Rh3BG311600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
31595999 .. 31597919
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG311600.1

Sequence Viewer

Length: 246 bp
ATGGTACATCGTCCCATTCAACCTCCACCATTTAGAAGAATGCCAGGGAGGCTAAAGAAGGTTAGGAGAAAGGAAGTAGGAGAGACCATACCAGCTAGTGAAGGGACAACCACTGCAGCAACTATGAACCCAACAATACCAACATCAAATAAACCACCCAAGATTGTATATGTTGGTGGAAAGTGCACTGGTTGTGGGAATCCAAAGCATAACATGAGAACTTGCCCCACTCATAGATATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

81

Amino Acids

8.98

Weight (kDa)

10.75

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 6
AgsI TTSAA 1 cut(s) 20
AjnI CCWGG 1 cut(s) 43
AluBI AGCT 1 cut(s) 95
AluI AGCT 1 cut(s) 95
Alw21I GWGCWC 1 cut(s) 188
Alw26I GTCTC 1 cut(s) 77
Alw44I GTGCAC 1 cut(s) 184
ApaLI GTGCAC 1 cut(s) 184
ApeKI GCWGC 1 cut(s) 116
BaeGI GKGCMC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 188
BbvI GCAGC 1 cut(s) 128
BciT130I CCWGG 1 cut(s) 45
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 1 cut(s) 96
BfmI CTRYAG 1 cut(s) 114
BglI GCCNNNNNGGC 1 cut(s) 49
BisI GCNGC 1 cut(s) 117
BlsI GCNGC 1 cut(s) 118
Bme1390I CCNGG 1 cut(s) 45
BmrFI CCNGG 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 1 cut(s) 44
Bse1I ACTGG 1 cut(s) 193
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 1 cut(s) 44
BseNI ACTGG 1 cut(s) 193
BseSI GKGCMC 1 cut(s) 188
BseXI GCAGC 1 cut(s) 128
BsiHKAI GWGCWC 1 cut(s) 188
BslFI GGGAC 1 cut(s) 118
BsmAI GTCTC 1 cut(s) 77
BsmFI GGGAC 1 cut(s) 118
BsmI GAATGC 1 cut(s) 45
Bso31I GGTCTC 1 cut(s) 77
Bsp1286I GDGCHC 1 cut(s) 188
BspMAI CTGCAG 1 cut(s) 118
BspTNI GGTCTC 1 cut(s) 77
BsrI ACTGG 1 cut(s) 193
BssECI CCNNGG 1 cut(s) 44
Bst2UI CCWGG 1 cut(s) 45
BstMAI GTCTC 1 cut(s) 77
BstMWI GCNNNNNNNGC 1 cut(s) 49
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 43
BstSFI CTRYAG 1 cut(s) 114
BstSLI GKGCMC 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 128
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 2 cut(s) 111, 186
Csp6I GTAC 1 cut(s) 5
CviAII CATG 1 cut(s) 214
CviJI RGCY 2 cut(s) 52, 95
CviKI_1 RGCY 2 cut(s) 52, 95
CviQI GTAC 1 cut(s) 5
Eco31I GGTCTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 43
FaeI CATG 1 cut(s) 217
FaiI YATR 8 cut(s) 89, 125, 169, 171, 210, 215, 234, 240
FaqI GGGAC 1 cut(s) 118
FatI CATG 1 cut(s) 213
Fnu4HI GCNGC 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 117
FspBI CTAG 1 cut(s) 96
GluI GCNGC 1 cut(s) 117
Hin1II CATG 1 cut(s) 217
HinfI GANTC 1 cut(s) 199
Hpy166II GTNNAC 1 cut(s) 186
Hpy8I GTNNAC 1 cut(s) 186
HpyAV CCTTC 2 cut(s) 52, 95
HpyCH4V TGCA 2 cut(s) 116, 186
HpyF10VI GCNNNNNNNGC 1 cut(s) 49
Hsp92II CATG 1 cut(s) 217
LpnPI CCDG 4 cut(s) 30, 57, 105, 174
Lsp1109I GCAGC 1 cut(s) 128
MaeI CTAG 1 cut(s) 96
MboII GAAGA 1 cut(s) 48
MhlI GDGCHC 1 cut(s) 188
MnlI CCTC 2 cut(s) 33, 42
MslI CAYNNNNRTG 1 cut(s) 237
MspR9I CCNGG 1 cut(s) 45
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 49
NlaIII CATG 1 cut(s) 217
PctI GAATGC 1 cut(s) 45
PfeI GAWTC 1 cut(s) 199
PkrI GCNGC 1 cut(s) 118
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
PstI CTGCAG 1 cut(s) 118
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
RseI CAYNNNNRTG 1 cut(s) 237
SatI GCNGC 1 cut(s) 117
ScrFI CCNGG 1 cut(s) 45
SduI GDGCHC 1 cut(s) 188
SetI ASST 3 cut(s) 25, 63, 97
SfcI CTRYAG 1 cut(s) 114
SgeI CNNG 8 cut(s) 56, 57, 104, 108, 172, 201, 226, 234
SmiMI CAYNNNNRTG 1 cut(s) 237
SspMI CTAG 1 cut(s) 96
StyD4I CCNGG 1 cut(s) 43
TfiI GAWTC 1 cut(s) 199
TscAI CASTG 2 cut(s) 118, 193
TseI GCWGC 1 cut(s) 116
TspDTI ATGAA 1 cut(s) 140
TspRI CASTG 2 cut(s) 118, 193
VneI GTGCAC 1 cut(s) 184
XspI CTAG 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.