Vesicle-associated protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g04180 FvH4_6g04180 FvH4_6g04180 FvH4_6g04180 FvH4_6g04180 FvH4_6g04180 FvH4_6g04180 |
| malus_domestica | MD00G1052100.v1.1 MD12G1230200.v1.1 |
| prunus_persica | Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335400_v2.0.a1 Prupe.6G335500_v2.0.a1 |
| pyrus_communis | pycom04g19010 pycom12g21400 |
| rosa_chinensis | RchiOBHm_Chr0c30g0501241 RchiOBHm_Chr0c30g0501251 RchiOBHm_Chr3g0452761 RchiOBHm_Chr3g0452781 |
| rosa_laevigata | RLG00000025570 |
| rosa_multiflora | Rmu_ssc0000156.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00429760 |
| rosa_rugosa | Rorug02G0643000 |
| rosa_samantha | Rh3AG045200 Rh3BG047700 Rh3CG046200 Rh3DG046500 |
| rosa_wichuraiana | Rw3G003560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 414 |
| AccII | CGCG | 1 cut(s) | 299 |
| AciI | CCGC | 1 cut(s) | 299 |
| AcsI | RAATTY | 3 cut(s) | 7, 194, 853 |
| AcuI | CTGAAG | 1 cut(s) | 948 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 164 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AjiI | CACGTC | 1 cut(s) | 96 |
| AjnI | CCWGG | 1 cut(s) | 921 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 503, 535 |
| AoxI | GGCC | 1 cut(s) | 689 |
| ApoI | RAATTY | 3 cut(s) | 7, 194, 853 |
| AsuHPI | GGTGA | 2 cut(s) | 393, 580 |
| AsuNHI | GCTAGC | 1 cut(s) | 311 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 552, 585 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 432, 464 |
| BccI | CCATC | 2 cut(s) | 559, 796 |
| BciT130I | CCWGG | 1 cut(s) | 923 |
| BciVI | GTATCC | 1 cut(s) | 553 |
| BclI | TGATCA | 1 cut(s) | 457 |
| BfaI | CTAG | 2 cut(s) | 312, 812 |
| BfuI | GTATCC | 1 cut(s) | 553 |
| BlpI | GCTNAGC | 1 cut(s) | 917 |
| Bme1390I | CCNGG | 1 cut(s) | 923 |
| BmgBI | CACGTC | 1 cut(s) | 96 |
| BmiI | GGNNCC | 2 cut(s) | 714, 762 |
| BmrFI | CCNGG | 1 cut(s) | 923 |
| BmsI | GCATC | 1 cut(s) | 978 |
| BmtI | GCTAGC | 1 cut(s) | 315 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 917 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 164 |
| Bse1I | ACTGG | 1 cut(s) | 740 |
| Bse3DI | GCAATG | 1 cut(s) | 442 |
| BseBI | CCWGG | 1 cut(s) | 923 |
| BseGI | GGATG | 5 cut(s) | 25, 131, 517, 712, 969 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 164 |
| BseMI | GCAATG | 1 cut(s) | 442 |
| BseMII | CTCAG | 2 cut(s) | 555, 908 |
| BseNI | ACTGG | 1 cut(s) | 740 |
| BseRI | GAGGAG | 4 cut(s) | 554, 626, 893, 968 |
| Bsh1236I | CGCG | 1 cut(s) | 299 |
| BshFI | GGCC | 1 cut(s) | 691 |
| BslFI | GGGAC | 1 cut(s) | 301 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 164 |
| BsmFI | GGGAC | 1 cut(s) | 301 |
| BsnI | GGCC | 1 cut(s) | 691 |
| Bsp143I | GATC | 1 cut(s) | 457 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 917 |
| BspACI | CCGC | 1 cut(s) | 299 |
| BspANI | GGCC | 1 cut(s) | 691 |
| BspCNI | CTCAG | 2 cut(s) | 556, 909 |
| BspFNI | CGCG | 1 cut(s) | 299 |
| BspLI | GGNNCC | 2 cut(s) | 714, 762 |
| BspOI | GCTAGC | 1 cut(s) | 315 |
| BsrDI | GCAATG | 1 cut(s) | 442 |
| BsrI | ACTGG | 1 cut(s) | 740 |
| BssMI | GATC | 1 cut(s) | 457 |
| Bst2UI | CCWGG | 1 cut(s) | 923 |
| Bst4CI | ACNGT | 1 cut(s) | 149 |
| Bst6I | CTCTTC | 2 cut(s) | 342, 603 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 674 |
| BstC8I | GCNNGC | 2 cut(s) | 213, 313 |
| BstDEI | CTNAG | 4 cut(s) | 359, 564, 599, 917 |
| BstF5I | GGATG | 5 cut(s) | 25, 131, 517, 712, 969 |
| BstFNI | CGCG | 1 cut(s) | 299 |
| BstKTI | GATC | 1 cut(s) | 460 |
| BstMBI | GATC | 1 cut(s) | 457 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 674, 836 |
| BstNI | CCWGG | 1 cut(s) | 923 |
| BstNSI | RCATGY | 2 cut(s) | 319, 587 |
| BstSCI | CCNGG | 1 cut(s) | 921 |
| BstUI | CGCG | 1 cut(s) | 299 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 586, 727 |
| BsuI | GTATCC | 1 cut(s) | 553 |
| BsuRI | GGCC | 1 cut(s) | 691 |
| BtrI | CACGTC | 1 cut(s) | 96 |
| BtsCI | GGATG | 5 cut(s) | 25, 131, 517, 712, 969 |
| Cac8I | GCNNGC | 2 cut(s) | 213, 313 |
| CseI | GACGC | 1 cut(s) | 305 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 615, 650 |
| CviAII | CATG | 4 cut(s) | 72, 107, 316, 584 |
| DdeI | CTNAG | 4 cut(s) | 359, 564, 599, 917 |
| DpnI | GATC | 1 cut(s) | 459 |
| DpnII | GATC | 1 cut(s) | 457 |
| Eam1104I | CTCTTC | 2 cut(s) | 342, 603 |
| EarI | CTCTTC | 2 cut(s) | 342, 603 |
| Eco57I | CTGAAG | 1 cut(s) | 948 |
| EcoRI | GAATTC | 1 cut(s) | 7 |
| EcoRII | CCWGG | 1 cut(s) | 921 |
| FaeI | CATG | 4 cut(s) | 75, 110, 319, 587 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 401, 433 |
| FaqI | GGGAC | 1 cut(s) | 301 |
| FatI | CATG | 4 cut(s) | 71, 106, 315, 583 |
| FauI | CCCGC | 1 cut(s) | 292 |
| FauNDI | CATATG | 1 cut(s) | 697 |
| FbaI | TGATCA | 1 cut(s) | 457 |
| FblI | GTMKAC | 1 cut(s) | 414 |
| FokI | GGATG | 5 cut(s) | 12, 118, 524, 719, 956 |
| FspBI | CTAG | 2 cut(s) | 312, 812 |
| HaeIII | GGCC | 1 cut(s) | 691 |
| HgaI | GACGC | 1 cut(s) | 305 |
| Hin1II | CATG | 4 cut(s) | 75, 110, 319, 587 |
| HindIII | AAGCTT | 1 cut(s) | 441 |
| HinfI | GANTC | 4 cut(s) | 22, 386, 542, 683 |
| HphI | GGTGA | 2 cut(s) | 393, 580 |
| Hpy166II | GTNNAC | 1 cut(s) | 415 |
| Hpy188I | TCNGA | 3 cut(s) | 100, 524, 793 |
| Hpy8I | GTNNAC | 1 cut(s) | 415 |
| HpyCH4III | ACNGT | 1 cut(s) | 149 |
| HpyCH4IV | ACGT | 2 cut(s) | 95, 342 |
| HpyCH4V | TGCA | 3 cut(s) | 211, 246, 991 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 674, 836 |
| HpyF3I | CTNAG | 4 cut(s) | 359, 564, 599, 917 |
| HpySE526I | ACGT | 2 cut(s) | 95, 342 |
| Hsp92II | CATG | 4 cut(s) | 75, 110, 319, 587 |
| Ksp22I | TGATCA | 1 cut(s) | 457 |
| Kzo9I | GATC | 1 cut(s) | 457 |
| LweI | GCATC | 1 cut(s) | 978 |
| MaeI | CTAG | 2 cut(s) | 312, 812 |
| MaeII | ACGT | 2 cut(s) | 95, 342 |
| MaeIII | GTNAC | 4 cut(s) | 202, 399, 502, 931 |
| MalI | GATC | 1 cut(s) | 459 |
| MboI | GATC | 1 cut(s) | 457 |
| MboII | GAAGA | 4 cut(s) | 70, 273, 359, 620 |
| MfeI | CAATTG | 1 cut(s) | 273 |
| MlyI | GAGTC | 2 cut(s) | 551, 692 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MseI | TTAA | 4 cut(s) | 117, 123, 260, 867 |
| MspR9I | CCNGG | 1 cut(s) | 923 |
| MunI | CAATTG | 1 cut(s) | 273 |
| MvaI | CCWGG | 1 cut(s) | 923 |
| MvnI | CGCG | 1 cut(s) | 299 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 674, 836 |
| NdeI | CATATG | 1 cut(s) | 697 |
| NdeII | GATC | 1 cut(s) | 457 |
| NheI | GCTAGC | 1 cut(s) | 311 |
| NlaIII | CATG | 4 cut(s) | 75, 110, 319, 587 |
| NlaIV | GGNNCC | 2 cut(s) | 714, 762 |
| NmuCI | GTSAC | 1 cut(s) | 399 |
| NspI | RCATGY | 2 cut(s) | 319, 587 |
| PfeI | GAWTC | 2 cut(s) | 22, 386 |
| PleI | GAGTC | 2 cut(s) | 550, 691 |
| PpsI | GAGTC | 2 cut(s) | 550, 691 |
| Psp6I | CCWGG | 1 cut(s) | 921 |
| PspGI | CCWGG | 1 cut(s) | 921 |
| PspN4I | GGNNCC | 2 cut(s) | 714, 762 |
| SaqAI | TTAA | 4 cut(s) | 117, 123, 260, 867 |
| Sau3AI | GATC | 1 cut(s) | 457 |
| SchI | GAGTC | 2 cut(s) | 551, 692 |
| ScrFI | CCNGG | 1 cut(s) | 923 |
| SfaNI | GCATC | 1 cut(s) | 978 |
| SsiI | CCGC | 1 cut(s) | 299 |
| SspMI | CTAG | 2 cut(s) | 312, 812 |
| StyD4I | CCNGG | 1 cut(s) | 921 |
| TaaI | ACNGT | 1 cut(s) | 149 |
| TaiI | ACGT | 2 cut(s) | 98, 345 |
| TaqI | TCGA | 1 cut(s) | 82 |
| TfiI | GAWTC | 2 cut(s) | 22, 386 |
| Tru1I | TTAA | 4 cut(s) | 117, 123, 260, 867 |
| Tru9I | TTAA | 4 cut(s) | 117, 123, 260, 867 |
| TseFI | GTSAC | 1 cut(s) | 399 |
| Tsp45I | GTSAC | 1 cut(s) | 399 |
| TspDTI | ATGAA | 5 cut(s) | 14, 20, 34, 453, 899 |
| TspGWI | ACGGA | 1 cut(s) | 719 |
| XapI | RAATTY | 3 cut(s) | 7, 194, 853 |
| XceI | RCATGY | 2 cut(s) | 319, 587 |
| XmiI | GTMKAC | 1 cut(s) | 414 |
| XspI | CTAG | 2 cut(s) | 312, 812 |