Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0005324

Physical Location & Seq

Genomic Coordinates Reverse (-)

29666900 .. 29673412

Gene Structure 6513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG264600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGGCTCTTTCACTTGGGTTGGGGAGTACAACGCCGCCGTCACCGCCACCGCCGATGTCGACGCCGCCGCCGCAGCTGCTGCTGCTCCGACGAGGAGGAGCAAGAGGCTGCACCGCCCCAAGAAGTTTGAGTTTCTCAGCTGGGGCTCGAGGCCGCTGATTGAATTTCTCGAGTCGATTGGGAAGGACACGACGAAGCAGATCTCCCAATACGACGTCGCTACGATTATCACCGACTACGTCAACCACCGCAGGCTTCTCCACCCGACGAAGAGGAAGAGGATCGTCTGCGACGACGGGCTTCATTCTCTGTTCGGCAGGAAGACCATTGCTCGGATCAAGATCTACGATTTGCTCCAGCCGCATTTCGCTGAGAATCTCGAGGACGATTCCGATGATTCGTCGGATGAGTCCGACGACGACGGTTTGGACGAGGAGGACGAGGATAAGCAGCGGCGGCAGCAGCAGCAGCAGAGGAAGAAGCAGCAGAAGAGGAGAGCCGCCTCGGCTCTGCATGCGCCTCCTCCGGTTCCGAAAAGCTGCTACGCCGCCGTGATTCCGGAGAATTTGAAGCTGGTGTACCTGAGGAGGTCGGTGGTGGAAGCTCTGCTGAAGCAGGGCGAGGCTCAGGTGTTTGAGGACAAAGTCGTGGGGAGCTTTGTGAGGACGAAATCGGACCCCAATGACTATCTGCAGAAGAATTCTCACCAGCTAATGCAGGTGAAGGCGATTCTGAAGAAGCCGGAGCCGAATTCGGAATCGTCTGCTGGAGGTGGAGTTCTTCTTCAGCTTCATGGGGCTGTTAGAGACTTCTCCGTTTCCATGCTCTCTGATGATAACTTCTTCCCGGAAGAATGTGAGGATTTACGTGAAAGAGTTAAAGGTGGTTTGCTGAAGAGACCTACAGTGGTGGAGCTTCAACAAAAGGTCCAGATCTTGCATCTGGATGTAACAAAGCATTGGCTTGTGAGAGAACTTCAATACTTACAGAACTCAATTGATCGAGCGAATGAAAAGGGATTGCGCCGAGAGCTGTTTGACTACTTGGAAAGAAGGGAACTGCTGCAGTCACCAGATGAACAAGCACGTCTTTTGCGAGAGGTTCCCGAAGTTATTGCAGAAGAATTAGAGGAAGAACCAAAAGATTCTCCAGATGAAACAGAACAAGGAAACCATGGCTCCCCAGGACATATCCTCAGGGGAGAATCAACTCCTATTTCTGAAGCATGCGAGGATGATGATTCTTTGCAGAAGTGGCAGAAGCAACCTGCAGAGTCTGTAAAAGAGATACTTGATGCAGAGGACAACAAGGCTTCTCAGCAACTTGTGGATAAGCATGTAGTGATATCTGAGGTAGTGGATGTAAGTGATGACGACGAAAGTGAAGAACCAGAATCTGAAGAAAAGTACGAGATTCCTATTCCCCAGCTGGGAACCTTAATGTGGCATTATTCCGATCCCCAAGGAAACATACAGGGTCCTTTCTCAATCATTTCCTTAAAGCGCTGGAGTGATTCTGACTACTTTCCTCCAGATTTCAAAATTTGGAAGACAGGTCAGAGTAGTAATGAAGCTGTATTATTGACCAAAATTCTTCGTGGGAATTTTCTAAATAAAAGTGTATACCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB

Protein Analysis

543

Amino Acids

61.86

Weight (kDa)

5.15

Isoelectric Point (pI)

65.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIB	PF02201	51 - 123	2.5e-09	SWIB/MDM2 domain
Plus-3	PF03126	189 - 293	4.8e-13	Plus-3 domain
NERD_plant	PF25980	316 - 364	1.5e-22	Plant NERD domain
GYF	PF02213	482 - 522	2.5e-12	GYF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08430 AT5G08430 AT5G23480 AT5G23480 AT5G23480 AT5G23480 AT5G23480 AT5G23480
fragaria_vesca	FvH4_1g25810 FvH4_1g25810 FvH4_1g25810
malus_domestica	MD15G1140400.v1.1
prunus_persica	Prupe.4G286800_v2.0.a1 Prupe.4G286800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0484911 RchiOBHm_Chr3g0484921
rosa_laevigata	RLG00000013602 RLG00000023186
rosa_multiflora	Rmu_sc0002231.1_g000024 Rmu_sc0005946.1_g000003 Rmu_sc0005946.1_g000004
rosa_roxburghii	Rroxscaffold_6G00397360
rosa_rugosa	Rorug03G0214200
rosa_samantha	Rh3AG264600 Rh3BG300100 Rh3CG297800 Rh3DG293900 Rh6CG195000
rosa_wichuraiana	Rw3G023650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	709
AatII	GACGTC	1 cut(s)	219
Acc36I	ACCTGC	2 cut(s)	709, 1276
AccI	GTMKAC	2 cut(s)	60, 1623
AccIII	TCCGGA	1 cut(s)	559
AclWI	GGATC	3 cut(s)	290, 344, 1451
AcsI	RAATTY	7 cut(s)	164, 565, 700, 751, 1542, 1590, 1603
AcuI	CTGAAG	6 cut(s)	632, 755, 770, 914, 1242, 1419
AcyI	GRCGYC	2 cut(s)	63, 216
AfaI	GTAC	3 cut(s)	29, 581, 1409
AfeI	AGCGCT	1 cut(s)	1505
AfiI	CCNNNNNNNGG	3 cut(s)	333, 1430, 1443
AgsI	TTSAA	5 cut(s)	164, 571, 920, 980, 1540
AjiI	CACGTC	1 cut(s)	1088
AjnI	CCWGG	1 cut(s)	1183
AloI	GAACNNNNNNTCC	2 cut(s)	762, 794
Alw26I	GTCTC	2 cut(s)	801, 892
AlwI	GGATC	3 cut(s)	290, 344, 1451
AlwNI	CAGNNNCTG	3 cut(s)	80, 1277, 1397
Ama87I	CYCGRG	3 cut(s)	148, 170, 380
Aor13HI	TCCGGA	1 cut(s)	559
Aor51HI	AGCGCT	1 cut(s)	1505
AoxI	GGCC	1 cut(s)	152
ApoI	RAATTY	7 cut(s)	164, 565, 700, 751, 1542, 1590, 1603
AspLEI	GCGC	3 cut(s)	520, 1026, 1506
AspS9I	GGNCC	3 cut(s)	676, 928, 1478
AsuC2I	CCSGG	1 cut(s)	848
AsuHPI	GGTGA	5 cut(s)	34, 223, 698, 733, 1062
AvaI	CYCGRG	3 cut(s)	148, 170, 380
AvaII	GGWCC	3 cut(s)	676, 928, 1478
AxyI	CCTNAGG	2 cut(s)	584, 1196
BanII	GRGCYC	2 cut(s)	8, 149
BarI	GAAGNNNNNNTAC	2 cut(s)	563, 595
BbsI	GAAGAC	2 cut(s)	329, 1556
BceAI	ACGGC	2 cut(s)	23, 536
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	1 cut(s)	1185
BcnI	CCSGG	1 cut(s)	848
BcoDI	GTCTC	2 cut(s)	801, 892
BfmI	CTRYAG	4 cut(s)	692, 903, 1064, 1269
BfoI	RGCGCY	1 cut(s)	1507
BfuAI	ACCTGC	2 cut(s)	709, 1276
BglI	GCCNNNNNGGC	1 cut(s)	506
BglII	AGATCT	3 cut(s)	201, 342, 933
Bme1390I	CCNGG	2 cut(s)	848, 1185
Bme18I	GGWCC	3 cut(s)	676, 928, 1478
BmeT110I	CYCGRG	3 cut(s)	148, 170, 380
BmgBI	CACGTC	1 cut(s)	1088
BmgT120I	GGNCC	3 cut(s)	676, 928, 1478
BmiI	GGNNCC	7 cut(s)	531, 678, 747, 1104, 1180, 1435, 1479
BmrFI	CCNGG	2 cut(s)	848, 1185
BmsI	GCATC	2 cut(s)	949, 1285
BpiI	GAAGAC	2 cut(s)	329, 1556
BpmI	CTGGAG	5 cut(s)	341, 789, 1134, 1515, 1528
Bpu10I	CCTNAGC	1 cut(s)	627
BpuMI	CCSGG	1 cut(s)	848
BsaAI	YACGTR	1 cut(s)	869
BsaBI	GATNNNNATC	1 cut(s)	341
BsaHI	GRCGYC	2 cut(s)	63, 216
BsaI	GGTCTC	1 cut(s)	892
BsaJI	CCNNGG	4 cut(s)	504, 1174, 1183, 1462
BsaWI	WCCGGW	2 cut(s)	526, 559
BsaXI	ACNNNNNCTCC	4 cut(s)	762, 792, 1163, 1193
Bsc4I	CCNNNNNNNGG	3 cut(s)	333, 1430, 1443
Bse21I	CCTNAGG	2 cut(s)	584, 1196
Bse3DI	GCAATG	1 cut(s)	327
Bse8I	GATNNNNATC	1 cut(s)	341
BseAI	TCCGGA	1 cut(s)	559
BseBI	CCWGG	1 cut(s)	1185
BseDI	CCNNGG	4 cut(s)	504, 1174, 1183, 1462
BseGI	GGATG	4 cut(s)	412, 952, 1240, 1366
BseJI	GATNNNNATC	1 cut(s)	341
BseLI	CCNNNNNNNGG	3 cut(s)	333, 1430, 1443
BseMI	GCAATG	1 cut(s)	327
BseMII	CTCAG	7 cut(s)	151, 363, 575, 641, 1210, 1331, 1341
BseRI	GAGGAG	6 cut(s)	109, 112, 449, 508, 513, 601
BseYI	CCCAGC	3 cut(s)	141, 1425, 1429
BsgI	GTGCAG	1 cut(s)	95
BshFI	GGCC	1 cut(s)	154
BsiHKCI	CYCGRG	3 cut(s)	148, 170, 380
BsiSI	CCGG	4 cut(s)	527, 560, 743, 848
BslI	CCNNNNNNNGG	3 cut(s)	333, 1430, 1443
BsmAI	GTCTC	2 cut(s)	801, 892
BsnI	GGCC	1 cut(s)	154
Bso31I	GGTCTC	1 cut(s)	892
BsoBI	CYCGRG	3 cut(s)	148, 170, 380
Bsp1286I	GDGCHC	2 cut(s)	8, 149
Bsp13I	TCCGGA	1 cut(s)	559
Bsp143I	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
Bsp19I	CCATGG	1 cut(s)	1174
BspANI	GGCC	1 cut(s)	154
BspCNI	CTCAG	7 cut(s)	150, 364, 576, 640, 1209, 1330, 1342
BspEI	TCCGGA	1 cut(s)	559
BspLI	GGNNCC	7 cut(s)	531, 678, 747, 1104, 1180, 1435, 1479
BspMAI	CTGCAG	3 cut(s)	696, 1068, 1273
BspMI	ACCTGC	2 cut(s)	709, 1276
BspPI	GGATC	3 cut(s)	290, 344, 1451
BspTNI	GGTCTC	1 cut(s)	892
BsrDI	GCAATG	1 cut(s)	327
BssECI	CCNNGG	4 cut(s)	504, 1174, 1183, 1462
BssMI	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
BssNAI	GTATAC	1 cut(s)	1624
BssNI	GRCGYC	2 cut(s)	63, 216
BssT1I	CCWWGG	2 cut(s)	1174, 1462
Bst1107I	GTATAC	1 cut(s)	1624
Bst2UI	CCWGG	1 cut(s)	1185
Bst4CI	ACNGT	2 cut(s)	425, 907
Bst6I	CTCTTC	4 cut(s)	266, 272, 485, 890
BstACI	GRCGYC	2 cut(s)	63, 216
BstAPI	GCANNNNNTGC	1 cut(s)	80
BstBAI	YACGTR	1 cut(s)	869
BstC8I	GCNNGC	3 cut(s)	254, 516, 1228
BstDEI	CTNAG	7 cut(s)	137, 372, 584, 627, 1196, 1317, 1350
BstDSI	CCRYGG	1 cut(s)	1174
BstF5I	GGATG	4 cut(s)	412, 952, 1240, 1366
BstH2I	RGCGCY	1 cut(s)	1507
BstHHI	GCGC	3 cut(s)	520, 1026, 1506
BstKTI	GATC	7 cut(s)	204, 285, 339, 345, 936, 1003, 1459
BstMAI	GTCTC	2 cut(s)	801, 892
BstMBI	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
BstNI	CCWGG	1 cut(s)	1185
BstNSI	RCATGY	3 cut(s)	518, 1230, 1340
BstSCI	CCNGG	2 cut(s)	846, 1183
BstSFI	CTRYAG	4 cut(s)	692, 903, 1064, 1269
BstV2I	GAAGAC	2 cut(s)	329, 1556
BstX2I	RGATCY	3 cut(s)	201, 342, 933
BstYI	RGATCY	3 cut(s)	201, 342, 933
BstZ17I	GTATAC	1 cut(s)	1624
Bsu36I	CCTNAGG	2 cut(s)	584, 1196
BsuRI	GGCC	1 cut(s)	154
BtgI	CCRYGG	1 cut(s)	1174
BtrI	CACGTC	1 cut(s)	1088
BtsCI	GGATG	4 cut(s)	412, 952, 1240, 1366
BtsIMutI	CAGTG	1 cut(s)	912
BveI	ACCTGC	2 cut(s)	709, 1276
Cac8I	GCNNGC	3 cut(s)	254, 516, 1228
CaiI	CAGNNNCTG	3 cut(s)	80, 1277, 1397
CfoI	GCGC	3 cut(s)	520, 1026, 1506
Cfr13I	GGNCC	3 cut(s)	676, 928, 1478
CseI	GACGC	1 cut(s)	71
Csp6I	GTAC	3 cut(s)	28, 580, 1408
CviAII	CATG	6 cut(s)	515, 794, 823, 1175, 1227, 1337
CviQI	GTAC	3 cut(s)	28, 580, 1408
DdeI	CTNAG	7 cut(s)	137, 372, 584, 627, 1196, 1317, 1350
DpnI	GATC	7 cut(s)	203, 284, 338, 344, 935, 1002, 1458
DpnII	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
Eam1104I	CTCTTC	4 cut(s)	266, 272, 485, 890
EarI	CTCTTC	4 cut(s)	266, 272, 485, 890
Eco130I	CCWWGG	2 cut(s)	1174, 1462
Eco24I	GRGCYC	2 cut(s)	8, 149
Eco31I	GGTCTC	1 cut(s)	892
Eco32I	GATATC	1 cut(s)	1347
Eco47I	GGWCC	3 cut(s)	676, 928, 1478
Eco47III	AGCGCT	1 cut(s)	1505
Eco57I	CTGAAG	6 cut(s)	632, 755, 770, 914, 1242, 1419
Eco81I	CCTNAGG	2 cut(s)	584, 1196
Eco88I	CYCGRG	3 cut(s)	148, 170, 380
EcoO109I	RGGNCCY	1 cut(s)	1478
EcoRI	GAATTC	2 cut(s)	700, 751
EcoRII	CCWGG	1 cut(s)	1183
EcoRV	GATATC	1 cut(s)	1347
EcoT14I	CCWWGG	2 cut(s)	1174, 1462
EcoT38I	GRGCYC	2 cut(s)	8, 149
ErhI	CCWWGG	2 cut(s)	1174, 1462
FaeI	CATG	6 cut(s)	518, 797, 826, 1178, 1230, 1340
FaiI	YATR	9 cut(s)	516, 795, 824, 1176, 1191, 1228, 1338, 1472, 1624
FalI	AAGNNNNNCTT	4 cut(s)	1074, 1106, 1275, 1307
FatI	CATG	6 cut(s)	514, 793, 822, 1174, 1226, 1336
FblI	GTMKAC	2 cut(s)	60, 1623
FokI	GGATG	4 cut(s)	419, 959, 1247, 1373
FriOI	GRGCYC	2 cut(s)	8, 149
GlaI	GCGC	3 cut(s)	519, 1025, 1505
GsaI	CCCAGC	3 cut(s)	145, 1429, 1433
GsuI	CTGGAG	5 cut(s)	341, 789, 1134, 1515, 1528
HaeII	RGCGCY	1 cut(s)	1507
HaeIII	GGCC	1 cut(s)	154
HapII	CCGG	4 cut(s)	527, 560, 743, 848
HgaI	GACGC	1 cut(s)	71
HhaI	GCGC	3 cut(s)	520, 1026, 1506
Hin1I	GRCGYC	2 cut(s)	63, 216
Hin1II	CATG	6 cut(s)	518, 797, 826, 1178, 1230, 1340
Hin6I	GCGC	3 cut(s)	518, 1024, 1504
HinP1I	GCGC	3 cut(s)	518, 1024, 1504
HincII	GTYRAC	2 cut(s)	61, 244
HindII	GTYRAC	2 cut(s)	61, 244
HpaII	CCGG	4 cut(s)	527, 560, 743, 848
HphI	GGTGA	5 cut(s)	34, 223, 698, 733, 1062
Hpy166II	GTNNAC	4 cut(s)	61, 244, 580, 1624
Hpy188III	TCNNGA	9 cut(s)	170, 340, 380, 560, 931, 944, 1106, 1151, 1532
Hpy8I	GTNNAC	4 cut(s)	61, 244, 580, 1624
HpyAV	CCTTC	3 cut(s)	178, 718, 1047
HpyCH4III	ACNGT	2 cut(s)	425, 907
HpyCH4IV	ACGT	4 cut(s)	216, 240, 868, 1087
HpyF3I	CTNAG	7 cut(s)	137, 372, 584, 627, 1196, 1317, 1350
HpySE526I	ACGT	4 cut(s)	216, 240, 868, 1087
Hsp92I	GRCGYC	2 cut(s)	63, 216
Hsp92II	CATG	6 cut(s)	518, 797, 826, 1178, 1230, 1340
HspAI	GCGC	3 cut(s)	518, 1024, 1504
Kpn2I	TCCGGA	1 cut(s)	559
Kzo9I	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
LmnI	GCTCC	7 cut(s)	91, 99, 360, 654, 745, 913, 1184
LweI	GCATC	2 cut(s)	949, 1285
MaeII	ACGT	4 cut(s)	216, 240, 868, 1087
MaeIII	GTNAC	3 cut(s)	40, 949, 1068
MalI	GATC	7 cut(s)	203, 284, 338, 344, 935, 1002, 1458
MboI	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	3 cut(s)	201, 342, 933
MhlI	GDGCHC	2 cut(s)	8, 149
MluCI	AATT	9 cut(s)	164, 565, 700, 751, 996, 1124, 1542, 1590, 1603
MlyI	GAGTC	3 cut(s)	182, 419, 1283
MmeI	TCCRAC	3 cut(s)	113, 384, 438
MroI	TCCGGA	1 cut(s)	559
MseI	TTAA	3 cut(s)	879, 1439, 1499
MslI	CAYNNNNRTG	1 cut(s)	945
MspA1I	CMGCKG	5 cut(s)	77, 141, 157, 454, 1429
MspI	CCGG	4 cut(s)	527, 560, 743, 848
MspR9I	CCNGG	2 cut(s)	848, 1185
MunI	CAATTG	1 cut(s)	996
MvaI	CCWGG	1 cut(s)	1185
NciI	CCSGG	1 cut(s)	848
NcoI	CCATGG	1 cut(s)	1174
NdeII	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
NlaIII	CATG	6 cut(s)	518, 797, 826, 1178, 1230, 1340
NlaIV	GGNNCC	7 cut(s)	531, 678, 747, 1104, 1180, 1435, 1479
NmeAIII	GCCGAG	2 cut(s)	485, 1052
NmuCI	GTSAC	2 cut(s)	40, 1068
NspI	RCATGY	3 cut(s)	518, 1230, 1340
PaeI	GCATGC	2 cut(s)	518, 1230
PaeR7I	CTCGAG	3 cut(s)	148, 170, 380
PaqCI	CACCTGC	1 cut(s)	709
PcsI	WCGNNNNNNNCGW	4 cut(s)	291, 429, 438, 1093
PflFI	GACNNNGTC	2 cut(s)	239, 644
PfoI	TCCNGGA	1 cut(s)	846
PleI	GAGTC	3 cut(s)	181, 418, 1282
PpsI	GAGTC	3 cut(s)	181, 418, 1282
Ppu21I	YACGTR	1 cut(s)	869
PpuMI	RGGWCCY	1 cut(s)	1478
Psp5II	RGGWCCY	1 cut(s)	1478
Psp6I	CCWGG	1 cut(s)	1183
PspFI	CCCAGC	3 cut(s)	141, 1425, 1429
PspGI	CCWGG	1 cut(s)	1183
PspN4I	GGNNCC	7 cut(s)	531, 678, 747, 1104, 1180, 1435, 1479
PspPI	GGNCC	3 cut(s)	676, 928, 1478
PspPPI	RGGWCCY	1 cut(s)	1478
PspXI	VCTCGAGB	1 cut(s)	148
PstI	CTGCAG	3 cut(s)	696, 1068, 1273
PstNI	CAGNNNCTG	3 cut(s)	80, 1277, 1397
PsuI	RGATCY	3 cut(s)	201, 342, 933
PsyI	GACNNNGTC	2 cut(s)	239, 644
PvuII	CAGCTG	3 cut(s)	77, 141, 1429
RsaI	GTAC	3 cut(s)	29, 581, 1409
RsaNI	GTAC	3 cut(s)	28, 580, 1408
RseI	CAYNNNNRTG	1 cut(s)	945
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	3 cut(s)	879, 1439, 1499
Sau3AI	GATC	7 cut(s)	201, 282, 336, 342, 933, 1000, 1456
Sau96I	GGNCC	3 cut(s)	676, 928, 1478
SchI	GAGTC	3 cut(s)	182, 419, 1283
ScrFI	CCNGG	2 cut(s)	848, 1185
SduI	GDGCHC	2 cut(s)	8, 149
SfaNI	GCATC	2 cut(s)	949, 1285
SfcI	CTRYAG	4 cut(s)	692, 903, 1064, 1269
Sfr274I	CTCGAG	3 cut(s)	148, 170, 380
SinI	GGWCC	3 cut(s)	676, 928, 1478
SlaI	CTCGAG	3 cut(s)	148, 170, 380
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	3 cut(s)	148, 170, 380
SmoI	CTYRAG	3 cut(s)	148, 170, 380
SphI	GCATGC	2 cut(s)	518, 1230
Sse9I	AATT	9 cut(s)	164, 565, 700, 751, 996, 1124, 1542, 1590, 1603
StyD4I	CCNGG	2 cut(s)	846, 1183
StyI	CCWWGG	2 cut(s)	1174, 1462
TaaI	ACNGT	2 cut(s)	425, 907
TaiI	ACGT	4 cut(s)	219, 243, 871, 1090
TaqI	TCGA	6 cut(s)	60, 149, 171, 176, 381, 1003
TasI	AATT	9 cut(s)	164, 565, 700, 751, 996, 1124, 1542, 1590, 1603
TatI	WGTACW	1 cut(s)	27
Tru1I	TTAA	3 cut(s)	879, 1439, 1499
Tru9I	TTAA	3 cut(s)	879, 1439, 1499
TscAI	CASTG	1 cut(s)	912
TseFI	GTSAC	2 cut(s)	40, 1068
Tsp45I	GTSAC	2 cut(s)	40, 1068
TspDTI	ATGAA	6 cut(s)	293, 782, 1026, 1092, 1170, 1584
TspGWI	ACGGA	1 cut(s)	805
TspRI	CASTG	1 cut(s)	912
Tth111I	GACNNNGTC	2 cut(s)	239, 644
VpaK11BI	GGWCC	3 cut(s)	676, 928, 1478
XapI	RAATTY	7 cut(s)	164, 565, 700, 751, 1542, 1590, 1603
XceI	RCATGY	3 cut(s)	518, 1230, 1340
XhoI	CTCGAG	3 cut(s)	148, 170, 380
XmiI	GTMKAC	2 cut(s)	60, 1623
ZraI	GACGTC	1 cut(s)	217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.