Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03560 AT5G03560 AT5G03560 |
| fragaria_vesca | FvH4_6g08960 |
| malus_domestica | MD04G1183300.v1.1 MD12G1196700.v1.1 |
| prunus_persica | Prupe.6G301800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0459231 |
| rosa_laevigata | RLG00000025101 |
| rosa_multiflora | Rmu_co8389667.1_g000001 Rmu_sc0002435.1_g000010 Rmu_sc0002435.1_g000012 Rmu_sc0015160.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00420390 |
| rosa_rugosa | Rorug03G0034400.1 |
| rosa_samantha | Rh3BG095200 Rh3BG301800 Rh3CG096400 Rh3DG096100 Rh4AG222500 |
| rosa_wichuraiana | Rw3G007940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 410 |
| Acc36I | ACCTGC | 1 cut(s) | 153 |
| AccB1I | GGYRCC | 2 cut(s) | 608, 971 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 811 |
| AccI | GTMKAC | 2 cut(s) | 678, 711 |
| AccII | CGCG | 1 cut(s) | 885 |
| AciI | CCGC | 7 cut(s) | 6, 179, 543, 564, 567, 624, 893 |
| AclWI | GGATC | 1 cut(s) | 1050 |
| AcoI | YGGCCR | 2 cut(s) | 3, 663 |
| AcsI | RAATTY | 1 cut(s) | 1083 |
| AcuI | CTGAAG | 1 cut(s) | 190 |
| AcyI | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| AfaI | GTAC | 1 cut(s) | 965 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 811 |
| AgsI | TTSAA | 2 cut(s) | 343, 1090 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 307, 454 |
| AhlI | ACTAGT | 1 cut(s) | 796 |
| AjiI | CACGTC | 1 cut(s) | 529 |
| AjnI | CCWGG | 1 cut(s) | 915 |
| Alw21I | GWGCWC | 1 cut(s) | 492 |
| Alw26I | GTCTC | 2 cut(s) | 171, 809 |
| AlwI | GGATC | 1 cut(s) | 1050 |
| AoxI | GGCC | 9 cut(s) | 3, 466, 480, 514, 534, 555, 663, 769, 874 |
| ApaI | GGGCCC | 1 cut(s) | 773 |
| ApeKI | GCWGC | 1 cut(s) | 890 |
| ApoI | RAATTY | 1 cut(s) | 1083 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 290, 322 |
| AspLEI | GCGC | 4 cut(s) | 411, 611, 885, 974 |
| AspS9I | GGNCC | 4 cut(s) | 514, 535, 769, 770 |
| AsuC2I | CCSGG | 1 cut(s) | 773 |
| AsuHPI | GGTGA | 6 cut(s) | 58, 463, 595, 754, 949, 1043 |
| BaeGI | GKGCMC | 2 cut(s) | 662, 773 |
| BanI | GGYRCC | 2 cut(s) | 608, 971 |
| BanII | GRGCYC | 3 cut(s) | 423, 492, 773 |
| BauI | CACGAG | 2 cut(s) | 476, 878 |
| BbsI | GAAGAC | 5 cut(s) | 279, 369, 378, 783, 793 |
| Bbv12I | GWGCWC | 1 cut(s) | 492 |
| BbvI | GCAGC | 1 cut(s) | 877 |
| BccI | CCATC | 2 cut(s) | 190, 410 |
| BceAI | ACGGC | 3 cut(s) | 481, 530, 678 |
| BciT130I | CCWGG | 1 cut(s) | 917 |
| BclI | TGATCA | 1 cut(s) | 1024 |
| BcnI | CCSGG | 1 cut(s) | 773 |
| BcoDI | GTCTC | 2 cut(s) | 171, 809 |
| BcuI | ACTAGT | 1 cut(s) | 796 |
| BfaI | CTAG | 1 cut(s) | 797 |
| BfmI | CTRYAG | 1 cut(s) | 739 |
| BfoI | RGCGCY | 2 cut(s) | 612, 975 |
| BfuAI | ACCTGC | 1 cut(s) | 153 |
| BisI | GCNGC | 4 cut(s) | 6, 564, 567, 891 |
| BlsI | GCNGC | 4 cut(s) | 7, 565, 568, 892 |
| Bme1390I | CCNGG | 2 cut(s) | 773, 917 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 307, 454 |
| BmgBI | CACGTC | 1 cut(s) | 529 |
| BmgT120I | GGNCC | 4 cut(s) | 514, 535, 769, 770 |
| BmiI | GGNNCC | 4 cut(s) | 422, 610, 771, 973 |
| BmrFI | CCNGG | 2 cut(s) | 773, 917 |
| BmsI | GCATC | 3 cut(s) | 396, 837, 888 |
| BpiI | GAAGAC | 5 cut(s) | 279, 369, 378, 783, 793 |
| Bpu10I | CCTNAGC | 1 cut(s) | 619 |
| BpuEI | CTTGAG | 2 cut(s) | 575, 980 |
| BpuMI | CCSGG | 1 cut(s) | 773 |
| BsaBI | GATNNNNATC | 1 cut(s) | 16 |
| BsaHI | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| BsaI | GGTCTC | 2 cut(s) | 171, 809 |
| BsaJI | CCNNGG | 5 cut(s) | 459, 579, 654, 765, 916 |
| BsaWI | WCCGGW | 1 cut(s) | 1069 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 73, 103 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 811 |
| Bse118I | RCCGGY | 5 cut(s) | 352, 605, 947, 968, 974 |
| Bse1I | ACTGG | 1 cut(s) | 715 |
| Bse8I | GATNNNNATC | 1 cut(s) | 16 |
| BseBI | CCWGG | 1 cut(s) | 917 |
| BseDI | CCNNGG | 5 cut(s) | 459, 579, 654, 765, 916 |
| BseGI | GGATG | 1 cut(s) | 140 |
| BseJI | GATNNNNATC | 1 cut(s) | 16 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 811 |
| BseMII | CTCAG | 2 cut(s) | 633, 920 |
| BseNI | ACTGG | 1 cut(s) | 715 |
| BseRI | GAGGAG | 4 cut(s) | 16, 202, 315, 974 |
| BseSI | GKGCMC | 2 cut(s) | 662, 773 |
| BseXI | GCAGC | 1 cut(s) | 877 |
| Bsh1236I | CGCG | 1 cut(s) | 885 |
| Bsh1285I | CGRYCG | 1 cut(s) | 360 |
| BshFI | GGCC | 9 cut(s) | 5, 468, 482, 516, 536, 557, 665, 771, 876 |
| BshNI | GGYRCC | 2 cut(s) | 608, 971 |
| BsiEI | CGRYCG | 1 cut(s) | 360 |
| BsiHKAI | GWGCWC | 1 cut(s) | 492 |
| BslFI | GGGAC | 2 cut(s) | 301, 720 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 811 |
| BsmAI | GTCTC | 2 cut(s) | 171, 809 |
| BsmFI | GGGAC | 2 cut(s) | 301, 720 |
| BsnI | GGCC | 9 cut(s) | 5, 468, 482, 516, 536, 557, 665, 771, 876 |
| Bso31I | GGTCTC | 2 cut(s) | 171, 809 |
| Bsp120I | GGGCCC | 1 cut(s) | 769 |
| Bsp1286I | GDGCHC | 4 cut(s) | 423, 492, 662, 773 |
| Bsp143I | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| BspACI | CCGC | 7 cut(s) | 6, 179, 543, 564, 567, 624, 893 |
| BspANI | GGCC | 9 cut(s) | 5, 468, 482, 516, 536, 557, 665, 771, 876 |
| BspCNI | CTCAG | 2 cut(s) | 632, 919 |
| BspFNI | CGCG | 1 cut(s) | 885 |
| BspLI | GGNNCC | 4 cut(s) | 422, 610, 771, 973 |
| BspMI | ACCTGC | 1 cut(s) | 153 |
| BspPI | GGATC | 1 cut(s) | 1050 |
| BspQI | GCTCTTC | 1 cut(s) | 497 |
| BspT107I | GGYRCC | 2 cut(s) | 608, 971 |
| BspTNI | GGTCTC | 2 cut(s) | 171, 809 |
| BsrFI | RCCGGY | 5 cut(s) | 352, 605, 947, 968, 974 |
| BsrI | ACTGG | 1 cut(s) | 715 |
| BssAI | RCCGGY | 5 cut(s) | 352, 605, 947, 968, 974 |
| BssECI | CCNNGG | 5 cut(s) | 459, 579, 654, 765, 916 |
| BssMI | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| BssNI | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| BssSI | CACGAG | 2 cut(s) | 476, 878 |
| BssT1I | CCWWGG | 3 cut(s) | 459, 579, 654 |
| Bst2BI | CACGAG | 2 cut(s) | 476, 878 |
| Bst2UI | CCWGG | 1 cut(s) | 917 |
| Bst4CI | ACNGT | 2 cut(s) | 766, 985 |
| Bst6I | CTCTTC | 5 cut(s) | 130, 174, 196, 209, 497 |
| BstACI | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| BstC8I | GCNNGC | 4 cut(s) | 354, 903, 970, 976 |
| BstDEI | CTNAG | 4 cut(s) | 484, 619, 906, 1046 |
| BstDSI | CCRYGG | 1 cut(s) | 765 |
| BstEII | GGTNACC | 1 cut(s) | 937 |
| BstF5I | GGATG | 1 cut(s) | 140 |
| BstFNI | CGCG | 1 cut(s) | 885 |
| BstH2I | RGCGCY | 2 cut(s) | 612, 975 |
| BstHHI | GCGC | 4 cut(s) | 411, 611, 885, 974 |
| BstKTI | GATC | 8 cut(s) | 289, 360, 504, 762, 912, 1005, 1027, 1045 |
| BstMAI | GTCTC | 2 cut(s) | 171, 809 |
| BstMBI | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| BstMCI | CGRYCG | 1 cut(s) | 360 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 207, 542, 563, 615, 882 |
| BstNI | CCWGG | 1 cut(s) | 917 |
| BstNSI | RCATGY | 2 cut(s) | 523, 905 |
| BstPI | GGTNACC | 1 cut(s) | 937 |
| BstSCI | CCNGG | 2 cut(s) | 771, 915 |
| BstSFI | CTRYAG | 1 cut(s) | 739 |
| BstSLI | GKGCMC | 2 cut(s) | 662, 773 |
| BstUI | CGCG | 1 cut(s) | 885 |
| BstV1I | GCAGC | 1 cut(s) | 877 |
| BstV2I | GAAGAC | 5 cut(s) | 279, 369, 378, 783, 793 |
| BstX2I | RGATCY | 1 cut(s) | 1042 |
| BstYI | RGATCY | 1 cut(s) | 1042 |
| BsuRI | GGCC | 9 cut(s) | 5, 468, 482, 516, 536, 557, 665, 771, 876 |
| BtgI | CCRYGG | 1 cut(s) | 765 |
| BtrI | CACGTC | 1 cut(s) | 529 |
| BtsCI | GGATG | 1 cut(s) | 140 |
| BtsIMutI | CAGTG | 1 cut(s) | 990 |
| BveI | ACCTGC | 1 cut(s) | 153 |
| Cac8I | GCNNGC | 4 cut(s) | 354, 903, 970, 976 |
| CfoI | GCGC | 4 cut(s) | 411, 611, 885, 974 |
| Cfr10I | RCCGGY | 5 cut(s) | 352, 605, 947, 968, 974 |
| Cfr13I | GGNCC | 4 cut(s) | 514, 535, 769, 770 |
| CseI | GACGC | 5 cut(s) | 290, 458, 593, 866, 940 |
| Csp6I | GTAC | 1 cut(s) | 964 |
| CviAII | CATG | 4 cut(s) | 520, 902, 925, 955 |
| CviQI | GTAC | 1 cut(s) | 964 |
| DdeI | CTNAG | 4 cut(s) | 484, 619, 906, 1046 |
| DinI | GGCGCC | 2 cut(s) | 610, 973 |
| DpnI | GATC | 8 cut(s) | 288, 359, 503, 761, 911, 1004, 1026, 1044 |
| DpnII | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| DriI | GACNNNNNGTC | 2 cut(s) | 307, 454 |
| EaeI | YGGCCR | 2 cut(s) | 3, 663 |
| Eam1104I | CTCTTC | 5 cut(s) | 130, 174, 196, 209, 497 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 307, 454 |
| EarI | CTCTTC | 5 cut(s) | 130, 174, 196, 209, 497 |
| EciI | GGCGGA | 2 cut(s) | 168, 639 |
| Ecl136II | GAGCTC | 1 cut(s) | 490 |
| Eco130I | CCWWGG | 3 cut(s) | 459, 579, 654 |
| Eco147I | AGGCCT | 2 cut(s) | 482, 557 |
| Eco24I | GRGCYC | 3 cut(s) | 423, 492, 773 |
| Eco31I | GGTCTC | 2 cut(s) | 171, 809 |
| Eco53kI | GAGCTC | 1 cut(s) | 490 |
| Eco57I | CTGAAG | 1 cut(s) | 190 |
| Eco91I | GGTNACC | 1 cut(s) | 937 |
| EcoICRI | GAGCTC | 1 cut(s) | 490 |
| EcoO65I | GGTNACC | 1 cut(s) | 937 |
| EcoRII | CCWGG | 1 cut(s) | 915 |
| EcoT14I | CCWWGG | 3 cut(s) | 459, 579, 654 |
| EcoT22I | ATGCAT | 1 cut(s) | 903 |
| EcoT38I | GRGCYC | 3 cut(s) | 423, 492, 773 |
| EgeI | GGCGCC | 2 cut(s) | 610, 973 |
| EheI | GGCGCC | 2 cut(s) | 610, 973 |
| ErhI | CCWWGG | 3 cut(s) | 459, 579, 654 |
| FaeI | CATG | 4 cut(s) | 523, 905, 928, 958 |
| FaiI | YATR | 8 cut(s) | 156, 521, 647, 707, 903, 926, 956, 1016 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 584, 616 |
| FaqI | GGGAC | 2 cut(s) | 301, 720 |
| FatI | CATG | 4 cut(s) | 519, 901, 924, 954 |
| FbaI | TGATCA | 1 cut(s) | 1024 |
| FblI | GTMKAC | 2 cut(s) | 678, 711 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 564, 567, 891 |
| FokI | GGATG | 1 cut(s) | 127 |
| FriOI | GRGCYC | 3 cut(s) | 423, 492, 773 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 564, 567, 891 |
| FspAI | RTGCGCAY | 1 cut(s) | 410 |
| FspBI | CTAG | 1 cut(s) | 797 |
| FspI | TGCGCA | 1 cut(s) | 410 |
| GlaI | GCGC | 4 cut(s) | 410, 610, 884, 973 |
| GluI | GCNGC | 4 cut(s) | 6, 564, 567, 891 |
| HaeII | RGCGCY | 2 cut(s) | 612, 975 |
| HaeIII | GGCC | 9 cut(s) | 5, 468, 482, 516, 536, 557, 665, 771, 876 |
| HgaI | GACGC | 5 cut(s) | 290, 458, 593, 866, 940 |
| HhaI | GCGC | 4 cut(s) | 411, 611, 885, 974 |
| Hin1I | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| Hin1II | CATG | 4 cut(s) | 523, 905, 928, 958 |
| Hin6I | GCGC | 4 cut(s) | 409, 609, 883, 972 |
| HinP1I | GCGC | 4 cut(s) | 409, 609, 883, 972 |
| HincII | GTYRAC | 3 cut(s) | 598, 679, 712 |
| HindII | GTYRAC | 3 cut(s) | 598, 679, 712 |
| HindIII | AAGCTT | 2 cut(s) | 71, 1109 |
| HinfI | GANTC | 1 cut(s) | 1093 |
| HphI | GGTGA | 6 cut(s) | 58, 463, 595, 754, 949, 1043 |
| Hpy166II | GTNNAC | 4 cut(s) | 598, 679, 712, 988 |
| Hpy188I | TCNGA | 4 cut(s) | 217, 265, 291, 909 |
| Hpy188III | TCNNGA | 5 cut(s) | 439, 805, 847, 1006, 1090 |
| Hpy8I | GTNNAC | 4 cut(s) | 598, 679, 712, 988 |
| HpyAV | CCTTC | 6 cut(s) | 61, 147, 712, 802, 818, 1033 |
| HpyCH4III | ACNGT | 2 cut(s) | 766, 985 |
| HpyCH4IV | ACGT | 2 cut(s) | 528, 990 |
| HpyCH4V | TGCA | 3 cut(s) | 388, 434, 901 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 207, 542, 563, 615, 882 |
| HpyF3I | CTNAG | 4 cut(s) | 484, 619, 906, 1046 |
| HpySE526I | ACGT | 2 cut(s) | 528, 990 |
| Hsp92I | GRCGYC | 4 cut(s) | 282, 609, 951, 972 |
| Hsp92II | CATG | 4 cut(s) | 523, 905, 928, 958 |
| HspAI | GCGC | 4 cut(s) | 409, 609, 883, 972 |
| KasI | GGCGCC | 2 cut(s) | 608, 971 |
| KroI | GCCGGC | 3 cut(s) | 352, 968, 974 |
| KroNI | GCCGGC | 3 cut(s) | 354, 970, 976 |
| Ksp22I | TGATCA | 1 cut(s) | 1024 |
| Kzo9I | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| LguI | GCTCTTC | 1 cut(s) | 497 |
| LmnI | GCTCC | 6 cut(s) | 29, 94, 215, 426, 729, 749 |
| Lsp1109I | GCAGC | 1 cut(s) | 877 |
| LweI | GCATC | 3 cut(s) | 396, 837, 888 |
| MaeI | CTAG | 1 cut(s) | 797 |
| MaeII | ACGT | 2 cut(s) | 528, 990 |
| MaeIII | GTNAC | 2 cut(s) | 937, 1031 |
| MalI | GATC | 8 cut(s) | 288, 359, 503, 761, 911, 1004, 1026, 1044 |
| MboI | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| MflI | RGATCY | 1 cut(s) | 1042 |
| MhlI | GDGCHC | 4 cut(s) | 423, 492, 662, 773 |
| MluCI | AATT | 2 cut(s) | 247, 1083 |
| Mly113I | GGCGCC | 2 cut(s) | 609, 972 |
| MmeI | TCCRAC | 1 cut(s) | 288 |
| Mph1103I | ATGCAT | 1 cut(s) | 903 |
| MreI | CGCCGGCG | 1 cut(s) | 968 |
| MroNI | GCCGGC | 3 cut(s) | 352, 968, 974 |
| MseI | TTAA | 1 cut(s) | 1117 |
| MspR9I | CCNGG | 2 cut(s) | 773, 917 |
| MvaI | CCWGG | 1 cut(s) | 917 |
| MvnI | CGCG | 1 cut(s) | 885 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 207, 542, 563, 615, 882 |
| NaeI | GCCGGC | 3 cut(s) | 354, 970, 976 |
| NarI | GGCGCC | 2 cut(s) | 609, 972 |
| NciI | CCSGG | 1 cut(s) | 773 |
| NdeII | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| NgoMIV | GCCGGC | 3 cut(s) | 352, 968, 974 |
| NlaIII | CATG | 4 cut(s) | 523, 905, 928, 958 |
| NlaIV | GGNNCC | 4 cut(s) | 422, 610, 771, 973 |
| NmuCI | GTSAC | 2 cut(s) | 937, 1031 |
| NsbI | TGCGCA | 1 cut(s) | 410 |
| NsiI | ATGCAT | 1 cut(s) | 903 |
| NspI | RCATGY | 2 cut(s) | 523, 905 |
| PaeI | GCATGC | 1 cut(s) | 905 |
| PceI | AGGCCT | 2 cut(s) | 482, 557 |
| PciSI | GCTCTTC | 1 cut(s) | 497 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 273, 276, 282 |
| PdiI | GCCGGC | 3 cut(s) | 354, 970, 976 |
| PfeI | GAWTC | 1 cut(s) | 1093 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 811 |
| PkrI | GCNGC | 4 cut(s) | 7, 565, 568, 892 |
| Ple19I | CGATCG | 1 cut(s) | 360 |
| PluTI | GGCGCC | 2 cut(s) | 612, 975 |
| Psp124BI | GAGCTC | 1 cut(s) | 492 |
| Psp6I | CCWGG | 1 cut(s) | 915 |
| PspEI | GGTNACC | 1 cut(s) | 937 |
| PspGI | CCWGG | 1 cut(s) | 915 |
| PspN4I | GGNNCC | 4 cut(s) | 422, 610, 771, 973 |
| PspOMI | GGGCCC | 1 cut(s) | 769 |
| PspPI | GGNCC | 4 cut(s) | 514, 535, 769, 770 |
| PsuI | RGATCY | 1 cut(s) | 1042 |
| PvuI | CGATCG | 1 cut(s) | 360 |
| RsaI | GTAC | 1 cut(s) | 965 |
| RsaNI | GTAC | 1 cut(s) | 964 |
| SacI | GAGCTC | 1 cut(s) | 492 |
| SalI | GTCGAC | 2 cut(s) | 677, 710 |
| SapI | GCTCTTC | 1 cut(s) | 497 |
| SaqAI | TTAA | 1 cut(s) | 1117 |
| SatI | GCNGC | 4 cut(s) | 6, 564, 567, 891 |
| Sau3AI | GATC | 8 cut(s) | 286, 357, 501, 759, 909, 1002, 1024, 1042 |
| Sau96I | GGNCC | 4 cut(s) | 514, 535, 769, 770 |
| ScrFI | CCNGG | 2 cut(s) | 773, 917 |
| SduI | GDGCHC | 4 cut(s) | 423, 492, 662, 773 |
| SfaNI | GCATC | 3 cut(s) | 396, 837, 888 |
| SfcI | CTRYAG | 1 cut(s) | 739 |
| SfoI | GGCGCC | 2 cut(s) | 610, 973 |
| SgrAI | CRCCGGYG | 3 cut(s) | 605, 947, 968 |
| SmlI | CTYRAG | 2 cut(s) | 590, 995 |
| SmoI | CTYRAG | 2 cut(s) | 590, 995 |
| SpeI | ACTAGT | 1 cut(s) | 796 |
| SphI | GCATGC | 1 cut(s) | 905 |
| Sse9I | AATT | 2 cut(s) | 247, 1083 |
| SseBI | AGGCCT | 2 cut(s) | 482, 557 |
| SsiI | CCGC | 7 cut(s) | 6, 179, 543, 564, 567, 624, 893 |
| SspDI | GGCGCC | 2 cut(s) | 608, 971 |
| SspMI | CTAG | 1 cut(s) | 797 |
| SstI | GAGCTC | 1 cut(s) | 492 |
| StuI | AGGCCT | 2 cut(s) | 482, 557 |
| StyD4I | CCNGG | 2 cut(s) | 771, 915 |
| StyI | CCWWGG | 3 cut(s) | 459, 579, 654 |
| TaaI | ACNGT | 2 cut(s) | 766, 985 |
| TaiI | ACGT | 2 cut(s) | 531, 993 |
| TaqI | TCGA | 7 cut(s) | 360, 447, 552, 678, 711, 855, 912 |
| TasI | AATT | 2 cut(s) | 247, 1083 |
| TauI | GCSGC | 3 cut(s) | 8, 566, 569 |
| TfiI | GAWTC | 1 cut(s) | 1093 |
| Tru1I | TTAA | 1 cut(s) | 1117 |
| Tru9I | TTAA | 1 cut(s) | 1117 |
| TscAI | CASTG | 1 cut(s) | 990 |
| TseFI | GTSAC | 2 cut(s) | 937, 1031 |
| TseI | GCWGC | 1 cut(s) | 890 |
| Tsp45I | GTSAC | 2 cut(s) | 937, 1031 |
| TspDTI | ATGAA | 3 cut(s) | 129, 694, 913 |
| TspGWI | ACGGA | 1 cut(s) | 800 |
| TspRI | CASTG | 1 cut(s) | 990 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 811 |
| XapI | RAATTY | 1 cut(s) | 1083 |
| XceI | RCATGY | 2 cut(s) | 523, 905 |
| XmiI | GTMKAC | 2 cut(s) | 678, 711 |
| XspI | CTAG | 1 cut(s) | 797 |
| Zsp2I | ATGCAT | 1 cut(s) | 903 |