Rh4AG165700

Heme-binding-like protein At3g10130

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
41811726 .. 41812027
302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG165700.1

Sequence Viewer

Length: 189 bp
ATGGCCGCCAACCGCGCCGCCGTATCTTCTCCGCCGCAGCGAAGAAGGACCATGTCCGCTCTCGAAGCCCGAATCTCTCTCGTCGCTGCTCTCGCCATCCAAGCCTCCTCCATCTCCCATTTTACTCGATTTGGCCACCAAGACAGCCAAGTACATCTTCTCCAAGCAGTTCGAGGCTCGAACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

62

Amino Acids

6.66

Weight (kDa)

12.0

Isoelectric Point (pI)

67.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 59
AccII CGCG 1 cut(s) 15
AciI CCGC 6 cut(s) 6, 13, 18, 32, 35, 57
AcoI YGGCCR 2 cut(s) 3, 133
AfaI GTAC 1 cut(s) 153
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AoxI GGCC 2 cut(s) 3, 133
ApeKI GCWGC 2 cut(s) 37, 86
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 1 cut(s) 48
AvaII GGWCC 1 cut(s) 48
BalI TGGCCA 1 cut(s) 135
BbvI GCAGC 2 cut(s) 49, 73
BccI CCATC 2 cut(s) 104, 119
BceAI ACGGC 1 cut(s) 5
BisI GCNGC 5 cut(s) 6, 18, 35, 38, 87
BlsI GCNGC 5 cut(s) 7, 19, 36, 39, 88
Bme18I GGWCC 1 cut(s) 48
BmgT120I GGNCC 1 cut(s) 48
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
BseGI GGATG 1 cut(s) 96
BseRI GAGGAG 1 cut(s) 97
BseXI GCAGC 2 cut(s) 49, 73
Bsh1236I CGCG 1 cut(s) 15
BshFI GGCC 2 cut(s) 5, 135
BsnI GGCC 2 cut(s) 5, 135
BspACI CCGC 6 cut(s) 6, 13, 18, 32, 35, 57
BspANI GGCC 2 cut(s) 5, 135
BspFNI CGCG 1 cut(s) 15
BsrBI CCGCTC 1 cut(s) 59
BstF5I GGATG 1 cut(s) 96
BstFNI CGCG 1 cut(s) 15
BstHHI GCGC 1 cut(s) 17
BstMWI GCNNNNNNNGC 4 cut(s) 14, 65, 92, 101
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 2 cut(s) 49, 73
BsuRI GGCC 2 cut(s) 5, 135
BtsCI GGATG 1 cut(s) 96
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 1 cut(s) 48
Csp6I GTAC 1 cut(s) 152
CviAII CATG 1 cut(s) 52
CviJI RGCY 6 cut(s) 5, 68, 104, 135, 147, 177
CviKI_1 RGCY 6 cut(s) 5, 68, 104, 135, 147, 177
CviQI GTAC 1 cut(s) 152
EaeI YGGCCR 2 cut(s) 3, 133
EciI GGCGGA 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 48
FaeI CATG 1 cut(s) 55
FaiI YATR 1 cut(s) 53
FalI AAGNNNNNCTT 2 cut(s) 141, 173
FatI CATG 1 cut(s) 51
Fnu4HI GCNGC 5 cut(s) 6, 18, 35, 38, 87
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 5 cut(s) 6, 18, 35, 38, 87
GlaI GCGC 1 cut(s) 16
GluI GCNGC 5 cut(s) 6, 18, 35, 38, 87
HaeIII GGCC 2 cut(s) 5, 135
HhaI GCGC 1 cut(s) 17
Hin1II CATG 1 cut(s) 55
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HinfI GANTC 1 cut(s) 72
Hpy188III TCNNGA 2 cut(s) 62, 186
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 1 cut(s) 39
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 65, 92, 101
Hsp92II CATG 1 cut(s) 55
HspAI GCGC 1 cut(s) 15
Lsp1109I GCAGC 2 cut(s) 49, 73
MbiI CCGCTC 1 cut(s) 59
MboII GAAGA 3 cut(s) 18, 54, 149
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MnlI CCTC 3 cut(s) 115, 118, 167
Mox20I TGGCCA 1 cut(s) 135
MscI TGGCCA 1 cut(s) 135
Msp20I TGGCCA 1 cut(s) 135
MvnI CGCG 1 cut(s) 15
MwoI GCNNNNNNNGC 4 cut(s) 14, 65, 92, 101
NlaIII CATG 1 cut(s) 55
PfeI GAWTC 1 cut(s) 72
PflFI GACNNNGTC 1 cut(s) 52
PkrI GCNGC 5 cut(s) 7, 19, 36, 39, 88
PspPI GGNCC 1 cut(s) 48
PsyI GACNNNGTC 1 cut(s) 52
RsaI GTAC 1 cut(s) 153
RsaNI GTAC 1 cut(s) 152
SatI GCNGC 5 cut(s) 6, 18, 35, 38, 87
Sau96I GGNCC 1 cut(s) 48
SinI GGWCC 1 cut(s) 48
SsiI CCGC 6 cut(s) 6, 13, 18, 32, 35, 57
TaqI TCGA 4 cut(s) 63, 127, 172, 179
TatI WGTACW 1 cut(s) 151
TauI GCSGC 3 cut(s) 8, 20, 37
TfiI GAWTC 1 cut(s) 72
TseI GCWGC 2 cut(s) 37, 86
Tth111I GACNNNGTC 1 cut(s) 52
VpaK11BI GGWCC 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.