Rh4CG089500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
16048968 .. 16069239
20272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG089500.1

Sequence Viewer

Length: 246 bp
ATGAACAGGAAGCTTCAGCGTGGTGGAATCAGAGCGAAACCCAATTCATGGACTCTTCGGCTATTCGCAGTCTTCATCTCATGTTCTGCTACTTGCTTCAACGCATTTACAATAGGAGTTAGACAGCAGATAATACAACTTCCAGAGTTCTGTACAGAACACGATAGACCGTTGATAAACCACACACCATTAAAACTGGGGACTGGGAGGACGACAATGAAGGCCTGCCAGAATGAAAAGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

81

Amino Acids

9.19

Weight (kDa)

10.22

Isoelectric Point (pI)

31.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 48
AfaI GTAC 1 cut(s) 154
AfiI CCNNNNNNNGG 1 cut(s) 48
AgsI TTSAA 1 cut(s) 100
AluBI AGCT 1 cut(s) 13
AluI AGCT 1 cut(s) 13
AoxI GGCC 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 64
BmrI ACTGGG 2 cut(s) 206, 213
BmuI ACTGGG 2 cut(s) 206, 213
BpiI GAAGAC 1 cut(s) 64
Bsc4I CCNNNNNNNGG 1 cut(s) 48
Bse1I ACTGG 2 cut(s) 201, 208
BseLI CCNNNNNNNGG 1 cut(s) 48
BseNI ACTGG 2 cut(s) 201, 208
BshFI GGCC 1 cut(s) 224
BslFI GGGAC 1 cut(s) 214
BslI CCNNNNNNNGG 1 cut(s) 48
BsmFI GGGAC 1 cut(s) 214
BsnI GGCC 1 cut(s) 224
Bsp1407I TGTACA 1 cut(s) 152
BspANI GGCC 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 152
BsrI ACTGG 2 cut(s) 201, 208
Bst4CI ACNGT 1 cut(s) 171
Bst6I CTCTTC 1 cut(s) 60
BstAUI TGTACA 1 cut(s) 152
BstC8I GCNNGC 1 cut(s) 226
BstV2I GAAGAC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 224
Cac8I GCNNGC 1 cut(s) 226
Csp6I GTAC 1 cut(s) 153
CviAII CATG 2 cut(s) 48, 81
CviJI RGCY 3 cut(s) 13, 61, 224
CviKI_1 RGCY 3 cut(s) 13, 61, 224
CviQI GTAC 1 cut(s) 153
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
Eco147I AGGCCT 1 cut(s) 224
FaeI CATG 2 cut(s) 51, 84
FaiI YATR 2 cut(s) 49, 82
FaqI GGGAC 1 cut(s) 214
FatI CATG 2 cut(s) 47, 80
HaeIII GGCC 1 cut(s) 224
Hin1II CATG 2 cut(s) 51, 84
HindIII AAGCTT 1 cut(s) 11
HinfI GANTC 2 cut(s) 27, 52
Hpy188I TCNGA 1 cut(s) 32
Hpy188III TCNNGA 1 cut(s) 143
HpyAV CCTTC 1 cut(s) 214
HpyCH4III ACNGT 1 cut(s) 171
Hsp92II CATG 2 cut(s) 51, 84
LpnPI CCDG 5 cut(s) 156, 182, 189, 238, 242
MboII GAAGA 2 cut(s) 47, 64
MluCI AATT 1 cut(s) 43
MlyI GAGTC 1 cut(s) 46
MnlI CCTC 1 cut(s) 201
MseI TTAA 1 cut(s) 191
NlaIII CATG 2 cut(s) 51, 84
PceI AGGCCT 1 cut(s) 224
PfeI GAWTC 1 cut(s) 27
PflMI CCANNNNNTGG 1 cut(s) 48
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
RsaI GTAC 1 cut(s) 154
RsaNI GTAC 1 cut(s) 153
SaqAI TTAA 1 cut(s) 191
SchI GAGTC 1 cut(s) 46
SetI ASST 1 cut(s) 15
Sse9I AATT 1 cut(s) 43
SseBI AGGCCT 1 cut(s) 224
StuI AGGCCT 1 cut(s) 224
TaaI ACNGT 1 cut(s) 171
TasI AATT 1 cut(s) 43
TatI WGTACW 1 cut(s) 152
TfiI GAWTC 1 cut(s) 27
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TspDTI ATGAA 4 cut(s) 17, 36, 64, 233
Van91I CCANNNNNTGG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.