Rh7BG345900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
36166978 .. 36179046
12069 bp
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UTR
Exon/CDS
Intron
Rh7BG345900.1

Sequence Viewer

Length: 369 bp
ATGTCTGATATTGTTATGATACCATTCAAAGCAGTTGATATGGGGAATGGTAAAGGGAAGAGGAAAGAGTTGGATAATGAAAACAATGATGAGGAAGTAAGAACTGAACATGTTGATGATGTTGAAGAAACAGTTGAAGAAGAGGTTGCTGATAAGTTTATTGATAGTGATTATGAATTAAACCCTGAGGATGATGGTGAAGCAAATGATGTTGAGTTCAGTGCAAATGTTGATAATGTAATGAGTTTAAGGAATGAACCGATATGGGTTTTGCAGGCCAAAGCTATGAATAGCCACAAAAGATTTGATCCCCTATTGCCATGTCAAGTAGTCTCCTATGACAAGAAGGATGTGCCTAAAACCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

122

Amino Acids

13.95

Weight (kDa)

4.34

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 302
AflIII ACRYGT 1 cut(s) 109
AgsI TTSAA 3 cut(s) 28, 125, 137
AluBI AGCT 1 cut(s) 284
AluI AGCT 1 cut(s) 284
Alw26I GTCTC 1 cut(s) 337
AlwI GGATC 1 cut(s) 302
AoxI GGCC 1 cut(s) 276
AsuHPI GGTGA 1 cut(s) 209
AxyI CCTNAGG 1 cut(s) 186
BccI CCATC 1 cut(s) 188
BcoDI GTCTC 1 cut(s) 337
Bse21I CCTNAGG 1 cut(s) 186
BseGI GGATG 2 cut(s) 196, 355
BseMII CTCAG 1 cut(s) 177
BshFI GGCC 1 cut(s) 278
BsmAI GTCTC 1 cut(s) 337
BsnI GGCC 1 cut(s) 278
Bsp143I GATC 1 cut(s) 307
BspANI GGCC 1 cut(s) 278
BspCNI CTCAG 1 cut(s) 178
BspPI GGATC 1 cut(s) 302
BssMI GATC 1 cut(s) 307
Bst4CI ACNGT 1 cut(s) 133
Bst6I CTCTTC 2 cut(s) 53, 135
BstC8I GCNNGC 1 cut(s) 276
BstDEI CTNAG 1 cut(s) 186
BstF5I GGATG 2 cut(s) 196, 355
BstKTI GATC 1 cut(s) 310
BstMAI GTCTC 1 cut(s) 337
BstMBI GATC 1 cut(s) 307
BstNSI RCATGY 1 cut(s) 113
Bsu36I CCTNAGG 1 cut(s) 186
BsuRI GGCC 1 cut(s) 278
BtsCI GGATG 2 cut(s) 196, 355
BtsIMutI CAGTG 1 cut(s) 226
Cac8I GCNNGC 1 cut(s) 276
CviAII CATG 2 cut(s) 110, 321
CviJI RGCY 3 cut(s) 278, 284, 294
CviKI_1 RGCY 3 cut(s) 278, 284, 294
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 309
DpnII GATC 1 cut(s) 307
Eam1104I CTCTTC 2 cut(s) 53, 135
EarI CTCTTC 2 cut(s) 53, 135
Eco81I CCTNAGG 1 cut(s) 186
FaeI CATG 2 cut(s) 113, 324
FaiI YATR 8 cut(s) 17, 41, 111, 174, 265, 287, 322, 339
FatI CATG 2 cut(s) 109, 320
FokI GGATG 2 cut(s) 203, 362
HaeIII GGCC 1 cut(s) 278
Hin1II CATG 2 cut(s) 113, 324
HphI GGTGA 1 cut(s) 209
Hpy188I TCNGA 1 cut(s) 7
HpyAV CCTTC 1 cut(s) 340
HpyCH4III ACNGT 1 cut(s) 133
HpyCH4V TGCA 2 cut(s) 224, 274
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 2 cut(s) 113, 324
Kzo9I GATC 1 cut(s) 307
LpnPI CCDG 2 cut(s) 198, 260
MalI GATC 1 cut(s) 309
MboI GATC 1 cut(s) 307
MboII GAAGA 4 cut(s) 70, 137, 149, 152
MluCI AATT 1 cut(s) 176
MmeI TCCRAC 1 cut(s) 51
MnlI CCTC 4 cut(s) 54, 85, 136, 181
MseI TTAA 2 cut(s) 179, 248
MslI CAYNNNNRTG 1 cut(s) 114
NdeII GATC 1 cut(s) 307
NlaIII CATG 2 cut(s) 113, 324
NspI RCATGY 1 cut(s) 113
PciI ACATGT 1 cut(s) 109
PscI ACATGT 1 cut(s) 109
RseI CAYNNNNRTG 1 cut(s) 114
SaqAI TTAA 2 cut(s) 179, 248
Sau3AI GATC 1 cut(s) 307
SetI ASST 2 cut(s) 147, 286
SgeI CNNG 6 cut(s) 122, 197, 287, 333, 338, 355
SmiMI CAYNNNNRTG 1 cut(s) 114
Sse9I AATT 1 cut(s) 176
TaaI ACNGT 1 cut(s) 133
TasI AATT 1 cut(s) 176
Tru1I TTAA 2 cut(s) 179, 248
Tru9I TTAA 2 cut(s) 179, 248
TscAI CASTG 1 cut(s) 226
TspDTI ATGAA 4 cut(s) 93, 189, 270, 302
TspRI CASTG 1 cut(s) 226
XceI RCATGY 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.