Rh2DG664100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
88970265 .. 88972093
1829 bp
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UTR
Exon/CDS
Intron
Rh2DG664100.1

Sequence Viewer

Length: 219 bp
ATGGTTAGGAGAAACATAAGTAAGGTTGGTGTAGCATCTAGATCAAAAACAATATCTTCCCAAAGTGATGCTTCAAACTCTATGCATACATCATCTCAACCATCAATTCCCACAACAATTTTCCAGCTTAACCACTCATTCTTAAGTCAGCCTATTGGTTCATCTAGGAAGAGCAAAGTGTCATATGTTAAAGATGGGACTACTGAAGGGAAGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

72

Amino Acids

7.76

Weight (kDa)

10.69

Isoelectric Point (pI)

70.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflII CTTAAG 1 cut(s) 142
AgsI TTSAA 1 cut(s) 75
AluBI AGCT 1 cut(s) 127
AluI AGCT 1 cut(s) 127
BccI CCATC 2 cut(s) 109, 188
BfaI CTAG 2 cut(s) 39, 165
BfrI CTTAAG 1 cut(s) 142
BmsI GCATC 2 cut(s) 44, 58
BslFI GGGAC 1 cut(s) 211
BsmFI GGGAC 1 cut(s) 211
Bsp143I GATC 1 cut(s) 41
BspQI GCTCTTC 1 cut(s) 164
BspTI CTTAAG 1 cut(s) 142
BssMI GATC 1 cut(s) 41
Bst6I CTCTTC 1 cut(s) 164
BstAFI CTTAAG 1 cut(s) 142
BstKTI GATC 1 cut(s) 44
BstMBI GATC 1 cut(s) 41
CviJI RGCY 2 cut(s) 127, 151
CviKI_1 RGCY 2 cut(s) 127, 151
DpnI GATC 1 cut(s) 43
DpnII GATC 1 cut(s) 41
Eam1104I CTCTTC 1 cut(s) 164
EarI CTCTTC 1 cut(s) 164
EcoT22I ATGCAT 1 cut(s) 87
FaiI YATR 5 cut(s) 17, 83, 87, 184, 186
FalI AAGNNNNNCTT 2 cut(s) 55, 87
FaqI GGGAC 1 cut(s) 211
FauNDI CATATG 1 cut(s) 184
FspBI CTAG 2 cut(s) 39, 165
Hpy188III TCNNGA 1 cut(s) 39
HpyAV CCTTC 1 cut(s) 200
HpyCH4V TGCA 1 cut(s) 85
Kzo9I GATC 1 cut(s) 41
LguI GCTCTTC 1 cut(s) 164
LpnPI CCDG 1 cut(s) 137
LweI GCATC 2 cut(s) 44, 58
MaeI CTAG 2 cut(s) 39, 165
MalI GATC 1 cut(s) 43
MboI GATC 1 cut(s) 41
MboII GAAGA 2 cut(s) 48, 181
MluCI AATT 2 cut(s) 105, 117
Mph1103I ATGCAT 1 cut(s) 87
MseI TTAA 3 cut(s) 129, 143, 189
MspCI CTTAAG 1 cut(s) 142
NdeI CATATG 1 cut(s) 184
NdeII GATC 1 cut(s) 41
NsiI ATGCAT 1 cut(s) 87
PciSI GCTCTTC 1 cut(s) 164
SapI GCTCTTC 1 cut(s) 164
SaqAI TTAA 3 cut(s) 129, 143, 189
Sau3AI GATC 1 cut(s) 41
SetI ASST 2 cut(s) 27, 129
SfaNI GCATC 2 cut(s) 44, 58
SgeI CNNG 3 cut(s) 51, 136, 177
SmlI CTYRAG 1 cut(s) 142
SmoI CTYRAG 1 cut(s) 142
Sse9I AATT 2 cut(s) 105, 117
SspMI CTAG 2 cut(s) 39, 165
TasI AATT 2 cut(s) 105, 117
Tru1I TTAA 3 cut(s) 129, 143, 189
Tru9I TTAA 3 cut(s) 129, 143, 189
TspDTI ATGAA 1 cut(s) 150
Vha464I CTTAAG 1 cut(s) 142
XbaI TCTAGA 1 cut(s) 38
XspI CTAG 2 cut(s) 39, 165
Zsp2I ATGCAT 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.