) 659, 1109
SfcI CTRYAG 2 cut(s) 1162, 1410
SinI GGWCC 5 cut(s) 299, 550, 630, 638, 1139
SmiMI CAYNNNNRTG 1 cut(s) 518
SmlI CTYRAG 1 cut(s) 889
SmoI CTYRAG 1 cut(s) 889
SsiI CCGC 3 cut(s) 609, 613, 1210
SspMI CTAG 5 cut(s) 485, 855, 1055, 1241, 1293
StyD4I CCNGG 3 cut(s) 330, 552, 687
StyI CCWWGG 3 cut(s) 546, 634, 1101
TaaI ACNGT 4 cut(s) 232, 271, 299, 1307
TaiI ACGT 1 cut(s) 786
TaqI TCGA 6 cut(s) 23, 99, 171, 324, 411, 1153
TaqII GACCGA 1 cut(s) 638
TatI WGTACW 3 cut(s) 210, 747, 947
TfiI GAWTC 2 cut(s) 1058, 1421
Tru1I TTAA 3 cut(s) 240, 813, 1044
Tru9I TTAA 3 cut(s) 240, 813, 1044
TscAI CASTG 4 cut(s) 52, 280, 309, 850
TseFI GTSAC 7 cut(s) 226, 254, 271, 865, 902, 1402, 1430
TseI GCWGC 4 cut(s) 732, 911, 1268, 1289
Tsp45I GTSAC 7 cut(s) 226, 254, 271, 865, 902, 1402, 1430
TspDTI ATGAA 5 cut(s) 149, 179, 186, 1139, 1299
TspGWI ACGGA 3 cut(s) 449, 685, 921
TspRI CASTG 4 cut(s) 52, 280, 309, 850
Van91I CCANNNNNTGG 4 cut(s) 459, 559, 802, 826
VneI GTGCAC 1 cut(s) 724
VpaK11BI GGWCC 5 cut(s) 299, 550, 630, 638, 1139
XapI RAATTY 6 cut(s) 95, 314, 952, 980, 1147, 1360
XbaI TCTAGA 1 cut(s) 1054
XceI RCATGY 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 567
XmnI GAANNNNTTC 1 cut(s) 980
XspI CTAG 5 cut(s) 485, 855, 1055, 1241, 1293
ZrmI AGTACT 1 cut(s) 749
Zsp2I ATGCAT 1 cut(s) 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.