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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000395.1_g000018 Rmu_sc0000920.1_g000016 |
| rosa_samantha | Rh2BG339000 Rh3AG309300 Rh3BG345400 Rh3BG345500 Rh3CG342600 Rh4AG082000 Rh4AG111200 Rh4CG089500 Rh6AG167200 |
| rosa_wichuraiana | Rw4G006840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 153, 370 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 34 |
| AgsI | TTSAA | 2 cut(s) | 241, 316 |
| AjnI | CCWGG | 1 cut(s) | 157 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 179, 211 |
| AoxI | GGCC | 1 cut(s) | 438 |
| BauI | CACGAG | 1 cut(s) | 18 |
| BccI | CCATC | 2 cut(s) | 100, 200 |
| BciT130I | CCWGG | 1 cut(s) | 159 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| BmiI | GGNNCC | 1 cut(s) | 123 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BmrI | ACTGGG | 2 cut(s) | 422, 429 |
| BmuI | ACTGGG | 2 cut(s) | 422, 429 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| BsaJI | CCNNGG | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 34 |
| Bse1I | ACTGG | 2 cut(s) | 417, 424 |
| BseBI | CCWGG | 1 cut(s) | 159 |
| BseDI | CCNNGG | 1 cut(s) | 116 |
| BseGI | GGATG | 1 cut(s) | 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BseNI | ACTGG | 2 cut(s) | 417, 424 |
| BshFI | GGCC | 1 cut(s) | 440 |
| BslFI | GGGAC | 1 cut(s) | 430 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BsmFI | GGGAC | 1 cut(s) | 430 |
| BsnI | GGCC | 1 cut(s) | 440 |
| Bsp1407I | TGTACA | 1 cut(s) | 368 |
| BspANI | GGCC | 1 cut(s) | 440 |
| BspLI | GGNNCC | 1 cut(s) | 123 |
| BspQI | GCTCTTC | 1 cut(s) | 236 |
| BsrGI | TGTACA | 1 cut(s) | 368 |
| BsrI | ACTGG | 2 cut(s) | 417, 424 |
| BssECI | CCNNGG | 1 cut(s) | 116 |
| BssSI | CACGAG | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 1 cut(s) | 116 |
| Bst2BI | CACGAG | 1 cut(s) | 18 |
| Bst2UI | CCWGG | 1 cut(s) | 159 |
| Bst4CI | ACNGT | 2 cut(s) | 265, 387 |
| Bst6I | CTCTTC | 1 cut(s) | 236 |
| BstAUI | TGTACA | 1 cut(s) | 368 |
| BstC8I | GCNNGC | 1 cut(s) | 442 |
| BstF5I | GGATG | 1 cut(s) | 208 |
| BstNI | CCWGG | 1 cut(s) | 159 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 440 |
| BtsCI | GGATG | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 1 cut(s) | 442 |
| Csp6I | GTAC | 2 cut(s) | 152, 369 |
| CviAII | CATG | 1 cut(s) | 297 |
| CviJI | RGCY | 2 cut(s) | 145, 440 |
| CviKI_1 | RGCY | 2 cut(s) | 145, 440 |
| CviQI | GTAC | 2 cut(s) | 152, 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 236 |
| EarI | CTCTTC | 1 cut(s) | 236 |
| Eco130I | CCWWGG | 1 cut(s) | 116 |
| Eco147I | AGGCCT | 1 cut(s) | 440 |
| EcoRII | CCWGG | 1 cut(s) | 157 |
| EcoT14I | CCWWGG | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 116 |
| FaeI | CATG | 1 cut(s) | 300 |
| FaiI | YATR | 3 cut(s) | 67, 225, 298 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 109, 141 |
| FaqI | GGGAC | 1 cut(s) | 430 |
| FatI | CATG | 1 cut(s) | 296 |
| FokI | GGATG | 1 cut(s) | 215 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| HaeIII | GGCC | 1 cut(s) | 440 |
| Hin1II | CATG | 1 cut(s) | 300 |
| HincII | GTYRAC | 2 cut(s) | 25, 132 |
| HindII | GTYRAC | 2 cut(s) | 25, 132 |
| HinfI | GANTC | 2 cut(s) | 21, 110 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 132 |
| Hpy188III | TCNNGA | 1 cut(s) | 359 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 132 |
| HpyAV | CCTTC | 2 cut(s) | 181, 430 |
| HpyCH4III | ACNGT | 2 cut(s) | 265, 387 |
| Hsp92II | CATG | 1 cut(s) | 300 |
| LguI | GCTCTTC | 1 cut(s) | 236 |
| LmnI | GCTCC | 1 cut(s) | 281 |
| LpnPI | CCDG | 7 cut(s) | 144, 171, 372, 398, 405, 454, 458 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MboII | GAAGA | 3 cut(s) | 22, 253, 280 |
| MluCI | AATT | 1 cut(s) | 193 |
| MlyI | GAGTC | 1 cut(s) | 30 |
| MnlI | CCTC | 2 cut(s) | 165, 417 |
| MseI | TTAA | 2 cut(s) | 87, 407 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| MvaI | CCWGG | 1 cut(s) | 159 |
| NlaIII | CATG | 1 cut(s) | 300 |
| NlaIV | GGNNCC | 1 cut(s) | 123 |
| PceI | AGGCCT | 1 cut(s) | 440 |
| PciSI | GCTCTTC | 1 cut(s) | 236 |
| PfeI | GAWTC | 1 cut(s) | 110 |
| PfoI | TCCNGGA | 1 cut(s) | 157 |
| PleI | GAGTC | 1 cut(s) | 29 |
| PpsI | GAGTC | 1 cut(s) | 29 |
| Psp6I | CCWGG | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 1 cut(s) | 123 |
| RsaI | GTAC | 2 cut(s) | 153, 370 |
| RsaNI | GTAC | 2 cut(s) | 152, 369 |
| SapI | GCTCTTC | 1 cut(s) | 236 |
| SaqAI | TTAA | 2 cut(s) | 87, 407 |
| SchI | GAGTC | 1 cut(s) | 30 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SetI | ASST | 4 cut(s) | 81, 127, 157, 184 |
| Sse9I | AATT | 1 cut(s) | 193 |
| SseBI | AGGCCT | 1 cut(s) | 440 |
| SspI | AATATT | 1 cut(s) | 236 |
| StuI | AGGCCT | 1 cut(s) | 440 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| StyI | CCWWGG | 1 cut(s) | 116 |
| TaaI | ACNGT | 2 cut(s) | 265, 387 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 1 cut(s) | 193 |
| TatI | WGTACW | 1 cut(s) | 368 |
| TfiI | GAWTC | 1 cut(s) | 110 |
| Tru1I | TTAA | 2 cut(s) | 87, 407 |
| Tru9I | TTAA | 2 cut(s) | 87, 407 |
| TspDTI | ATGAA | 3 cut(s) | 246, 280, 449 |