Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0005324

Physical Location & Seq

Genomic Coordinates Reverse (-)

30503547 .. 30510061

Gene Structure 6515 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG293900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGCTCTTTCACTTGGGTTGGGGAGTACAACGCGGCCGTCATCGCGACCGCCGATGTCGACGCCGCCGCCGCCGCCGCGGCTGCTGCTCCGACGAGGAGGAGCAAGAGGCTTCACCGCCCCAAGAAGTTTGAGTTTCTCAGCTGGGGCTCGAGGCCGCTGATTGAATTTCTCGAGTCGATTGGGAAGGACACGACGAAGCAGATCTCCCAATACGACGTCGCTACGATTATCACCGACTACGTCAACCACCGCAGGCTTCTCCACCCGACGAAGAGGAAGAGGATCGTCTGCGACGAGGGGCTTCATTCTCTGTTCGGCAGGAAGACCATTTCTCGGATCAAGATCTACGATTTGCTCCAGCCGCATTTCGCTGAGAATCTCGAGGACGATTCCGATGATTCGTCGGATGAGTCCGACGACGACGGTTTGGACGAGGAGGACGAGGATAAGCAGCGGCGGCAGCAGCAGCAGCAGCAGAGGAAGAAGCAGCAGAAGAGGAGAGCCGCCGCGGCTCTGCATGCGCCTCCTCCGGTTCCGAAGAGCTGCTACGCCGCCGTGATTCCGGAGAATTTGAAGCTGGTGTACCTGAGGAGGTCGGTGGTGGAAGCTCTGCTGAAGCAGGACGAGGCTCAGGTGTTTGAGGACAAAGTCGTGGGGAGCTTTGTGAGGACGAAATCGGACCCCAATGACTATCTGCAGAAGAATTCTCACCAGCTAATGCAGGTGAAGGCGATTCTGAAGAAGCCGAATTCGAATTCGGAATCGTCTGCTGGAGGTGGAGTTCTTCTTCAGCTTCATGGGGCTGTTAGGGACTTCTCCATTTCCATGCTCTCTGATGATAACTTCTTCCCGGAAGAATGTGAGGATTTACGTGAAAGAGTTAAAGGTGGTTTGCTGAAGAGACCGACAGTGGTGGAGCTTCAACAAAAGGTCCAGATTTTGCATCTGGATGTAACAAAGCATTGGCTTGTGAGAGAACTTCAATACTTACAGAACTCAATTGATCGAGCGAATGAAAAGGGATTGCGCCGAGAGCTGTTTGACTACTTGGAAAGAAGGGAACTGCTGCAGTCTCCAGATGAACAAGCACGTCTTTTGCGAGAGGTTCCCGAAGTTATTGCAGAAGAATTAGAGGAAGAACCAAAAGATTCTCCAGATGAAACAGAACAAGGAAACCATGGCTCCCCAGGACATATCCTCAGGGGAGAATCAACTCCTATTTCTGAAGGTGCGTCATCGATAAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB

Protein Analysis

417

Amino Acids

47.35

Weight (kDa)

5.83

Isoelectric Point (pI)

64.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIB	PF02201	52 - 124	9.6e-10	SWIB/MDM2 domain
Plus-3	PF03126	191 - 295	4.6e-14	Plus-3 domain
NERD_plant	PF25980	318 - 366	1.1e-22	Plant NERD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08430 AT5G08430 AT5G23480 AT5G23480 AT5G23480 AT5G23480 AT5G23480 AT5G23480
fragaria_vesca	FvH4_1g25810 FvH4_1g25810 FvH4_1g25810
malus_domestica	MD15G1140400.v1.1
prunus_persica	Prupe.4G286800_v2.0.a1 Prupe.4G286800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0484911 RchiOBHm_Chr3g0484921
rosa_laevigata	RLG00000013602 RLG00000023186
rosa_multiflora	Rmu_sc0002231.1_g000024 Rmu_sc0005946.1_g000003 Rmu_sc0005946.1_g000004
rosa_roxburghii	Rroxscaffold_6G00397360
rosa_rugosa	Rorug03G0214200
rosa_samantha	Rh3AG264600 Rh3BG300100 Rh3CG297800 Rh3DG293900 Rh6CG195000
rosa_wichuraiana	Rw3G023650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	715
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	715
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	4 cut(s)	35, 47, 80, 512
AccIII	TCCGGA	1 cut(s)	565
AclWI	GGATC	2 cut(s)	293, 347
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	5 cut(s)	167, 571, 706, 751, 757
AcuI	CTGAAG	5 cut(s)	638, 761, 776, 920, 1248
AcyI	GRCGYC	2 cut(s)	63, 219
AfaI	GTAC	2 cut(s)	29, 587
AfiI	CCNNNNNNNGG	1 cut(s)	336
AgsI	TTSAA	4 cut(s)	167, 577, 926, 986
AjiI	CACGTC	1 cut(s)	1094
AjnI	CCWGG	1 cut(s)	1189
AloI	GAACNNNNNNTCC	2 cut(s)	768, 800
AluBI	AGCT	9 cut(s)	144, 546, 580, 611, 663, 718, 796, 922, 1039
AluI	AGCT	9 cut(s)	144, 546, 580, 611, 663, 718, 796, 922, 1039
Alw26I	GTCTC	2 cut(s)	898, 1080
AlwI	GGATC	2 cut(s)	293, 347
Ama87I	CYCGRG	3 cut(s)	151, 173, 383
Aor13HI	TCCGGA	1 cut(s)	565
AoxI	GGCC	2 cut(s)	36, 155
ApoI	RAATTY	5 cut(s)	167, 571, 706, 751, 757
AspLEI	GCGC	2 cut(s)	526, 1032
AspS9I	GGNCC	2 cut(s)	682, 934
AsuC2I	CCSGG	1 cut(s)	854
AsuHPI	GGTGA	4 cut(s)	107, 226, 704, 739
AsuII	TTCGAA	1 cut(s)	755
AvaI	CYCGRG	3 cut(s)	151, 173, 383
AvaII	GGWCC	2 cut(s)	682, 934
AxyI	CCTNAGG	2 cut(s)	590, 1202
BanII	GRGCYC	2 cut(s)	8, 152
BarI	GAAGNNNNNNTAC	4 cut(s)	533, 565, 569, 601
BbsI	GAAGAC	1 cut(s)	332
BceAI	ACGGC	2 cut(s)	23, 542
BcgI	CGANNNNNNTGC	2 cut(s)	1103, 1137
BciT130I	CCWGG	1 cut(s)	1191
BcnI	CCSGG	1 cut(s)	854
BcoDI	GTCTC	2 cut(s)	898, 1080
BfmI	CTRYAG	2 cut(s)	698, 1070
BfuAI	ACCTGC	1 cut(s)	715
BglI	GCCNNNNNGGC	2 cut(s)	80, 512
BglII	AGATCT	2 cut(s)	204, 345
Bme1390I	CCNGG	2 cut(s)	854, 1191
Bme18I	GGWCC	2 cut(s)	682, 934
BmeT110I	CYCGRG	3 cut(s)	151, 173, 383
BmgBI	CACGTC	1 cut(s)	1094
BmgT120I	GGNCC	2 cut(s)	682, 934
BmiI	GGNNCC	4 cut(s)	537, 684, 1110, 1186
BmrFI	CCNGG	2 cut(s)	854, 1191
BmsI	GCATC	1 cut(s)	955
BpiI	GAAGAC	1 cut(s)	332
BpmI	CTGGAG	4 cut(s)	344, 795, 1062, 1140
Bpu10I	CCTNAGC	1 cut(s)	633
Bpu14I	TTCGAA	1 cut(s)	755
BpuMI	CCSGG	1 cut(s)	854
Bsa29I	ATCGAT	1 cut(s)	1241
BsaAI	YACGTR	1 cut(s)	875
BsaBI	GATNNNNATC	1 cut(s)	344
BsaHI	GRCGYC	2 cut(s)	63, 219
BsaI	GGTCTC	1 cut(s)	898
BsaJI	CCNNGG	4 cut(s)	78, 510, 1180, 1189
BsaWI	WCCGGW	2 cut(s)	532, 565
BsaXI	ACNNNNNCTCC	4 cut(s)	768, 798, 1169, 1199
Bsc4I	CCNNNNNNNGG	1 cut(s)	336
Bse21I	CCTNAGG	2 cut(s)	590, 1202
Bse8I	GATNNNNATC	1 cut(s)	344
BseAI	TCCGGA	1 cut(s)	565
BseBI	CCWGG	1 cut(s)	1191
BseCI	ATCGAT	1 cut(s)	1241
BseDI	CCNNGG	4 cut(s)	78, 510, 1180, 1189
BseGI	GGATG	2 cut(s)	415, 958
BseJI	GATNNNNATC	1 cut(s)	344
BseLI	CCNNNNNNNGG	1 cut(s)	336
BseMII	CTCAG	5 cut(s)	154, 366, 581, 647, 1216
BseRI	GAGGAG	6 cut(s)	112, 115, 452, 514, 519, 607
BseX3I	CGGCCG	1 cut(s)	36
BseYI	CCCAGC	1 cut(s)	144
Bsh1236I	CGCG	4 cut(s)	35, 47, 80, 512
Bsh1285I	CGRYCG	2 cut(s)	39, 51
BshFI	GGCC	2 cut(s)	38, 157
BshVI	ATCGAT	1 cut(s)	1241
BsiEI	CGRYCG	2 cut(s)	39, 51
BsiHKCI	CYCGRG	3 cut(s)	151, 173, 383
BsiSI	CCGG	3 cut(s)	533, 566, 854
BslFI	GGGAC	1 cut(s)	827
BslI	CCNNNNNNNGG	1 cut(s)	336
BsmAI	GTCTC	2 cut(s)	898, 1080
BsmFI	GGGAC	1 cut(s)	827
BsnI	GGCC	2 cut(s)	38, 157
Bso31I	GGTCTC	1 cut(s)	898
BsoBI	CYCGRG	3 cut(s)	151, 173, 383
Bsp119I	TTCGAA	1 cut(s)	755
Bsp1286I	GDGCHC	2 cut(s)	8, 152
Bsp13I	TCCGGA	1 cut(s)	565
Bsp143I	GATC	5 cut(s)	204, 285, 339, 345, 1006
Bsp19I	CCATGG	1 cut(s)	1180
Bsp68I	TCGCGA	1 cut(s)	47
BspANI	GGCC	2 cut(s)	38, 157
BspCNI	CTCAG	5 cut(s)	153, 367, 582, 646, 1215
BspDI	ATCGAT	1 cut(s)	1241
BspEI	TCCGGA	1 cut(s)	565
BspFNI	CGCG	4 cut(s)	35, 47, 80, 512
BspLI	GGNNCC	4 cut(s)	537, 684, 1110, 1186
BspMAI	CTGCAG	2 cut(s)	702, 1074
BspMI	ACCTGC	1 cut(s)	715
BspPI	GGATC	2 cut(s)	293, 347
BspQI	GCTCTTC	1 cut(s)	536
BspT104I	TTCGAA	1 cut(s)	755
BspTNI	GGTCTC	1 cut(s)	898
BssECI	CCNNGG	4 cut(s)	78, 510, 1180, 1189
BssMI	GATC	5 cut(s)	204, 285, 339, 345, 1006
BssNI	GRCGYC	2 cut(s)	63, 219
BssT1I	CCWWGG	1 cut(s)	1180
Bst2UI	CCWGG	1 cut(s)	1191
Bst4CI	ACNGT	2 cut(s)	428, 913
Bst6I	CTCTTC	5 cut(s)	269, 275, 491, 536, 896
BstACI	GRCGYC	2 cut(s)	63, 219
BstBAI	YACGTR	1 cut(s)	875
BstBI	TTCGAA	1 cut(s)	755
BstC8I	GCNNGC	2 cut(s)	257, 522
BstDEI	CTNAG	5 cut(s)	140, 375, 590, 633, 1202
BstDSI	CCRYGG	3 cut(s)	78, 510, 1180
BstF5I	GGATG	2 cut(s)	415, 958
BstFNI	CGCG	4 cut(s)	35, 47, 80, 512
BstHHI	GCGC	2 cut(s)	526, 1032
BstKTI	GATC	5 cut(s)	207, 288, 342, 348, 1009
BstMAI	GTCTC	2 cut(s)	898, 1080
BstMBI	GATC	5 cut(s)	204, 285, 339, 345, 1006
BstMCI	CGRYCG	2 cut(s)	39, 51
BstNI	CCWGG	1 cut(s)	1191
BstNSI	RCATGY	1 cut(s)	524
BstSCI	CCNGG	2 cut(s)	852, 1189
BstSFI	CTRYAG	2 cut(s)	698, 1070
BstUI	CGCG	4 cut(s)	35, 47, 80, 512
BstV2I	GAAGAC	1 cut(s)	332
BstX2I	RGATCY	2 cut(s)	204, 345
BstYI	RGATCY	2 cut(s)	204, 345
BstZI	CGGCCG	1 cut(s)	36
Bsu15I	ATCGAT	1 cut(s)	1241
Bsu36I	CCTNAGG	2 cut(s)	590, 1202
BsuRI	GGCC	2 cut(s)	38, 157
BsuTUI	ATCGAT	1 cut(s)	1241
BtgI	CCRYGG	3 cut(s)	78, 510, 1180
BtgZI	GCGATG	1 cut(s)	28
BtrI	CACGTC	1 cut(s)	1094
BtsCI	GGATG	2 cut(s)	415, 958
BtsIMutI	CAGTG	1 cut(s)	918
BtuMI	TCGCGA	1 cut(s)	47
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	2 cut(s)	257, 522
CfoI	GCGC	2 cut(s)	526, 1032
Cfr13I	GGNCC	2 cut(s)	682, 934
Cfr42I	CCGCGG	2 cut(s)	81, 513
ClaI	ATCGAT	1 cut(s)	1241
CseI	GACGC	2 cut(s)	71, 1224
Csp6I	GTAC	2 cut(s)	28, 586
CviAII	CATG	4 cut(s)	521, 800, 829, 1181
CviQI	GTAC	2 cut(s)	28, 586
DdeI	CTNAG	5 cut(s)	140, 375, 590, 633, 1202
DpnI	GATC	5 cut(s)	206, 287, 341, 347, 1008
DpnII	GATC	5 cut(s)	204, 285, 339, 345, 1006
EaeI	YGGCCR	1 cut(s)	36
EagI	CGGCCG	1 cut(s)	36
Eam1104I	CTCTTC	5 cut(s)	269, 275, 491, 536, 896
EarI	CTCTTC	5 cut(s)	269, 275, 491, 536, 896
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	1 cut(s)	1180
Eco24I	GRGCYC	2 cut(s)	8, 152
Eco31I	GGTCTC	1 cut(s)	898
Eco47I	GGWCC	2 cut(s)	682, 934
Eco52I	CGGCCG	1 cut(s)	36
Eco57I	CTGAAG	5 cut(s)	638, 761, 776, 920, 1248
Eco81I	CCTNAGG	2 cut(s)	590, 1202
Eco88I	CYCGRG	3 cut(s)	151, 173, 383
EcoRI	GAATTC	3 cut(s)	706, 751, 757
EcoRII	CCWGG	1 cut(s)	1189
EcoT14I	CCWWGG	1 cut(s)	1180
EcoT38I	GRGCYC	2 cut(s)	8, 152
ErhI	CCWWGG	1 cut(s)	1180
FaeI	CATG	4 cut(s)	524, 803, 832, 1184
FaiI	YATR	5 cut(s)	522, 801, 830, 1182, 1197
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	1 cut(s)	827
FatI	CATG	4 cut(s)	520, 799, 828, 1180
FblI	GTMKAC	1 cut(s)	60
FokI	GGATG	2 cut(s)	422, 965
FriOI	GRGCYC	2 cut(s)	8, 152
GlaI	GCGC	2 cut(s)	525, 1031
GsaI	CCCAGC	1 cut(s)	148
GsuI	CTGGAG	4 cut(s)	344, 795, 1062, 1140
HaeIII	GGCC	2 cut(s)	38, 157
HapII	CCGG	3 cut(s)	533, 566, 854
HgaI	GACGC	2 cut(s)	71, 1224
HhaI	GCGC	2 cut(s)	526, 1032
Hin1I	GRCGYC	2 cut(s)	63, 219
Hin1II	CATG	4 cut(s)	524, 803, 832, 1184
Hin6I	GCGC	2 cut(s)	524, 1030
HinP1I	GCGC	2 cut(s)	524, 1030
HincII	GTYRAC	2 cut(s)	61, 247
HindII	GTYRAC	2 cut(s)	61, 247
HpaII	CCGG	3 cut(s)	533, 566, 854
HphI	GGTGA	4 cut(s)	107, 226, 704, 739
Hpy166II	GTNNAC	3 cut(s)	61, 247, 586
Hpy8I	GTNNAC	3 cut(s)	61, 247, 586
HpyAV	CCTTC	4 cut(s)	181, 724, 1053, 1223
HpyCH4III	ACNGT	2 cut(s)	428, 913
HpyCH4IV	ACGT	4 cut(s)	219, 243, 874, 1093
HpyCH4V	TGCA	6 cut(s)	520, 700, 724, 946, 1072, 1124
HpyF3I	CTNAG	5 cut(s)	140, 375, 590, 633, 1202
HpySE526I	ACGT	4 cut(s)	219, 243, 874, 1093
Hsp92I	GRCGYC	2 cut(s)	63, 219
Hsp92II	CATG	4 cut(s)	524, 803, 832, 1184
HspAI	GCGC	2 cut(s)	524, 1030
Kpn2I	TCCGGA	1 cut(s)	565
KspI	CCGCGG	2 cut(s)	81, 513
Kzo9I	GATC	5 cut(s)	204, 285, 339, 345, 1006
LguI	GCTCTTC	1 cut(s)	536
LmnI	GCTCC	6 cut(s)	94, 102, 363, 660, 919, 1190
LweI	GCATC	1 cut(s)	955
MaeII	ACGT	4 cut(s)	219, 243, 874, 1093
MaeIII	GTNAC	1 cut(s)	955
MalI	GATC	5 cut(s)	206, 287, 341, 347, 1008
MboI	GATC	5 cut(s)	204, 285, 339, 345, 1006
MfeI	CAATTG	1 cut(s)	1002
MflI	RGATCY	2 cut(s)	204, 345
MhlI	GDGCHC	2 cut(s)	8, 152
MluCI	AATT	7 cut(s)	167, 571, 706, 751, 757, 1002, 1130
MlyI	GAGTC	2 cut(s)	185, 422
MmeI	TCCRAC	3 cut(s)	116, 387, 441
MroI	TCCGGA	1 cut(s)	565
MseI	TTAA	1 cut(s)	885
MslI	CAYNNNNRTG	2 cut(s)	827, 951
MspA1I	CMGCKG	5 cut(s)	80, 144, 160, 457, 512
MspI	CCGG	3 cut(s)	533, 566, 854
MspR9I	CCNGG	2 cut(s)	854, 1191
MunI	CAATTG	1 cut(s)	1002
MvaI	CCWGG	1 cut(s)	1191
MvnI	CGCG	4 cut(s)	35, 47, 80, 512
NciI	CCSGG	1 cut(s)	854
NcoI	CCATGG	1 cut(s)	1180
NdeII	GATC	5 cut(s)	204, 285, 339, 345, 1006
NlaIII	CATG	4 cut(s)	524, 803, 832, 1184
NlaIV	GGNNCC	4 cut(s)	537, 684, 1110, 1186
NmeAIII	GCCGAG	1 cut(s)	1058
NruI	TCGCGA	1 cut(s)	47
NspI	RCATGY	1 cut(s)	524
NspV	TTCGAA	1 cut(s)	755
PaeI	GCATGC	1 cut(s)	524
PaeR7I	CTCGAG	3 cut(s)	151, 173, 383
PaqCI	CACCTGC	1 cut(s)	715
PciSI	GCTCTTC	1 cut(s)	536
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 294, 432, 441, 1099
PfeI	GAWTC	8 cut(s)	379, 392, 401, 562, 736, 764, 1151, 1211
PflFI	GACNNNGTC	2 cut(s)	242, 650
PfoI	TCCNGGA	1 cut(s)	852
PleI	GAGTC	2 cut(s)	184, 421
PpsI	GAGTC	2 cut(s)	184, 421
Ppu21I	YACGTR	1 cut(s)	875
Psp6I	CCWGG	1 cut(s)	1189
PspFI	CCCAGC	1 cut(s)	144
PspGI	CCWGG	1 cut(s)	1189
PspN4I	GGNNCC	4 cut(s)	537, 684, 1110, 1186
PspPI	GGNCC	2 cut(s)	682, 934
PspXI	VCTCGAGB	1 cut(s)	151
PstI	CTGCAG	2 cut(s)	702, 1074
PsuI	RGATCY	2 cut(s)	204, 345
PsyI	GACNNNGTC	2 cut(s)	242, 650
PvuII	CAGCTG	1 cut(s)	144
RruI	TCGCGA	1 cut(s)	47
RsaI	GTAC	2 cut(s)	29, 587
RsaNI	GTAC	2 cut(s)	28, 586
RseI	CAYNNNNRTG	2 cut(s)	827, 951
SacII	CCGCGG	2 cut(s)	81, 513
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	536
SaqAI	TTAA	1 cut(s)	885
Sau3AI	GATC	5 cut(s)	204, 285, 339, 345, 1006
Sau96I	GGNCC	2 cut(s)	682, 934
SchI	GAGTC	2 cut(s)	185, 422
ScrFI	CCNGG	2 cut(s)	854, 1191
SduI	GDGCHC	2 cut(s)	8, 152
SfaNI	GCATC	1 cut(s)	955
SfcI	CTRYAG	2 cut(s)	698, 1070
Sfr274I	CTCGAG	3 cut(s)	151, 173, 383
Sfr303I	CCGCGG	2 cut(s)	81, 513
SfuI	TTCGAA	1 cut(s)	755
SgrBI	CCGCGG	2 cut(s)	81, 513
SinI	GGWCC	2 cut(s)	682, 934
SlaI	CTCGAG	3 cut(s)	151, 173, 383
SmiMI	CAYNNNNRTG	2 cut(s)	827, 951
SmlI	CTYRAG	3 cut(s)	151, 173, 383
SmoI	CTYRAG	3 cut(s)	151, 173, 383
SphI	GCATGC	1 cut(s)	524
Sse9I	AATT	7 cut(s)	167, 571, 706, 751, 757, 1002, 1130
StyD4I	CCNGG	2 cut(s)	852, 1189
StyI	CCWWGG	1 cut(s)	1180
TaaI	ACNGT	2 cut(s)	428, 913
TaiI	ACGT	4 cut(s)	222, 246, 877, 1096
TaqI	TCGA	8 cut(s)	60, 152, 174, 179, 384, 755, 1009, 1241
TaqII	GACCGA	1 cut(s)	922
TasI	AATT	7 cut(s)	167, 571, 706, 751, 757, 1002, 1130
TatI	WGTACW	1 cut(s)	27
TfiI	GAWTC	8 cut(s)	379, 392, 401, 562, 736, 764, 1151, 1211
Tru1I	TTAA	1 cut(s)	885
Tru9I	TTAA	1 cut(s)	885
TscAI	CASTG	1 cut(s)	918
TspDTI	ATGAA	5 cut(s)	296, 788, 1032, 1098, 1176
TspRI	CASTG	1 cut(s)	918
Tth111I	GACNNNGTC	2 cut(s)	242, 650
VpaK11BI	GGWCC	2 cut(s)	682, 934
XapI	RAATTY	5 cut(s)	167, 571, 706, 751, 757
XceI	RCATGY	1 cut(s)	524
XhoI	CTCGAG	3 cut(s)	151, 173, 383
XmiI	GTMKAC	1 cut(s)	60
ZraI	GACGTC	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.